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Items: 1 to 50 of 62

1.

Posttranslational modification of the NADP-malic enzyme involved in C4 photosynthesis fine-tunes the enzymatic activity during the day.

Bovdilova A, Alexandre BM, Höppner A, Matias Luís I, Alvarez CE, Bickel D, Gohlke H, Decker C, Nagel-Steger L, Alseekh S, Fernie AR, Drincovich MF, Abreu IA, Maurino VG.

Plant Cell. 2019 Jul 30. pii: tpc.00406.2019. doi: 10.1105/tpc.19.00406. [Epub ahead of print]

PMID:
31363039
2.

Estimating the local false discovery rate via a bootstrap solution to the reference class problem.

Abbas-Aghababazadeh F, Alvo M, Bickel DR.

PLoS One. 2018 Nov 26;13(11):e0206902. doi: 10.1371/journal.pone.0206902. eCollection 2018.

3.

Scorpiurus aramoana (Diptera: Dolichopodidae), a new species from New Zealand.

Bickel DJ, Kerr DS.

Zootaxa. 2018 May 22;4422(1):78-84. doi: 10.11646/zootaxa.4422.1.4.

PMID:
30313512
4.

Comprehensive inventory of true flies (Diptera) at a tropical site.

Brown BV, Borkent A, Adler PH, Amorim DS, Barber K, Bickel D, Boucher S, Brooks SE, Burger J, Burington ZL, Capellari RS, Costa DNR, Cumming JM, Curler G, Dick CW, Epler JH, Fisher E, Gaimari SD, Gelhaus J, Grimaldi DA, Hash J, Hauser M, Hippa H, Ibáñez-Bernal S, Jaschhof M, Kameneva EP, Kerr PH, Korneyev V, Korytkowski CA, Kung GA, Kvifte GM, Lonsdale O, Marshall SA, Mathis W, Michelsen V, Naglis S, Norrbom AL, Paiero S, Pape T, Pereira-Colavite A, Pollet M, Rochefort S, Rung A, Runyon JB, Savage J, Silva VC, Sinclair BJ, Skevington JH, Stireman Iii JO, Swann J, Thompson FC, Vilkamaa P, Wheeler T, Whitworth T, Wong M, Wood DM, Woodley N, Yau T, Zavortink TJ, Zumbado MA.

Commun Biol. 2018 Mar 22;1:21. doi: 10.1038/s42003-018-0022-x. eCollection 2018.

5.

Incorporating prior knowledge about genetic variants into the analysis of genetic association data: An empirical Bayes approach.

Karimnezhad A, Bickel DR.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Aug 14. doi: 10.1109/TCBB.2018.2865420. [Epub ahead of print]

PMID:
30113898
6.

Remarkable fly (Diptera) diversity in a patch of Costa Rican cloud forest: Why inventory is a vital science.

Borkent A, Brown BV, Adler PH, Amorim DS, Barber K, Bickel D, Boucher S, Brooks SE, Burger J, Burington ZL, Capellari RS, Costa DNR, Cumming JM, Curler G, Dick CW, Epler JH, Fisher E, Gaimari SD, Gelhaus J, Grimaldi DA, Hash J, Hauser M, Hippa H, IbÁÑez-Bernal S, Jaschhof M, Kameneva EP, Kerr PH, Korneyev V, Korytkowski CA, Kung GA, Kvifte GM, Lonsdale O, Marshall SA, Mathis WN, Michelsen V, Naglis S, Norrbom AL, Paiero S, Pape T, Pereira-Colavite A, Pollet M, Rochefort S, Rung A, Runyon JB, Savage J, Silva VC, Sinclair BJ, Skevington JH, Stireman JOI, Swann J, Vilkamaa P, Wheeler T, Whitworth T, Wong M, Wood DM, Woodley N, Yau T, Zavortink TJ, Zumbado MA.

Zootaxa. 2018 Mar 27;4402(1):53-90. doi: 10.11646/zootaxa.4402.1.3.

PMID:
29690278
7.

The performance of a new local false discovery rate method on tests of association between coronary artery disease (CAD) and genome-wide genetic variants.

Mei S, Karimnezhad A, Forest M, Bickel DR, Greenwood CMT.

PLoS One. 2017 Sep 20;12(9):e0185174. doi: 10.1371/journal.pone.0185174. eCollection 2017.

8.

The Costa Rican Systenus Loew (Diptera: Dolichopodidae): rich local sympatry in an otherwise rare genus.

Bickel DJ.

Zootaxa. 2015 Sep 21;4020(1):169-82. doi: 10.11646/zootaxa.4020.1.7.

PMID:
26624094
9.

Entrapment bias of arthropods in Miocene amber revealed by trapping experiments in a tropical forest in Chiapas, Mexico.

Solórzano Kraemer MM, Kraemer AS, Stebner F, Bickel DJ, Rust J.

PLoS One. 2015 Mar 18;10(3):e0118820. doi: 10.1371/journal.pone.0118820. eCollection 2015. Erratum in: PLoS One. 2015;10(5):e0126046. Kraemer, Mónica M Solórzano [corrected to Solórzano Kraemer, Mónica M].

10.

Corrigendum to: Simple estimators of false discovery rates given as few as one or two p-values without strong parametric assumptions.

Bickel DR.

Stat Appl Genet Mol Biol. 2015 Apr;14(2):225. doi: 10.1515/sagmb-2014-0100. No abstract available.

PMID:
25781715
11.

Getting comfortable with death. Palliative care begins at home.

Honeycutt PJ, Bickel D.

Mo Med. 2014 May-Jun;111(3):174-9.

12.

Muscle uncoupling protein 3 overexpression mimics endurance training and reduces circulating biomarkers of incomplete β-oxidation.

Aguer C, Fiehn O, Seifert EL, Bézaire V, Meissen JK, Daniels A, Scott K, Renaud JM, Padilla M, Bickel DR, Dysart M, Adams SH, Harper ME.

FASEB J. 2013 Oct;27(10):4213-25. doi: 10.1096/fj.13-234302. Epub 2013 Jun 28. Erratum in: FASEB J. 2014 Jan;28(1):520. FASEB J. 2014 Jan;28(1):520.

13.

Simple estimators of false discovery rates given as few as one or two p-values without strong parametric assumptions.

Bickel DR.

Stat Appl Genet Mol Biol. 2013 Aug;12(4):529-43. doi: 10.1515/sagmb-2013-0003. Erratum in: Stat Appl Genet Mol Biol. 2015 Apr;14(2):225.

PMID:
23798617
14.

Parametric estimation of the local false discovery rate for identifying genetic associations.

Yang Y, Aghababazadeh FA, Bickel DR.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Jan-Feb;10(1):98-108. doi: 10.1109/TCBB.2012.140.

PMID:
23702547
15.
16.

Estimators of the local false discovery rate designed for small numbers of tests.

Padilla M, Bickel DR.

Stat Appl Genet Mol Biol. 2012 Oct 12;11(5):4. doi: 10.1515/1544-6115.1807.

PMID:
23079518
17.

Empirical Bayes interval estimates that are conditionally equal to unadjusted confidence intervals or to default prior credibility intervals.

Bickel DR.

Stat Appl Genet Mol Biol. 2012 Feb 21;11(3):Article 7. doi: 10.1515/1544-6115.1765.

PMID:
22499708
18.

Estimating the null distribution to adjust observed confidence levels for genome-scale screening.

Bickel DR.

Biometrics. 2011 Jun;67(2):363-70. doi: 10.1111/j.1541-0420.2010.01491.x. Epub 2010 Sep 28.

PMID:
20880014
19.

Shrinkage estimation of effect sizes as an alternative to hypothesis testing followed by estimation in high-dimensional biology: applications to differential gene expression.

Montazeri Z, Yanofsky CM, Bickel DR.

Stat Appl Genet Mol Biol. 2010;9:Article23. doi: 10.2202/1544-6115.1504. Epub 2010 Jun 8.

PMID:
20597849
20.

Long-chain fatty acid combustion rate is associated with unique metabolite profiles in skeletal muscle mitochondria.

Seifert EL, Fiehn O, Bezaire V, Bickel DR, Wohlgemuth G, Adams SH, Harper ME.

PLoS One. 2010 Mar 24;5(3):e9834. doi: 10.1371/journal.pone.0009834.

21.

Validation of differential gene expression algorithms: application comparing fold-change estimation to hypothesis testing.

Yanofsky CM, Bickel DR.

BMC Bioinformatics. 2010 Jan 28;11:63. doi: 10.1186/1471-2105-11-63.

22.

Selective activation of the M1 muscarinic acetylcholine receptor achieved by allosteric potentiation.

Ma L, Seager MA, Wittmann M, Jacobson M, Bickel D, Burno M, Jones K, Graufelds VK, Xu G, Pearson M, McCampbell A, Gaspar R, Shughrue P, Danziger A, Regan C, Flick R, Pascarella D, Garson S, Doran S, Kreatsoulas C, Veng L, Lindsley CW, Shipe W, Kuduk S, Sur C, Kinney G, Seabrook GR, Ray WJ.

Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15950-5. doi: 10.1073/pnas.0900903106. Epub 2009 Aug 26. Erratum in: Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):18040. Seager, Matthew [corrected to Seager, Matthew A].

23.

Gene network reconstruction from transcriptional dynamics under kinetic model uncertainty: a case for the second derivative.

Bickel DR, Montazeri Z, Hsieh PC, Beatty M, Lawit SJ, Bate NJ.

Bioinformatics. 2009 Mar 15;25(6):772-9. doi: 10.1093/bioinformatics/btp028. Epub 2009 Feb 13.

24.

Correcting the estimated level of differential expression for gene selection bias: application to a microarray study.

Bickel DR.

Stat Appl Genet Mol Biol. 2008;7(1):Article10. doi: 10.2202/1544-6115.1330. Epub 2008 Mar 10.

PMID:
18384263
25.

Genome-wide allele-specific expression analysis using Massively Parallel Signature Sequencing (MPSS) reveals cis- and trans-effects on gene expression in maize hybrid meristem tissue.

Guo M, Yang S, Rupe M, Hu B, Bickel DR, Arthur L, Smith O.

Plant Mol Biol. 2008 Mar;66(5):551-63. doi: 10.1007/s11103-008-9290-z. Epub 2008 Jan 26.

PMID:
18224447
26.

Drosophila Follistatin exhibits unique structural modifications and interacts with several TGF-beta family members.

Bickel D, Shah R, Gesualdi SC, Haerry TE.

Mech Dev. 2008 Jan-Feb;125(1-2):117-29. Epub 2007 Oct 5.

27.
28.

A novel selective positive allosteric modulator of metabotropic glutamate receptor subtype 5 has in vivo activity and antipsychotic-like effects in rat behavioral models.

Kinney GG, O'Brien JA, Lemaire W, Burno M, Bickel DJ, Clements MK, Chen TB, Wisnoski DD, Lindsley CW, Tiller PR, Smith S, Jacobson MA, Sur C, Duggan ME, Pettibone DJ, Conn PJ, Williams DL Jr.

J Pharmacol Exp Ther. 2005 Apr;313(1):199-206. Epub 2004 Dec 17.

PMID:
15608073
29.

Probabilities of spurious connections in gene networks: application to expression time series.

Bickel DR.

Bioinformatics. 2005 Apr 1;21(7):1121-8. Epub 2004 Nov 16.

PMID:
15546939
30.

Comparison of methods of temperature measurement in swine.

Hanneman SK, Jesurum-Urbaitis JT, Bickel DR.

Lab Anim. 2004 Jul;38(3):297-306.

PMID:
15207041
31.
32.

Differential effects of sodium nitroprusside and hydralazine in a rat model of topical FeCl3-induced carotid artery thrombosis.

Robinson MA, Welsh DC, Bickel DJ, Lynch JJ, Lyle EA.

Thromb Res. 2003;111(1-2):59-64.

PMID:
14644081
33.

Nursing home experience with hospice.

Parker-Oliver D, Bickel D.

J Am Med Dir Assoc. 2002 Mar-Apr;3(2):46-50.

PMID:
12807538
34.
35.
36.

3-amino-4-sulfonylpyridinone acetamide and related pyridothiadiazine thrombin inhibitors.

Sanderson PE, Cutrona KJ, Savage KL, Naylor-Olsen AM, Bickel DJ, Bohn DL, Clayton FC, Krueger JA, Lewis SD, Lucas BJ, Lyle EA, Wallace AA, Welsh DC, Yan Y.

Bioorg Med Chem Lett. 2003 Apr 17;13(8):1441-4.

PMID:
12668008
38.

Heart rate variability of preterm neonates quantified by energy entropy.

Verklan MT, Bickel DR, Moon J.

Nurs Health Sci. 1999 Jun;1(2):103-11.

PMID:
10894658
41.
42.

Immunohistochemical demonstration of nerve growth factor receptor in bovine testis.

Wrobel KH, Bickel D, Schimmel M, Kujat R.

Cell Tissue Res. 1996 Aug;285(2):189-97.

PMID:
8766155
44.

Evolution and ultrastructure of the bovine spermatogonia precursor cell line.

Wrobel KH, Bickel D, Kujat R, Schimmel M.

Cell Tissue Res. 1995 Aug;281(2):249-59.

PMID:
7648620
45.

Configuration and distribution of bovine spermatogonia.

Wrobel KH, Bickel D, Kujat R, Schimmel M.

Cell Tissue Res. 1995 Feb;279(2):277-89.

PMID:
7895268
46.
47.

Identification and characterization of inhibitors of peptido-leukotriene-synthesis from Petasites hybridus.

Bickel D, Röder T, Bestmann HJ, Brune K.

Planta Med. 1994 Aug;60(4):318-22.

PMID:
7938265
48.
49.
50.

Effective schools, classrooms, and instruction: implications for special education.

Bickel WE, Bickel DD.

Except Child. 1986 Apr;52(6):489-500. No abstract available.

PMID:
3699084

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