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Items: 28

1.

CRISPR Spacers Indicate Preferential Matching of Specific Virioplankton Genes.

Nasko DJ, Ferrell BD, Moore RM, Bhavsar JD, Polson SW, Wommack KE.

MBio. 2019 Mar 5;10(2). pii: e02651-18. doi: 10.1128/mBio.02651-18.

2.

Light Modulates the Physiology of Nonphototrophic Actinobacteria.

Maresca JA, Keffer JL, Hempel PP, Polson SW, Shevchenko O, Bhavsar J, Powell D, Miller KJ, Singh A, Hahn MW.

J Bacteriol. 2019 Apr 24;201(10). pii: e00740-18. doi: 10.1128/JB.00740-18. Print 2019 May 15.

PMID:
30692175
3.

Adult venous endothelium is a niche for highly proliferative and vasculogenic endothelial colony-forming cells.

Green L, Ofstein RH, Rapp B, Saadatzadeh MR, Bhavsar JR, Fajardo A, Dalsing MC, Ingram DA, Murphy MP.

J Vasc Surg. 2017 Dec;66(6):1854-1863. doi: 10.1016/j.jvs.2016.11.059. Epub 2017 Jun 24.

PMID:
28655551
4.

IM-TORNADO: a tool for comparison of 16S reads from paired-end libraries.

Jeraldo P, Kalari K, Chen X, Bhavsar J, Mangalam A, White B, Nelson H, Kocher JP, Chia N.

PLoS One. 2014 Dec 15;9(12):e114804. doi: 10.1371/journal.pone.0114804. eCollection 2014.

5.

MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing.

Kalari KR, Nair AA, Bhavsar JD, O'Brien DR, Davila JI, Bockol MA, Nie J, Tang X, Baheti S, Doughty JB, Middha S, Sicotte H, Thompson AE, Asmann YW, Kocher JP.

BMC Bioinformatics. 2014 Jun 27;15:224. doi: 10.1186/1471-2105-15-224.

6.

Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma.

Borad MJ, Champion MD, Egan JB, Liang WS, Fonseca R, Bryce AH, McCullough AE, Barrett MT, Hunt K, Patel MD, Young SW, Collins JM, Silva AC, Condjella RM, Block M, McWilliams RR, Lazaridis KN, Klee EW, Bible KC, Harris P, Oliver GR, Bhavsar JD, Nair AA, Middha S, Asmann Y, Kocher JP, Schahl K, Kipp BR, Barr Fritcher EG, Baker A, Aldrich J, Kurdoglu A, Izatt T, Christoforides A, Cherni I, Nasser S, Reiman R, Phillips L, McDonald J, Adkins J, Mastrian SD, Placek P, Watanabe AT, Lobello J, Han H, Von Hoff D, Craig DW, Stewart AK, Carpten JD.

PLoS Genet. 2014 Feb 13;10(2):e1004135. doi: 10.1371/journal.pgen.1004135. eCollection 2014 Feb.

7.

SoftSearch: integration of multiple sequence features to identify breakpoints of structural variations.

Hart SN, Sarangi V, Moore R, Baheti S, Bhavsar JD, Couch FJ, Kocher JP.

PLoS One. 2013 Dec 16;8(12):e83356. doi: 10.1371/journal.pone.0083356. eCollection 2013.

8.

Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum.

Veluchamy A, Lin X, Maumus F, Rivarola M, Bhavsar J, Creasy T, O'Brien K, Sengamalay NA, Tallon LJ, Smith AD, Rayko E, Ahmed I, Le Crom S, Farrant GK, Sgro JY, Olson SA, Bondurant SS, Allen AE, Rabinowicz PD, Sussman MR, Bowler C, Tirichine L.

Nat Commun. 2013;4:2091. doi: 10.1038/ncomms3091. Erratum in: Nat Commun. 2014;5:3028. Allen, Andrew [corrected to Allen, Andrew E].

PMID:
23820484
9.

Direct assessment of viral diversity in soils by random PCR amplification of polymorphic DNA.

Srinivasiah S, Lovett J, Polson S, Bhavsar J, Ghosh D, Roy K, Fuhrmann JJ, Radosevich M, Wommack KE.

Appl Environ Microbiol. 2013 Sep;79(18):5450-7. doi: 10.1128/AEM.00268-13. Epub 2013 Jun 21.

10.

VIROME: a standard operating procedure for analysis of viral metagenome sequences.

Wommack KE, Bhavsar J, Polson SW, Chen J, Dumas M, Srinivasiah S, Furman M, Jamindar S, Nasko DJ.

Stand Genomic Sci. 2012 Jul 30;6(3):427-39. doi: 10.4056/sigs.2945050. Epub 2012 Jul 27.

11.

Resident Endothelial Progenitor Cells From Human Placenta Have Greater Vasculogenic Potential Than Circulating Endothelial Progenitor Cells From Umbilical Cord Blood.

Rapp BM, Saadatzedeh MR, Ofstein RH, Bhavsar JR, Tempel ZS, Moreno O, Morone P, Booth DA, Traktuev DO, Dalsing MC, Ingram DA, Yoder MC, March KL, Murphy MP.

Cell Med. 2011 Dec 9;2(3):85-96. doi: 10.3727/215517911X617888. eCollection 2012.

12.

Listeria myocarditis with an atypical intracavitary vegetation/thrombus.

Bhavsar J, Gordon D, Shea M.

Heart. 2010 Oct;96(20):1637. doi: 10.1136/hrt.2010.203679. No abstract available.

PMID:
20937752
13.

Adenosine transport, erythrocyte deformability and microvascular dysfunction: an unrecognized potential role for dipyridamole therapy.

Bhavsar J, Rosenson RS.

Clin Hemorheol Microcirc. 2010;44(3):193-205. doi: 10.3233/CH-2010-1274. Review.

PMID:
20364065
14.

Census of the viral metagenome within an activated sludge microbial assemblage.

Parsley LC, Consuegra EJ, Thomas SJ, Bhavsar J, Land AM, Bhuiyan NN, Mazher MA, Waters RJ, Wommack KE, Harper WF Jr, Liles MR.

Appl Environ Microbiol. 2010 Apr;76(8):2673-7. doi: 10.1128/AEM.02520-09. Epub 2010 Feb 12.

15.
16.

PTEN and p53 are required for hypoxia induced expression of maspin in glioblastoma cells.

Eitel JA, Bijangi-Vishehsaraei K, Saadatzadeh MR, Bhavsar JR, Murphy MP, Pollok KE, Mayo LD.

Cell Cycle. 2009 Mar 15;8(6):896-901. Epub 2009 Mar 21.

PMID:
19221500
17.

Isolation independent methods of characterizing phage communities 2: characterizing a metagenome.

Wommack KE, Bench SR, Bhavsar J, Mead D, Hanson T.

Methods Mol Biol. 2009;502:279-89. doi: 10.1007/978-1-60327-565-1_16.

PMID:
19082562
18.

Phages across the biosphere: contrasts of viruses in soil and aquatic environments.

Srinivasiah S, Bhavsar J, Thapar K, Liles M, Schoenfeld T, Wommack KE.

Res Microbiol. 2008 Jun;159(5):349-57. doi: 10.1016/j.resmic.2008.04.010. Epub 2008 May 8. Review.

PMID:
18565737
19.

Metagenomics: read length matters.

Wommack KE, Bhavsar J, Ravel J.

Appl Environ Microbiol. 2008 Mar;74(5):1453-63. doi: 10.1128/AEM.02181-07. Epub 2008 Jan 11.

20.

Impact of duty hours restrictions on quality of care and clinical outcomes.

Bhavsar J, Montgomery D, Li J, Kline-Rogers E, Saab F, Motivala A, Froehlich JB, Parekh V, Del Valle J, Eagle KA.

Am J Med. 2007 Nov;120(11):968-74.

PMID:
17976424
21.

Human CD34+AC133+VEGFR-2+ cells are not endothelial progenitor cells but distinct, primitive hematopoietic progenitors.

Case J, Mead LE, Bessler WK, Prater D, White HA, Saadatzadeh MR, Bhavsar JR, Yoder MC, Haneline LS, Ingram DA.

Exp Hematol. 2007 Jul;35(7):1109-18.

PMID:
17588480
22.

Clonogenic endothelial progenitor cells are sensitive to oxidative stress.

Ingram DA, Krier TR, Mead LE, McGuire C, Prater DN, Bhavsar J, Saadatzadeh MR, Bijangi-Vishehsaraei K, Li F, Yoder MC, Haneline LS.

Stem Cells. 2007 Feb;25(2):297-304. Epub 2006 Oct 5.

23.

An overview of stress echocardiography in the study of patients with dilated or hypertrophic cardiomyopathy.

Wu WC, Bhavsar JH, Aziz GF, Sadaniantz A.

Echocardiography. 2004 Jul;21(5):467-75. Review.

PMID:
15209731
24.

Combined effect of carbon-dioxide laser and neutral 2% NaF on acid resistance of human tooth enamel.

Kakade A, Damle SG, Bhavsar JP, Chatterjee V, Deb P.

J Indian Soc Pedod Prev Dent. 1996 Mar;14(1):26-30.

PMID:
9522752
25.

Dental caries and oral hygiene amongst 12-14 years old handicapped children of Bombay, India.

Bhavsar JP, Damle SG.

J Indian Soc Pedod Prev Dent. 1995 Aug;13(1):1-3.

PMID:
9522730
26.

Plaque removing efficacy of individually modified toothbrushes in cerebral palsy children.

Damle SG, Bhavsar JP.

ASDC J Dent Child. 1995 Jul-Aug;62(4):279-82. No abstract available.

PMID:
7593888
27.

A method to increase efficiency and minimize anomalous electrophoretic transfer in protein blotting.

Bhavsar JH, Remmler J, Lobel P.

Anal Biochem. 1994 Sep;221(2):234-42.

PMID:
7810862
28.

Idiopathic gingival fibromatosis associated with mild hypertrichosis.

Bhavsar JP, Damle SG, Bhatt AP.

J Indian Soc Pedod Prev Dent. 1991 Mar;9(1):31-3.

PMID:
1820429

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