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Items: 1 to 50 of 76

1.

Comparison of Methods for Differential Co-expression Analysis for Disease Biomarker Prediction.

Kakati T, Bhattacharyya DK, Barah P, Kalita JK.

Comput Biol Med. 2019 Oct;113:103380. doi: 10.1016/j.compbiomed.2019.103380. Epub 2019 Aug 10. Review.

PMID:
31415946
2.

Effect of pretreatment with organic solvent on enzymatic digestibility of cauliflower wastes.

Majumdar S, Goswami B, Chakraborty A, Bhattacharyya DK, Bhowal J.

Prep Biochem Biotechnol. 2019;49(10):935-948. doi: 10.1080/10826068.2019.1650374. Epub 2019 Aug 13.

PMID:
31407947
3.

Emulsions stabilized by soy protein nanoparticles as potential functional non-dairy yogurts.

Sengupta S, Bhattacharyya DK, Goswami R, Bhowal J.

J Sci Food Agric. 2019 Oct;99(13):5808-5818. doi: 10.1002/jsfa.9851. Epub 2019 Jul 11.

PMID:
31177542
4.

PNME - A gene-gene parallel network module extraction method.

Jaiswal B, Utkarsh K, Bhattacharyya DK.

J Genet Eng Biotechnol. 2018 Dec;16(2):447-457. doi: 10.1016/j.jgeb.2018.08.003. Epub 2018 Dec 11.

5.

(Differential) Co-Expression Analysis of Gene Expression: A Survey of Best Practices.

Chowdhury HA, Bhattacharyya DK, Kalita JK.

IEEE/ACM Trans Comput Biol Bioinform. 2019 Jan 16. doi: 10.1109/TCBB.2019.2893170. [Epub ahead of print]

PMID:
30668502
6.

A common neighbor based technique to detect protein complexes in PPI networks.

Haque M, Sarmah R, Bhattacharyya DK.

J Genet Eng Biotechnol. 2018 Jun;16(1):227-238. doi: 10.1016/j.jgeb.2017.10.010. Epub 2017 Oct 18.

7.

Detecting protein complexes based on a combination of topological and biological properties in protein-protein interaction network.

Sharma P, Bhattacharyya DK, Kalita JK.

J Genet Eng Biotechnol. 2018 Jun;16(1):217-226. doi: 10.1016/j.jgeb.2017.11.005. Epub 2017 Nov 26.

8.

Differential Expression Analysis of RNA-seq Reads: Overview, Taxonomy and Tools.

Chowdhury HA, Bhattacharyya DK, Kalita JK.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Oct 1. doi: 10.1109/TCBB.2018.2873010. [Epub ahead of print]

PMID:
30281477
9.

Biomarker Identification for Cancer Disease Using Biclustering Approach: An Empirical Study.

Mandal K, Sarmah R, Bhattacharyya DK.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Mar 29. doi: 10.1109/TCBB.2018.2820695. [Epub ahead of print]

PMID:
29993834
10.

THD-Tricluster: A robust triclustering technique and its application in condition specific change analysis in HIV-1 progression data.

Kakati T, Ahmed HA, Bhattacharyya DK, Kalita JK.

Comput Biol Chem. 2018 Aug;75:154-167. doi: 10.1016/j.compbiolchem.2018.05.007. Epub 2018 May 7.

PMID:
29787933
11.

Protein complex finding and ranking: An application to Alzheimer's disease.

Sharma P, Bhattacharyya DK, Kalita JK.

J Biosci. 2017 Sep;42(3):383-396.

12.

Disease biomarker identification from gene network modules for metastasized breast cancer.

Sharma P, Bhattacharyya DK, Kalita J.

Sci Rep. 2017 Apr 21;7(1):1072. doi: 10.1038/s41598-017-00996-x.

13.

Nutritional Evaluation of Oleogel Made from Micronutrient Rich Edible Oils.

Ghosh M, Begg F, Bhattacharyya DK, Bandyopadhya N, Ghosh M.

J Oleo Sci. 2017;66(3):217-226. doi: 10.5650/jos.ess16165.

14.

THD-Module Extractor: An Application for CEN Module Extraction and Interesting Gene Identification for Alzheimer's Disease.

Kakati T, Kashyap H, Bhattacharyya DK.

Sci Rep. 2016 Nov 30;6:38046. doi: 10.1038/srep38046.

15.

Preparation of human milk fat analogue by enzymatic interesterification reaction using palm stearin and fish oil.

Ghosh M, Sengupta A, Bhattacharyya DK, Ghosh M.

J Food Sci Technol. 2016 Apr;53(4):2017-24. doi: 10.1007/s13197-016-2180-5. Epub 2016 Apr 19.

16.

MIPCE: an MI-based protein complex extraction technique.

Mahanta P, Bhattacharyya DK, Ghosh A.

J Biosci. 2015 Oct;40(4):701-8.

17.

Core and peripheral connectivity based cluster analysis over PPI network.

Ahmed HA, Bhattacharyya DK, Kalita JK.

Comput Biol Chem. 2015 Dec;59 Pt B:32-41. doi: 10.1016/j.compbiolchem.2015.08.008. Epub 2015 Aug 24.

PMID:
26362299
18.

Shifting-and-Scaling Correlation Based Biclustering Algorithm.

Ahmed HA, Mahanta P, Bhattacharyya DK, Kalita JK.

IEEE/ACM Trans Comput Biol Bioinform. 2014 Nov-Dec;11(6):1239-52. doi: 10.1109/TCBB.2014.2323054.

PMID:
26357059
19.

Analysis of Gene Expression Patterns Using Biclustering.

Roy S, Bhattacharyya DK, Kalita JK.

Methods Mol Biol. 2016;1375:91-103. doi: 10.1007/7651_2015_280.

PMID:
26350227
20.

In vitro antioxidant assay of medium chain fatty acid rich rice bran oil in comparison to native rice bran oil.

Sengupta A, Ghosh M, Bhattacharyya DK.

J Food Sci Technol. 2015 Aug;52(8):5188-95. doi: 10.1007/s13197-014-1543-z. Epub 2014 Sep 23.

21.

TDAC: co-expressed gene pattern finding using attribute clustering.

Rahman TA, Bhattacharyya DK.

Int J Bioinform Res Appl. 2015;11(1):45-71. doi: 10.1504/IJBRA.2015.067339.

PMID:
25667385
22.
23.

Reconstruction of gene co-expression network from microarray data using local expression patterns.

Roy S, Bhattacharyya DK, Kalita JK.

BMC Bioinformatics. 2014;15 Suppl 7:S10. doi: 10.1186/1471-2105-15-S7-S10. Epub 2014 May 28.

24.

FUMET: a fuzzy network module extraction technique for gene expression data.

Mahanta P, Ahmed HA, Bhattacharyya DK, Ghosh A.

J Biosci. 2014 Jun;39(3):351-64.

25.

Optimization of reaction parameters of acidolysis reaction between mustard oil and capric acid by using Thermomyces lanuginosus lipase.

Silroy S, Sengupta A, Bhattacharyya DK, Ghosh M.

J Food Sci Technol. 2014 Apr;51(4):715-21. doi: 10.1007/s13197-011-0543-5. Epub 2011 Oct 11.

26.

An effective method for network module extraction from microarray data.

Mahanta P, Ahmed HA, Bhattacharyya DK, Kalita JK.

BMC Bioinformatics. 2012;13 Suppl 13:S4. doi: 10.1186/1471-2105-13-S13-S4. Epub 2012 Aug 24.

27.

An effective graph-based clustering technique to identify coherent patterns from gene expression data.

Priyadarshini G, Sarmah R, Chakraborty B, Bhattacharyya DK, Kalita JK.

Int J Bioinform Res Appl. 2012;8(1-2):18-37. doi: 10.1504/IJBRA.2012.045974.

PMID:
22450268
28.
29.

Dietary effect of capric acid containing soyphospholipids.

Dasgupta S, Bhattacharyya DK.

J Oleo Sci. 2009;58(8):395-401.

30.

A new approach for clustering gene expression time series data.

Das R, Kalita J, Bhattacharyya DK.

Int J Bioinform Res Appl. 2009;5(3):310-28.

PMID:
19525203
31.
32.

Dietary effect of eicosapentaenoic acid (EPA) containing soyphospholipid.

Dasgupta S, Bhattacharyya DK.

J Oleo Sci. 2007;56(11):563-8.

34.

Occurrence of sopE gene and its phenotypic expression among different serovars of Salmonella enterica isolated from man and animals.

Rahman H, Hardt WD, Murugkar HV, Bhattacharyya DK.

Indian J Exp Biol. 2005 Jul;43(7):631-4.

PMID:
16053270
35.

Biotransformation of limonene by Pseudomonas putida.

Chatterjee T, Bhattacharyya DK.

Appl Microbiol Biotechnol. 2001 May;55(5):541-6.

PMID:
11414318
36.

Study of lipase-catalyzed hydrolysis of some monoterpene esters.

Chatterjee T, Chatterjee BK, Bhattacharyya DK.

Can J Microbiol. 2001 May;47(5):397-403.

PMID:
11400729
37.

Nutritional quality of sesame seed protein fraction extracted with isopropanol.

Sen M, Bhattacharyya DK.

J Agric Food Chem. 2001 May;49(5):2641-6.

PMID:
11368648
38.

Nutritional quality of sunflower seed protein fraction extracted with isopropanol.

Sen M, Bhattacharyya DK.

Plant Foods Hum Nutr. 2000;55(3):265-78.

PMID:
11030480
39.

Conformationally constrained analogues of diacylglycerol (DAG). 16. How much structural complexity is necessary for recognition and high binding affinity to protein kinase C?

Nacro K, Bienfait B, Lee J, Han KC, Kang JH, Benzaria S, Lewin NE, Bhattacharyya DK, Blumberg PM, Marquez VE.

J Med Chem. 2000 Mar 9;43(5):921-44.

PMID:
10715158
40.

Protein kinase C ligands based on tetrahydrofuran templates containing a new set of phorbol ester pharmacophores.

Lee J, Kang JH, Lee SY, Han KC, Torres CM, Bhattacharyya DK, Blumberg PM, Marquez VE.

J Med Chem. 1999 Oct 7;42(20):4129-39.

PMID:
10514283
42.

Nutritional characteristics of oil containing conjugated octadecatrienoic fatty acid.

Dhar P, Bhattacharyya DK.

Ann Nutr Metab. 1998;42(5):290-6.

PMID:
9812020
43.

Issues in the disposal of waste containing naturally occurring radioactive material.

Bhattacharyya DK.

Appl Radiat Isot. 1998 Mar;49(3):215-26.

PMID:
9451776
45.

Activation of parietal cell by mercaptomethylimidazole: a novel inducer of gastric acid secretion.

Bandyopadhyay U, Chatterjee R, Chakraborty TK, Ganguly CK, Bhattacharyya DK, Banerjee RK.

Biochem Pharmacol. 1997 Jul 15;54(2):241-8.

PMID:
9271328
46.
48.

EDTA inhibits lactoperoxidase-catalyzed iodide oxidation by acting as an electron-donor and interacting near the iodide binding site.

Bhattacharyya DK, Bandyopadhyay U, Banerjee RK.

Mol Cell Biochem. 1996 Sep 20;162(2):105-11.

PMID:
8905632

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