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Items: 47

1.

Atomic Scale Interface Manipulation, Structural Engineering, and Their Impact on Ultrathin Carbon Films in Controlling Wear, Friction, and Corrosion.

Dwivedi N, Yeo RJ, Yak LJ, Satyanarayana N, Dhand C, Bhat TN, Zhang Z, Tripathy S, Bhatia CS.

ACS Appl Mater Interfaces. 2016 Jul 13;8(27):17606-21. doi: 10.1021/acsami.6b03325. Epub 2016 Jun 27.

PMID:
27267790
2.

Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop.

Adams PD, Aertgeerts K, Bauer C, Bell JA, Berman HM, Bhat TN, Blaney JM, Bolton E, Bricogne G, Brown D, Burley SK, Case DA, Clark KL, Darden T, Emsley P, Feher VA, Feng Z, Groom CR, Harris SF, Hendle J, Holder T, Joachimiak A, Kleywegt GJ, Krojer T, Marcotrigiano J, Mark AE, Markley JL, Miller M, Minor W, Montelione GT, Murshudov G, Nakagawa A, Nakamura H, Nicholls A, Nicklaus M, Nolte RT, Padyana AK, Peishoff CE, Pieniazek S, Read RJ, Shao C, Sheriff S, Smart O, Soisson S, Spurlino J, Stouch T, Svobodova R, Tempel W, Terwilliger TC, Tronrud D, Velankar S, Ward SC, Warren GL, Westbrook JD, Williams P, Yang H, Young J.

Structure. 2016 Apr 5;24(4):502-508. doi: 10.1016/j.str.2016.02.017.

3.

Observation of Room Temperature Ferromagnetism in InN Nanostructures.

Roul B, Kumar M, Bhat TN, Rajpalke MK, Krupanidhi SB, Kumar N, Sundaresan A.

J Nanosci Nanotechnol. 2015 Jun;15(6):4426-30.

PMID:
26369060
4.

Spectroscopic studies of In2O3 nanostructures; photovoltaic demonstration of In2O3/p-Si heterojunction.

Bhat TN, Roul B, Rajpalke MK, Kumar M, Krupanidhi SB.

J Nanosci Nanotechnol. 2013 Jan;13(1):498-503.

PMID:
23646761
5.

New concepts for building vocabulary for cell image ontologies.

Plant AL, Elliott JT, Bhat TN.

BMC Bioinformatics. 2011 Dec 21;12:487. doi: 10.1186/1471-2105-12-487.

6.

Transport and infrared photoresponse properties of InN nanorods/Si heterojunction.

Kumar M, Bhat TN, Rajpalke MK, Roul B, Kalghatgi AT, Krupanidhi SB.

Nanoscale Res Lett. 2011 Nov 28;6(1):609. doi: 10.1186/1556-276X-6-609.

7.

Chemical compound navigator: a web-based chem-BLAST, chemical taxonomy-based search engine for browsing compounds.

Prasanna MD, Vondrasek J, Wlodawer A, Rodriguez H, Bhat TN.

Proteins. 2006 Jun 1;63(4):907-17.

PMID:
16508960
8.

Application of InChI to curate, index, and query 3-D structures.

Prasanna MD, Vondrasek J, Wlodawer A, Bhat TN.

Proteins. 2005 Jul 1;60(1):1-4.

PMID:
15861385
9.

A framework for scientific data modeling and automated software development.

Fogh RH, Boucher W, Vranken WF, Pajon A, Stevens TJ, Bhat TN, Westbrook J, Ionides JM, Laue ED.

Bioinformatics. 2005 Apr 15;21(8):1678-84. Epub 2004 Dec 21.

PMID:
15613391
10.

Thermodynamics of enzyme-catalyzed reactions--a database for quantitative biochemistry.

Goldberg RN, Tewari YB, Bhat TN.

Bioinformatics. 2004 Nov 1;20(16):2874-7. Epub 2004 May 14.

PMID:
15145806
11.

The Protein Data Bank.

Berman HM, Battistuz T, Bhat TN, Bluhm WF, Bourne PE, Burkhardt K, Feng Z, Gilliland GL, Iype L, Jain S, Fagan P, Marvin J, Padilla D, Ravichandran V, Schneider B, Thanki N, Weissig H, Westbrook JD, Zardecki C.

Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 No 1):899-907. Epub 2002 May 29.

PMID:
12037327
12.

The CCPN project: an interim report on a data model for the NMR community.

Fogh R, Ionides J, Ulrich E, Boucher W, Vranken W, Linge JP, Habeck M, Rieping W, Bhat TN, Westbrook J, Henrick K, Gilliland G, Berman H, Thornton J, Nilges M, Markley J, Laue E.

Nat Struct Biol. 2002 Jun;9(6):416-8.

PMID:
12032555
13.

The Protein Data Bank: unifying the archive.

Westbrook J, Feng Z, Jain S, Bhat TN, Thanki N, Ravichandran V, Gilliland GL, Bluhm W, Weissig H, Greer DS, Bourne PE, Berman HM.

Nucleic Acids Res. 2002 Jan 1;30(1):245-8.

14.

The Protein Data Bank and the challenge of structural genomics.

Berman HM, Bhat TN, Bourne PE, Feng Z, Gilliland G, Weissig H, Westbrook J.

Nat Struct Biol. 2000 Nov;7 Suppl:957-9.

PMID:
11103999
15.

The PDB data uniformity project.

Bhat TN, Bourne P, Feng Z, Gilliland G, Jain S, Ravichandran V, Schneider B, Schneider K, Thanki N, Weissig H, Westbrook J, Berman HM.

Nucleic Acids Res. 2001 Jan 1;29(1):214-8.

16.

The Protein Data Bank.

Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE.

Nucleic Acids Res. 2000 Jan 1;28(1):235-42.

17.

Unsymmetric nonpeptidic HIV protease inhibitors containing anthranilamide as a P2' ligand.

Randad RS, Lubkowska L, Eissenstat MA, Gulnik SV, Yu B, Bhat TN, Clanton DJ, House T, Stinson SF, Erickson JW.

Bioorg Med Chem Lett. 1998 Dec 15;8(24):3537-42.

PMID:
9934467
18.

Functional characterization of the protease of human endogenous retrovirus, K10: can it complement HIV-1 protease?

Towler EM, Gulnik SV, Bhat TN, Xie D, Gustschina E, Sumpter TR, Robertson N, Jones C, Sauter M, Mueller-Lantzsch N, Debouck C, Erickson JW.

Biochemistry. 1998 Dec 8;37(49):17137-44.

PMID:
9860826
19.

Cyclopropane-derived peptidomimetics. Design, synthesis, evaluation, and structure of novel HIV-1 protease inhibitors.

Martin SF, Dorsey GO, Gane T, Hillier MC, Kessler H, Baur M, Mathä B, Erickson JW, Bhat TN, Munshi S, Gulnik SV, Topol IA.

J Med Chem. 1998 May 7;41(10):1581-97.

PMID:
9572884
20.

Thermodynamics and proton uptake for pepstatin binding to retroviral and eukaryotic aspartic proteases.

Xie D, Gulnik S, Collins L, Gustchina E, Bhat TN, Erickson JW.

Adv Exp Med Biol. 1998;436:381-6. No abstract available.

PMID:
9561245
21.

4-hydroxy-5,6-dihydropyrones. 2. Potent non-peptide inhibitors of HIV protease.

Tait BD, Hagen S, Domagala J, Ellsworth EL, Gajda C, Hamilton HW, Prasad JV, Ferguson D, Graham N, Hupe D, Nouhan C, Tummino PJ, Humblet C, Lunney EA, Pavlovsky A, Rubin J, Gracheck SJ, Baldwin ET, Bhat TN, Erickson JW, Gulnik SV, Liu B.

J Med Chem. 1997 Nov 7;40(23):3781-92.

PMID:
9371244
22.

Structure and inhibition of plasmepsin II, a hemoglobin-degrading enzyme from Plasmodium falciparum.

Silva AM, Lee AY, Gulnik SV, Maier P, Collins J, Bhat TN, Collins PJ, Cachau RE, Luker KE, Gluzman IY, Francis SE, Oksman A, Goldberg DE, Erickson JW.

Proc Natl Acad Sci U S A. 1996 Sep 17;93(19):10034-9.

23.

Structure of HIV-1 protease with KNI-272, a tight-binding transition-state analog containing allophenylnorstatine.

Baldwin ET, Bhat TN, Gulnik S, Liu B, Topol IA, Kiso Y, Mimoto T, Mitsuya H, Erickson JW.

Structure. 1995 Jun 15;3(6):581-90.

24.

Structural basis of drug resistance for the V82A mutant of HIV-1 proteinase.

Baldwin ET, Bhat TN, Liu B, Pattabiraman N, Erickson JW.

Nat Struct Biol. 1995 Mar;2(3):244-9.

PMID:
7773792
25.

Selection and analysis of human immunodeficiency virus type 1 variants with increased resistance to ABT-538, a novel protease inhibitor.

Markowitz M, Mo H, Kempf DJ, Norbeck DW, Bhat TN, Erickson JW, Ho DD.

J Virol. 1995 Feb;69(2):701-6.

26.

Structure of HIV-1 protease with KNI-272: a transition state mimetic inhibitor containing allophenylnorstatine.

Baldwin ET, Bhat TN, Gulnik S, Liu B, Kiso Y, Mitsuya H, Erickson JW.

Adv Exp Med Biol. 1995;362:445-9. No abstract available.

PMID:
8540355
27.

X-ray structure of a tethered dimer for HIV-1 protease.

Bhat TN, Baldwin ET, Liu B, Cheng YS, Erickson JW.

Adv Exp Med Biol. 1995;362:439-44. No abstract available.

PMID:
8540354
28.

Structure of human cathepsin D: comparison of inhibitor binding and subdomain displacement with other aspartic proteases.

Erickson JW, Baldwin ET, Bhat TN, Gulnik S.

Adv Exp Med Biol. 1995;362:181-92. No abstract available.

PMID:
8540317
29.

Three-dimensional structures of the free and the antigen-complexed Fab from monoclonal anti-lysozyme antibody D44.1.

Braden BC, Souchon H, Eiselé JL, Bentley GA, Bhat TN, Navaza J, Poljak RJ.

J Mol Biol. 1994 Nov 4;243(4):767-81.

PMID:
7966295
30.

Crystal structure of a tethered dimer of HIV-1 proteinase complexed with an inhibitor.

Bhat TN, Baldwin ET, Liu B, Cheng YS, Erickson JW.

Nat Struct Biol. 1994 Aug;1(8):552-6.

PMID:
7664084
31.

Solvent rearrangement in an antigen-antibody interface introduced by site-directed mutagenesis of the antibody combining site.

Ysern X, Fields BA, Bhat TN, Goldbaum FA, Dall'Acqua W, Schwarz FP, Poljak RJ, Mariuzza RA.

J Mol Biol. 1994 May 13;238(4):496-500.

PMID:
8176740
32.

Bound water molecules and conformational stabilization help mediate an antigen-antibody association.

Bhat TN, Bentley GA, Boulot G, Greene MI, Tello D, Dall'Acqua W, Souchon H, Schwarz FP, Mariuzza RA, Poljak RJ.

Proc Natl Acad Sci U S A. 1994 Feb 1;91(3):1089-93.

33.

Three-dimensional structure of a heteroclitic antigen-antibody cross-reaction complex.

Chitarra V, Alzari PM, Bentley GA, Bhat TN, Eiselé JL, Houdusse A, Lescar J, Souchon H, Poljak RJ.

Proc Natl Acad Sci U S A. 1993 Aug 15;90(16):7711-5.

34.

Crystal structures of native and inhibited forms of human cathepsin D: implications for lysosomal targeting and drug design.

Baldwin ET, Bhat TN, Gulnik S, Hosur MV, Sowder RC 2nd, Cachau RE, Collins J, Silva AM, Erickson JW.

Proc Natl Acad Sci U S A. 1993 Jul 15;90(14):6796-800.

35.

Crystallographic refinement of the three-dimensional structure of the FabD1.3-lysozyme complex at 2.5-A resolution.

Fischmann TO, Bentley GA, Bhat TN, Boulot G, Mariuzza RA, Phillips SE, Tello D, Poljak RJ.

J Biol Chem. 1991 Jul 15;266(20):12915-20.

36.

Small rearrangements in structures of Fv and Fab fragments of antibody D1.3 on antigen binding.

Bhat TN, Bentley GA, Fischmann TO, Boulot G, Poljak RJ.

Nature. 1990 Oct 4;347(6292):483-5.

PMID:
2215663
37.
38.

Structure of 5-hydroxy-5-phenyl-7-azatricyclo[7.4.0.02,7]trideca-2,9(1), 10,12-tetraen-8-one by the consistent electron density approach.

Bhat TN, Ammon HL, Mazzocchi PH, Oda M.

Acta Crystallogr C. 1990 Jan 15;46 ( Pt 1):116-9.

PMID:
2331337
39.
40.
41.

Immunochemical and crystallographic studies of antibody D1.3 in its free, antigen-liganded, and idiotope-bound states.

Bentley GA, Bhat TN, Boulot G, Fischmann T, Navaza J, Poljak RJ, Riottot MM, Tello D.

Cold Spring Harb Symp Quant Biol. 1989;54 Pt 1:239-45. No abstract available.

PMID:
2639755
42.
43.

Improving crystallographic macromolecular images: the real-space approach.

Podjarny AD, Bhat TN, Zwick M.

Annu Rev Biophys Biophys Chem. 1987;16:351-73. Review. No abstract available.

PMID:
3297088
44.

The galactan-binding immunoglobulin Fab J539: an X-ray diffraction study at 2.6-A resolution.

Suh SW, Bhat TN, Navia MA, Cohen GH, Rao DN, Rudikoff S, Davies DR.

Proteins. 1986 Sep;1(1):74-80.

PMID:
3449853
45.

Structural homology in the amino-terminal domains of two aminoacyl-tRNA synthetases.

Blow DM, Bhat TN, Metcalfe A, Risler JL, Brunie S, Zelwer C.

J Mol Biol. 1983 Dec 25;171(4):571-6.

PMID:
6363712
46.

Tyrosyl-tRNA synthetase forms a mononucleotide-binding fold.

Bhat TN, Blow DM, Brick P, Nyborg J.

J Mol Biol. 1982 Jul 15;158(4):699-709. No abstract available.

PMID:
7120416
47.

An analysis of side-chain conformation in proteins.

Bhat TN, Sasisekharan V, Vijayan M.

Int J Pept Protein Res. 1979 Feb;13(2):170-84.

PMID:
429093

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