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Items: 1 to 50 of 64

1.

Long-range mobile signals mediate seasonal control of shoot growth.

Miskolczi P, Singh RK, Tylewicz S, Azeez A, Maurya JP, Tarkowská D, Novák O, Jonsson K, Bhalerao RP.

Proc Natl Acad Sci U S A. 2019 May 28;116(22):10852-10857. doi: 10.1073/pnas.1902199116. Epub 2019 May 13.

2.

Abscisic acid signalling mediates biomass trade-off and allocation in poplar.

Yu D, Wildhagen H, Tylewicz S, Miskolczi PC, Bhalerao RP, Polle A.

New Phytol. 2019 Aug;223(3):1192-1203. doi: 10.1111/nph.15878. Epub 2019 Jun 3.

PMID:
31050802
3.

The Dynamics of Cambial Stem Cell Activity.

Fischer U, Kucukoglu M, Helariutta Y, Bhalerao RP.

Annu Rev Plant Biol. 2019 Apr 29;70:293-319. doi: 10.1146/annurev-arplant-050718-100402. Epub 2019 Mar 1.

PMID:
30822110
4.

Rho-of-plant activated root hair formation requires Arabidopsis YIP4a/b gene function.

Gendre D, Baral A, Dang X, Esnay N, Boutté Y, Stanislas T, Vain T, Claverol S, Gustavsson A, Lin D, Grebe M, Bhalerao RP.

Development. 2019 Mar 11;146(5). pii: dev168559. doi: 10.1242/dev.168559.

5.

Environmentally Sensitive Molecular Switches Drive Poplar Phenology.

Maurya JP, Triozzi PM, Bhalerao RP, Perales M.

Front Plant Sci. 2018 Dec 17;9:1873. doi: 10.3389/fpls.2018.01873. eCollection 2018. Review.

6.

A Tree Ortholog of SHORT VEGETATIVE PHASE Floral Repressor Mediates Photoperiodic Control of Bud Dormancy.

Singh RK, Miskolczi P, Maurya JP, Bhalerao RP.

Curr Biol. 2019 Jan 7;29(1):128-133.e2. doi: 10.1016/j.cub.2018.11.006. Epub 2018 Dec 13.

PMID:
30554900
7.

An Evolutionarily Conserved Abscisic Acid Signaling Pathway Regulates Dormancy in the Liverwort Marchantia polymorpha.

Eklund DM, Kanei M, Flores-Sandoval E, Ishizaki K, Nishihama R, Kohchi T, Lagercrantz U, Bhalerao RP, Sakata Y, Bowman JL.

Curr Biol. 2018 Nov 19;28(22):3691-3699.e3. doi: 10.1016/j.cub.2018.10.018. Epub 2018 Nov 8.

PMID:
30416060
8.

Independent yet overlapping pathways ensure the robustness and responsiveness of trans-Golgi network functions in Arabidopsis.

Ravikumar R, Kalbfuß N, Gendre D, Steiner A, Altmann M, Altmann S, Rybak K, Edelmann H, Stephan F, Lampe M, Facher E, Wanner G, Falter-Braun P, Bhalerao RP, Assaad FF.

Development. 2018 Nov 7;145(21). pii: dev169201. doi: 10.1242/dev.169201.

9.

A genetic network mediating the control of bud break in hybrid aspen.

Singh RK, Maurya JP, Azeez A, Miskolczi P, Tylewicz S, Stojkovič K, Delhomme N, Busov V, Bhalerao RP.

Nat Commun. 2018 Oct 9;9(1):4173. doi: 10.1038/s41467-018-06696-y.

10.

Storage lipid accumulation is controlled by photoperiodic signal acting via regulators of growth cessation and dormancy in hybrid aspen.

Grimberg Å, Lager I, Street NR, Robinson KM, Marttila S, Mähler N, Ingvarsson PK, Bhalerao RP.

New Phytol. 2018 Jul;219(2):619-630. doi: 10.1111/nph.15197. Epub 2018 May 15.

11.

Photoperiodic control of seasonal growth is mediated by ABA acting on cell-cell communication.

Tylewicz S, Petterle A, Marttila S, Miskolczi P, Azeez A, Singh RK, Immanen J, Mähler N, Hvidsten TR, Eklund DM, Bowman JL, Helariutta Y, Bhalerao RP.

Science. 2018 Apr 13;360(6385):212-215. doi: 10.1126/science.aan8576. Epub 2018 Mar 8.

PMID:
29519919
12.

Photoperiod- and temperature-mediated control of growth cessation and dormancy in trees: a molecular perspective.

Maurya JP, Bhalerao RP.

Ann Bot. 2017 Sep 1;120(3):351-360. doi: 10.1093/aob/mcx061. Review.

13.

Root hydrotropism is controlled via a cortex-specific growth mechanism.

Dietrich D, Pang L, Kobayashi A, Fozard JA, Boudolf V, Bhosale R, Antoni R, Nguyen T, Hiratsuka S, Fujii N, Miyazawa Y, Bae TW, Wells DM, Owen MR, Band LR, Dyson RJ, Jensen OE, King JR, Tracy SR, Sturrock CJ, Mooney SJ, Roberts JA, Bhalerao RP, Dinneny JR, Rodriguez PL, Nagatani A, Hosokawa Y, Baskin TI, Pridmore TP, De Veylder L, Takahashi H, Bennett MJ.

Nat Plants. 2017 May 8;3:17057. doi: 10.1038/nplants.2017.57.

PMID:
28481327
14.

Ethylene Regulates Differential Growth via BIG ARF-GEF-Dependent Post-Golgi Secretory Trafficking in Arabidopsis.

Jonsson K, Boutté Y, Singh RK, Gendre D, Bhalerao RP.

Plant Cell. 2017 May;29(5):1039-1052. doi: 10.1105/tpc.16.00743. Epub 2017 Apr 24.

15.

Environmental and hormonal control of cambial stem cell dynamics.

Bhalerao RP, Fischer U.

J Exp Bot. 2017 Jan;68(1):79-87. doi: 10.1093/jxb/erw466. Epub 2016 Dec 12. Review.

PMID:
27965368
16.

Photoperiod- and temperature-mediated control of phenology in trees - a molecular perspective.

Singh RK, Svystun T, AlDahmash B, Jönsson AM, Bhalerao RP.

New Phytol. 2017 Jan;213(2):511-524. doi: 10.1111/nph.14346. Epub 2016 Nov 30. Review.

17.

Enrichment of hydroxylated C24- and C26-acyl-chain sphingolipids mediates PIN2 apical sorting at trans-Golgi network subdomains.

Wattelet-Boyer V, Brocard L, Jonsson K, Esnay N, Joubès J, Domergue F, Mongrand S, Raikhel N, Bhalerao RP, Moreau P, Boutté Y.

Nat Commun. 2016 Sep 29;7:12788. doi: 10.1038/ncomms12788.

18.

Cytokinin and Auxin Display Distinct but Interconnected Distribution and Signaling Profiles to Stimulate Cambial Activity.

Immanen J, Nieminen K, Smolander OP, Kojima M, Alonso Serra J, Koskinen P, Zhang J, Elo A, Mähönen AP, Street N, Bhalerao RP, Paulin L, Auvinen P, Sakakibara H, Helariutta Y.

Curr Biol. 2016 Aug 8;26(15):1990-1997. doi: 10.1016/j.cub.2016.05.053. Epub 2016 Jul 14.

19.

Exploring exocytosis using chemical genomics.

Baral A, Bhalerao RP.

Proc Natl Acad Sci U S A. 2016 Jan 5;113(1):14-6. doi: 10.1073/pnas.1522317113. Epub 2015 Dec 23. No abstract available.

20.

Genome Wide Binding Site Analysis Reveals Transcriptional Coactivation of Cytokinin-Responsive Genes by DELLA Proteins.

Marín-de la Rosa N, Pfeiffer A, Hill K, Locascio A, Bhalerao RP, Miskolczi P, Grønlund AL, Wanchoo-Kohli A, Thomas SG, Bennett MJ, Lohmann JU, Blázquez MA, Alabadí D.

PLoS Genet. 2015 Jul 2;11(7):e1005337. doi: 10.1371/journal.pgen.1005337. eCollection 2015 Jul.

21.

Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the Liverwort Marchantia polymorpha.

Eklund DM, Ishizaki K, Flores-Sandoval E, Kikuchi S, Takebayashi Y, Tsukamoto S, Hirakawa Y, Nonomura M, Kato H, Kouno M, Bhalerao RP, Lagercrantz U, Kasahara H, Kohchi T, Bowman JL.

Plant Cell. 2015 Jun;27(6):1650-69. doi: 10.1105/tpc.15.00065. Epub 2015 Jun 2. Erratum in: Plant Cell. 2016 Jan;28(1):266.

22.

Dual role of tree florigen activation complex component FD in photoperiodic growth control and adaptive response pathways.

Tylewicz S, Tsuji H, Miskolczi P, Petterle A, Azeez A, Jonsson K, Shimamoto K, Bhalerao RP.

Proc Natl Acad Sci U S A. 2015 Mar 10;112(10):3140-5. doi: 10.1073/pnas.1423440112. Epub 2015 Feb 23.

23.

Journey to the cell surface--the central role of the trans-Golgi network in plants.

Gendre D, Jonsson K, Boutté Y, Bhalerao RP.

Protoplasma. 2015 Mar;252(2):385-98. doi: 10.1007/s00709-014-0693-1. Epub 2014 Sep 4. Review.

PMID:
25187082
24.

Adventitious root formation in tree species: involvement of transcription factors.

Legué V, Rigal A, Bhalerao RP.

Physiol Plant. 2014 Jun;151(2):192-8. doi: 10.1111/ppl.12197. Review.

PMID:
24666319
25.

A tree ortholog of APETALA1 mediates photoperiodic control of seasonal growth.

Azeez A, Miskolczi P, Tylewicz S, Bhalerao RP.

Curr Biol. 2014 Mar 31;24(7):717-24. doi: 10.1016/j.cub.2014.02.037. Epub 2014 Mar 20.

26.

Auxin gradients across wood-instructive or incidental?

Bhalerao RP, Fischer U.

Physiol Plant. 2014 May;151(1):43-51. doi: 10.1111/ppl.12134. Epub 2013 Dec 27. Review.

PMID:
24286229
27.

Cell wall polysaccharides are mislocalized to the Vacuole in echidna mutants.

McFarlane HE, Watanabe Y, Gendre D, Carruthers K, Levesque-Tremblay G, Haughn GW, Bhalerao RP, Samuels L.

Plant Cell Physiol. 2013 Nov;54(11):1867-80. doi: 10.1093/pcp/pct129. Epub 2013 Sep 20.

PMID:
24058145
28.

ECHIDNA-mediated post-Golgi trafficking of auxin carriers for differential cell elongation.

Boutté Y, Jonsson K, McFarlane HE, Johnson E, Gendre D, Swarup R, Friml J, Samuels L, Robert S, Bhalerao RP.

Proc Natl Acad Sci U S A. 2013 Oct 1;110(40):16259-64. doi: 10.1073/pnas.1309057110. Epub 2013 Sep 16.

29.

Trans-Golgi network localized ECHIDNA/Ypt interacting protein complex is required for the secretion of cell wall polysaccharides in Arabidopsis.

Gendre D, McFarlane HE, Johnson E, Mouille G, Sjödin A, Oh J, Levesque-Tremblay G, Watanabe Y, Samuels L, Bhalerao RP.

Plant Cell. 2013 Jul;25(7):2633-46. doi: 10.1105/tpc.113.112482. Epub 2013 Jul 5.

30.

Daylength mediated control of seasonal growth patterns in perennial trees.

Petterle A, Karlberg A, Bhalerao RP.

Curr Opin Plant Biol. 2013 Jun;16(3):301-6. doi: 10.1016/j.pbi.2013.02.006. Epub 2013 Mar 7. Review.

PMID:
23473967
31.

Group III-A XTH genes of Arabidopsis encode predominant xyloglucan endohydrolases that are dispensable for normal growth.

Kaewthai N, Gendre D, Eklöf JM, Ibatullin FM, Ezcurra I, Bhalerao RP, Brumer H.

Plant Physiol. 2013 Jan;161(1):440-54. doi: 10.1104/pp.112.207308. Epub 2012 Oct 25.

32.

Short day-mediated cessation of growth requires the downregulation of AINTEGUMENTALIKE1 transcription factor in hybrid aspen.

Karlberg A, Bako L, Bhalerao RP.

PLoS Genet. 2011 Nov;7(11):e1002361. doi: 10.1371/journal.pgen.1002361. Epub 2011 Nov 3.

33.

Conserved Arabidopsis ECHIDNA protein mediates trans-Golgi-network trafficking and cell elongation.

Gendre D, Oh J, Boutté Y, Best JG, Samuels L, Nilsson R, Uemura T, Marchant A, Bennett MJ, Grebe M, Bhalerao RP.

Proc Natl Acad Sci U S A. 2011 May 10;108(19):8048-53. doi: 10.1073/pnas.1018371108. Epub 2011 Apr 21.

34.

Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen.

Baba K, Karlberg A, Schmidt J, Schrader J, Hvidsten TR, Bako L, Bhalerao RP.

Proc Natl Acad Sci U S A. 2011 Feb 22;108(8):3418-23. doi: 10.1073/pnas.1011506108. Epub 2011 Feb 2.

35.

Components acting downstream of short day perception regulate differential cessation of cambial activity and associated responses in early and late clones of hybrid poplar.

Resman L, Howe G, Jonsen D, Englund M, Druart N, Schrader J, Antti H, Skinner J, Sjödin A, Chen T, Bhalerao RP.

Plant Physiol. 2010 Nov;154(3):1294-303. doi: 10.1104/pp.110.163907. Epub 2010 Sep 16.

36.

The ectomycorrhizal fungus Laccaria bicolor stimulates lateral root formation in poplar and Arabidopsis through auxin transport and signaling.

Felten J, Kohler A, Morin E, Bhalerao RP, Palme K, Martin F, Ditengou FA, Legué V.

Plant Physiol. 2009 Dec;151(4):1991-2005. doi: 10.1104/pp.109.147231. Epub 2009 Oct 23.

37.

Modular gene expression in Poplar: a multilayer network approach.

Grönlund A, Bhalerao RP, Karlsson J.

New Phytol. 2009 Jan;181(2):315-322. doi: 10.1111/j.1469-8137.2008.02668.x.

38.

Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.

Benhamed M, Martin-Magniette ML, Taconnat L, Bitton F, Servet C, De Clercq R, De Meyer B, Buysschaert C, Rombauts S, Villarroel R, Aubourg S, Beynon J, Bhalerao RP, Coupland G, Gruissem W, Menke FL, Weisshaar B, Renou JP, Zhou DX, Hilson P.

Plant J. 2008 Nov;56(3):493-504. doi: 10.1111/j.1365-313X.2008.03606.x. Epub 2008 Sep 18.

39.

Dissecting the molecular basis of the regulation of wood formation by auxin in hybrid aspen.

Nilsson J, Karlberg A, Antti H, Lopez-Vernaza M, Mellerowicz E, Perrot-Rechenmann C, Sandberg G, Bhalerao RP.

Plant Cell. 2008 Apr;20(4):843-55. doi: 10.1105/tpc.107.055798. Epub 2008 Apr 18.

40.

A molecular timetable for apical bud formation and dormancy induction in poplar.

Ruttink T, Arend M, Morreel K, Storme V, Rombauts S, Fromm J, Bhalerao RP, Boerjan W, Rohde A.

Plant Cell. 2007 Aug;19(8):2370-90. Epub 2007 Aug 10.

41.

Environmental and hormonal regulation of the activity-dormancy cycle in the cambial meristem involves stage-specific modulation of transcriptional and metabolic networks.

Druart N, Johansson A, Baba K, Schrader J, Sjödin A, Bhalerao RR, Resman L, Trygg J, Moritz T, Bhalerao RP.

Plant J. 2007 May;50(4):557-73. Epub 2007 Apr 5.

42.

Plant dormancy in the perennial context.

Rohde A, Bhalerao RP.

Trends Plant Sci. 2007 May;12(5):217-23. Epub 2007 Apr 9. Review.

PMID:
17416545
43.

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).

Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Déjardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjärvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leplé JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouzé P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D.

Science. 2006 Sep 15;313(5793):1596-604.

44.

Assembly of a gene sequence tag microarray by reversible biotin-streptavidin capture for transcript analysis of Arabidopsis thaliana.

Wirta V, Holmberg A, Lukacs M, Nilsson P, Hilson P, Uhlén M, Bhalerao RP, Lundeberg J.

BMC Biotechnol. 2005 Feb 3;5:5.

45.

Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications.

Hilson P, Allemeersch J, Altmann T, Aubourg S, Avon A, Beynon J, Bhalerao RP, Bitton F, Caboche M, Cannoot B, Chardakov V, Cognet-Holliger C, Colot V, Crowe M, Darimont C, Durinck S, Eickhoff H, de Longevialle AF, Farmer EE, Grant M, Kuiper MT, Lehrach H, Léon C, Leyva A, Lundeberg J, Lurin C, Moreau Y, Nietfeld W, Paz-Ares J, Reymond P, Rouzé P, Sandberg G, Segura MD, Serizet C, Tabrett A, Taconnat L, Thareau V, Van Hummelen P, Vercruysse S, Vuylsteke M, Weingartner M, Weisbeek PJ, Wirta V, Wittink FR, Zabeau M, Small I.

Genome Res. 2004 Oct;14(10B):2176-89.

46.

Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome.

Schrader J, Moyle R, Bhalerao R, Hertzberg M, Lundeberg J, Nilsson P, Bhalerao RP.

Plant J. 2004 Oct;40(2):173-87.

47.

A Populus EST resource for plant functional genomics.

Sterky F, Bhalerao RR, Unneberg P, Segerman B, Nilsson P, Brunner AM, Charbonnel-Campaa L, Lindvall JJ, Tandre K, Strauss SH, Sundberg B, Gustafsson P, Uhlén M, Bhalerao RP, Nilsson O, Sandberg G, Karlsson J, Lundeberg J, Jansson S.

Proc Natl Acad Sci U S A. 2004 Sep 21;101(38):13951-6. Epub 2004 Sep 7.

48.

Differential stage-specific regulation of cyclin-dependent kinases during cambial dormancy in hybrid aspen.

Espinosa-Ruiz A, Saxena S, Schmidt J, Mellerowicz E, Miskolczi P, Bakó L, Bhalerao RP.

Plant J. 2004 May;38(4):603-15.

49.

Organellar gene transcription and early seedling development are affected in the rpoT;2 mutant of Arabidopsis.

Baba K, Schmidt J, Espinosa-Ruiz A, Villarejo A, Shiina T, Gardeström P, Sane AP, Bhalerao RP.

Plant J. 2004 Apr;38(1):38-48.

50.

The case for morphogens in plants.

Bhalerao RP, Bennett MJ.

Nat Cell Biol. 2003 Nov;5(11):939-43.

PMID:
14593411

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