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Items: 1 to 50 of 79

1.

Ice ages and butterflyfishes: Phylogenomics elucidates the ecological and evolutionary history of reef fishes in an endemism hotspot.

DiBattista JD, Alfaro ME, Sorenson L, Choat JH, Hobbs JA, Sinclair-Taylor TH, Rocha LA, Chang J, Luiz OJ, Cowman PF, Friedman M, Berumen ML.

Ecol Evol. 2018 Oct 23;8(22):10989-11008. doi: 10.1002/ece3.4566. eCollection 2018 Nov.

2.

Contrasting population genetic structure in three aggregating groupers (Percoidei: Epinephelidae) in the Indo-West Pacific: the importance of reproductive mode.

Ma KY, van Herwerden L, Newman SJ, Berumen ML, Choat JH, Chu KH, Sadovy de Mitcheson Y.

BMC Evol Biol. 2018 Dec 4;18(1):180. doi: 10.1186/s12862-018-1284-0.

3.

Morphological and genetic divergence between Mediterranean and Caribbean populations of Madracis pharensis (Heller 1868) (Scleractinia, Pocilloporidae): too much for one species?

Benzoni F, Arrigoni R, Berumen ML, Taviani M, Bongaerts P, Frade PR.

Zootaxa. 2018 Sep 6;4471(3):473-492. doi: 10.11646/zootaxa.4471.3.3.

PMID:
30313392
4.

Finding Nemo's Genes: A chromosome-scale reference assembly of the genome of the orange clownfish Amphiprion percula.

Lehmann R, Lightfoot DJ, Schunter C, Michell CT, Ohyanagi H, Mineta K, Foret S, Berumen ML, Miller DJ, Aranda M, Gojobori T, Munday PL, Ravasi T.

Mol Ecol Resour. 2018 Sep 10. doi: 10.1111/1755-0998.12939. [Epub ahead of print]

PMID:
30203521
5.

Corrigendum to "Microplastic in the gastrointestinal tract of fishes along the Saudi Arabian Red Sea coast" [Mar. Pollut. Bull. 131 (Part A) (2018) 1-808].

Baalkhuyur FM, Bin Dohaish EA, Elhalwagy MEA, Alikunhi NM, AlSuwailem AM, Røstad A, Coker DJ, Berumen ML, Duarte CM.

Mar Pollut Bull. 2019 Feb;139:470. doi: 10.1016/j.marpolbul.2018.08.015. Epub 2018 Aug 29. No abstract available.

PMID:
30170742
6.

Comparison of cryptobenthic reef fish communities among microhabitats in the Red Sea.

Troyer EM, Coker DJ, Berumen ML.

PeerJ. 2018 Jun 18;6:e5014. doi: 10.7717/peerj.5014. eCollection 2018.

7.

Lack of host specificity of copepod crustaceans associated with mushroom corals in the Red Sea.

Ivanenko VN, Hoeksema BW, Mudrova SV, Nikitin MA, Martínez A, Rimskaya-Korsakova NN, Berumen ML, Fontaneto D.

Mol Phylogenet Evol. 2018 Oct;127:770-780. doi: 10.1016/j.ympev.2018.06.024. Epub 2018 Jun 15.

PMID:
29908997
8.

Microplastic in the gastrointestinal tract of fishes along the Saudi Arabian Red Sea coast.

Baalkhuyur FM, Bin Dohaish EA, Elhalwagy MEA, Alikunhi NM, AlSuwailem AM, Røstad A, Coker DJ, Berumen ML, Duarte CM.

Mar Pollut Bull. 2018 Jun;131(Pt A):407-415. doi: 10.1016/j.marpolbul.2018.04.040. Epub 2018 Apr 24. Erratum in: Mar Pollut Bull. 2019 Feb;139:470.

PMID:
29886965
9.

Cross-shelf investigation of coral reef cryptic benthic organisms reveals diversity patterns of the hidden majority.

Pearman JK, Leray M, Villalobos R, Machida RJ, Berumen ML, Knowlton N, Carvalho S.

Sci Rep. 2018 May 24;8(1):8090. doi: 10.1038/s41598-018-26332-5.

10.

A new species of Arachnanthus from the Red Sea (Cnidaria, Ceriantharia).

Stampar SN, Didi SOE, Paulay G, Berumen ML.

Zookeys. 2018 Apr 4;(748):1-10. doi: 10.3897/zookeys.748.22914. eCollection 2018.

11.

In situ observations of coral bleaching in the central Saudi Arabian Red Sea during the 2015/2016 global coral bleaching event.

Monroe AA, Ziegler M, Roik A, Röthig T, Hardenstine RS, Emms MA, Jensen T, Voolstra CR, Berumen ML.

PLoS One. 2018 Apr 19;13(4):e0195814. doi: 10.1371/journal.pone.0195814. eCollection 2018.

12.

Convergence of marine megafauna movement patterns in coastal and open oceans.

Sequeira AMM, Rodríguez JP, Eguíluz VM, Harcourt R, Hindell M, Sims DW, Duarte CM, Costa DP, Fernández-Gracia J, Ferreira LC, Hays GC, Heupel MR, Meekan MG, Aven A, Bailleul F, Baylis AMM, Berumen ML, Braun CD, Burns J, Caley MJ, Campbell R, Carmichael RH, Clua E, Einoder LD, Friedlaender A, Goebel ME, Goldsworthy SD, Guinet C, Gunn J, Hamer D, Hammerschlag N, Hammill M, Hückstädt LA, Humphries NE, Lea MA, Lowther A, Mackay A, McHuron E, McKenzie J, McLeay L, McMahon CR, Mengersen K, Muelbert MMC, Pagano AM, Page B, Queiroz N, Robinson PW, Shaffer SA, Shivji M, Skomal GB, Thorrold SR, Villegas-Amtmann S, Weise M, Wells R, Wetherbee B, Wiebkin A, Wienecke B, Thums M.

Proc Natl Acad Sci U S A. 2018 Mar 20;115(12):3072-3077. doi: 10.1073/pnas.1716137115. Epub 2018 Feb 26.

13.

Spatial and temporal patterns of mass bleaching of corals in the Anthropocene.

Hughes TP, Anderson KD, Connolly SR, Heron SF, Kerry JT, Lough JM, Baird AH, Baum JK, Berumen ML, Bridge TC, Claar DC, Eakin CM, Gilmour JP, Graham NAJ, Harrison H, Hobbs JA, Hoey AS, Hoogenboom M, Lowe RJ, McCulloch MT, Pandolfi JM, Pratchett M, Schoepf V, Torda G, Wilson SK.

Science. 2018 Jan 5;359(6371):80-83. doi: 10.1126/science.aan8048.

PMID:
29302011
14.

Comparative population genetic structure of redbelly tilapia (Coptodon zillii (Gervais, 1848)) from three different aquatic habitats in Egypt.

Soliman T, Aly W, Fahim RM, Berumen ML, Jenke-Kodama H, Bernardi G.

Ecol Evol. 2017 Nov 15;7(24):11092-11099. doi: 10.1002/ece3.3586. eCollection 2017 Dec.

15.

Corals hosting symbiotic hydrozoans are less susceptible to predation and disease.

Montano S, Fattorini S, Parravicini V, Berumen ML, Galli P, Maggioni D, Arrigoni R, Seveso D, Strona G.

Proc Biol Sci. 2017 Dec 20;284(1869). pii: 20172405. doi: 10.1098/rspb.2017.2405.

16.

Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish.

Harrison HB, Berumen ML, Saenz-Agudelo P, Salas E, Williamson DH, Jones GP.

Mol Ecol. 2017 Oct;26(20):5692-5704. doi: 10.1111/mec.14279.

PMID:
29080371
17.

The prevalence of benthic dinoflagellates associated with ciguatera fish poisoning in the central Red Sea.

Catania D, Richlen ML, Mak YL, Morton SL, Laban EH, Xu Y, Anderson DM, Chan LL, Berumen ML.

Harmful Algae. 2017 Sep;68:206-216. doi: 10.1016/j.hal.2017.08.005. Epub 2017 Sep 9.

PMID:
28962981
18.

Genomic diversification of giant enteric symbionts reflects host dietary lifestyles.

Ngugi DK, Miyake S, Cahill M, Vinu M, Hackmann TJ, Blom J, Tietbohl MD, Berumen ML, Stingl U.

Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):E7592-E7601. doi: 10.1073/pnas.1703070114. Epub 2017 Aug 23.

19.

Larval fish dispersal in a coral-reef seascape.

Almany GR, Planes S, Thorrold SR, Berumen ML, Bode M, Saenz-Agudelo P, Bonin MC, Frisch AJ, Harrison HB, Messmer V, Nanninga GB, Priest MA, Srinivasan M, Sinclair-Taylor T, Williamson DH, Jones GP.

Nat Ecol Evol. 2017 May 8;1(6):148. doi: 10.1038/s41559-017-0148.

PMID:
28812625
20.

Exploring the larval fish community of the central Red Sea with an integrated morphological and molecular approach.

Isari S, Pearman JK, Casas L, Michell CT, Curdia J, Berumen ML, Irigoien X.

PLoS One. 2017 Aug 3;12(8):e0182503. doi: 10.1371/journal.pone.0182503. eCollection 2017.

21.

Spatial variation in coral reef fish and benthic communities in the central Saudi Arabian Red Sea.

Khalil MT, Bouwmeester J, Berumen ML.

PeerJ. 2017 Jun 6;5:e3410. doi: 10.7717/peerj.3410. eCollection 2017.

22.

Using a butterflyfish genome as a general tool for RAD-Seq studies in specialized reef fish.

DiBattista JD, Saenz-Agudelo P, Piatek MJ, Wang X, Aranda M, Berumen ML.

Mol Ecol Resour. 2017 Nov;17(6):1330-1341. doi: 10.1111/1755-0998.12662. Epub 2017 Apr 6.

PMID:
28236665
23.

Habitat Use and Spatial Variability of Hawkfishes with a Focus on Colour Polymorphism in Paracirrhites forsteri.

Coker DJ, Chaidez V, Berumen ML.

PLoS One. 2017 Jan 26;12(1):e0169079. doi: 10.1371/journal.pone.0169079. eCollection 2017.

24.

Marine Dispersal Scales Are Congruent over Evolutionary and Ecological Time.

Pinsky ML, Saenz-Agudelo P, Salles OC, Almany GR, Bode M, Berumen ML, Andréfouët S, Thorrold SR, Jones GP, Planes S.

Curr Biol. 2017 Jan 9;27(1):149-154. doi: 10.1016/j.cub.2016.10.053. Epub 2016 Dec 15.

25.

Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park.

Williamson DH, Harrison HB, Almany GR, Berumen ML, Bode M, Bonin MC, Choukroun S, Doherty PJ, Frisch AJ, Saenz-Agudelo P, Jones GP.

Mol Ecol. 2016 Dec;25(24):6039-6054. doi: 10.1111/mec.13908. Epub 2016 Dec 9.

PMID:
27862567
26.

First genealogy for a wild marine fish population reveals multigenerational philopatry.

Salles OC, Pujol B, Maynard JA, Almany GR, Berumen ML, Jones GP, Saenz-Agudelo P, Srinivasan M, Thorrold SR, Planes S.

Proc Natl Acad Sci U S A. 2016 Nov 15;113(46):13245-13250. Epub 2016 Oct 31.

27.

Recent origin and semi-permeable species boundaries in the scleractinian coral genus Stylophora from the Red Sea.

Arrigoni R, Benzoni F, Terraneo TI, Caragnano A, Berumen ML.

Sci Rep. 2016 Oct 7;6:34612. doi: 10.1038/srep34612.

28.

Species delimitation in the reef coral genera Echinophyllia and Oxypora (Scleractinia, Lobophylliidae) with a description of two new species.

Arrigoni R, Berumen ML, Chen CA, Terraneo TI, Baird AH, Payri C, Benzoni F.

Mol Phylogenet Evol. 2016 Dec;105:146-159. doi: 10.1016/j.ympev.2016.08.023. Epub 2016 Sep 1.

PMID:
27593164
29.

Seascape and life-history traits do not predict self-recruitment in a coral reef fish.

Herrera M, Nanninga GB, Planes S, Jones GP, Thorrold SR, Saenz-Agudelo P, Almany GR, Berumen ML.

Biol Lett. 2016 Aug;12(8). pii: 20160309. doi: 10.1098/rsbl.2016.0309.

30.

Draft genome of an iconic Red Sea reef fish, the blacktail butterflyfish (Chaetodon austriacus): current status and its characteristics.

DiBattista JD, Wang X, Saenz-Agudelo P, Piatek MJ, Aranda M, Berumen ML.

Mol Ecol Resour. 2018 Mar;18(2):347-355. doi: 10.1111/1755-0998.12588. Epub 2016 Aug 29.

PMID:
27488138
31.

Population structure of a whale shark Rhincodon typus aggregation in the Red Sea.

Cochran JE, Hardenstine RS, Braun CD, Skomal GB, Thorrold SR, Xu K, Genton MG, Berumen ML.

J Fish Biol. 2016 Sep;89(3):1570-82. doi: 10.1111/jfb.13054. Epub 2016 Jul 11.

PMID:
27401632
32.

Species delimitation in the coral genus Goniopora (Scleractinia, Poritidae) from the Saudi Arabian Red Sea.

Terraneo TI, Benzoni F, Arrigoni R, Berumen ML.

Mol Phylogenet Evol. 2016 Sep;102:278-94. doi: 10.1016/j.ympev.2016.06.003. Epub 2016 Jun 16.

PMID:
27321092
33.

Coral mass spawning predicted by rapid seasonal rise in ocean temperature.

Keith SA, Maynard JA, Edwards AJ, Guest JR, Bauman AG, van Hooidonk R, Heron SF, Berumen ML, Bouwmeester J, Piromvaragorn S, Rahbek C, Baird AH.

Proc Biol Sci. 2016 May 11;283(1830). pii: 20160011. doi: 10.1098/rspb.2016.0011.

34.

Surgeons and suture zones: Hybridization among four surgeonfish species in the Indo-Pacific with variable evolutionary outcomes.

DiBattista JD, Whitney J, Craig MT, Hobbs JA, Rocha LA, Feldheim KA, Berumen ML, Bowen BW.

Mol Phylogenet Evol. 2016 Aug;101:203-215. doi: 10.1016/j.ympev.2016.04.036. Epub 2016 Apr 30.

PMID:
27143241
35.

Restricted grouper reproductive migrations support community-based management.

Waldie PA, Almany GR, Sinclair-Taylor TH, Hamilton RJ, Potuku T, Priest MA, Rhodes KL, Robinson J, Cinner JE, Berumen ML.

R Soc Open Sci. 2016 Mar 9;3(3):150694. doi: 10.1098/rsos.150694. eCollection 2016 Mar.

36.

Regal phylogeography: Range-wide survey of the marine angelfish Pygoplites diacanthus reveals evolutionary partitions between the Red Sea, Indian Ocean, and Pacific Ocean.

Coleman RR, Eble JA, DiBattista JD, Rocha LA, Randall JE, Berumen ML, Bowen BW.

Mol Phylogenet Evol. 2016 Jul;100:243-253. doi: 10.1016/j.ympev.2016.04.005. Epub 2016 Apr 8.

PMID:
27068838
37.

Hologenome analysis of two marine sponges with different microbiomes.

Ryu T, Seridi L, Moitinho-Silva L, Oates M, Liew YJ, Mavromatis C, Wang X, Haywood A, Lafi FF, Kupresanin M, Sougrat R, Alzahrani MA, Giles E, Ghosheh Y, Schunter C, Baumgarten S, Berumen ML, Gao X, Aranda M, Foret S, Gough J, Voolstra CR, Hentschel U, Ravasi T.

BMC Genomics. 2016 Feb 29;17:158. doi: 10.1186/s12864-016-2501-0.

38.

Green Fluorescence of Cytaeis Hydroids Living in Association with Nassarius Gastropods in the Red Sea.

Prudkovsky AA, Ivanenko VN, Nikitin MA, Lukyanov KA, Belousova A, Reimer JD, Berumen ML.

PLoS One. 2016 Feb 3;11(2):e0146861. doi: 10.1371/journal.pone.0146861. eCollection 2016.

39.

Molecular biodiversity of Red Sea demosponges.

Erpenbeck D, Voigt O, Al-Aidaroos AM, Berumen ML, Büttner G, Catania D, Guirguis AN, Paulay G, Schätzle S, Wörheide G.

Mar Pollut Bull. 2016 Apr 30;105(2):507-14. doi: 10.1016/j.marpolbul.2015.12.004. Epub 2016 Jan 7.

PMID:
26776057
40.

Productivity and sea surface temperature are correlated with the pelagic larval duration of damselfishes in the Red Sea.

Robitzch VS, Lozano-Cortés D, Kandler NM, Salas E, Berumen ML.

Mar Pollut Bull. 2016 Apr 30;105(2):566-74. doi: 10.1016/j.marpolbul.2015.11.045. Epub 2015 Dec 1.

PMID:
26654297
41.

Regional variation in the structure and function of parrotfishes on Arabian reefs.

Hoey AS, Feary DA, Burt JA, Vaughan G, Pratchett MS, Berumen ML.

Mar Pollut Bull. 2016 Apr 30;105(2):524-31. doi: 10.1016/j.marpolbul.2015.11.035. Epub 2015 Nov 19.

PMID:
26608505
42.

Homogeneity of coral reef communities across 8 degrees of latitude in the Saudi Arabian Red Sea.

Roberts MB, Jones GP, McCormick MI, Munday PL, Neale S, Thorrold S, Robitzch VS, Berumen ML.

Mar Pollut Bull. 2016 Apr 30;105(2):558-65. doi: 10.1016/j.marpolbul.2015.11.024. Epub 2015 Nov 20.

PMID:
26608504
43.

Tracing carbon flow through coral reef food webs using a compound-specific stable isotope approach.

McMahon KW, Thorrold SR, Houghton LA, Berumen ML.

Oecologia. 2016 Mar;180(3):809-21. doi: 10.1007/s00442-015-3475-3. Epub 2015 Nov 21.

PMID:
26590916
44.

The role of marine reserves in the replenishment of a locally impacted population of anemonefish on the Great Barrier Reef.

Bonin MC, Harrison HB, Williamson DH, Frisch AJ, Saenz-Agudelo P, Berumen ML, Jones GP.

Mol Ecol. 2016 Jan;25(2):487-99. doi: 10.1111/mec.13484. Epub 2016 Jan 19.

PMID:
26589106
45.

Coral reef fish populations can persist without immigration.

Salles OC, Maynard JA, Joannides M, Barbu CM, Saenz-Agudelo P, Almany GR, Berumen ML, Thorrold SR, Jones GP, Planes S.

Proc Biol Sci. 2015 Nov 22;282(1819). pii: 20151311. doi: 10.1098/rspb.2015.1311.

46.

Seascape genetics along environmental gradients in the Arabian Peninsula: insights from ddRAD sequencing of anemonefishes.

Saenz-Agudelo P, Dibattista JD, Piatek MJ, Gaither MR, Harrison HB, Nanninga GB, Berumen ML.

Mol Ecol. 2015 Dec;24(24):6241-55. doi: 10.1111/mec.13471. Epub 2015 Dec 12.

PMID:
26577830
47.

Colony size-frequency distribution of pocilloporid juvenile corals along a natural environmental gradient in the Red Sea.

Lozano-Cortés DF, Berumen ML.

Mar Pollut Bull. 2016 Apr 30;105(2):546-52. doi: 10.1016/j.marpolbul.2015.10.051. Epub 2015 Oct 29.

PMID:
26520210
48.

Development of polymorphic microsatellite loci for conservation genetic studies of the coral reef fish Centropyge bicolor.

Herrera M, Saenz-Agudelo P, Nanninga GB, Berumen ML.

J Fish Biol. 2015 Sep;87(3):748-53. doi: 10.1111/jfb.12694. Epub 2015 Aug 14.

PMID:
26272332
49.

Exploring seascape genetics and kinship in the reef sponge Stylissa carteri in the Red Sea.

Giles EC, Saenz-Agudelo P, Hussey NE, Ravasi T, Berumen ML.

Ecol Evol. 2015 Jul;5(13):2487-502. doi: 10.1002/ece3.1511. Epub 2015 Jun 1.

50.

Population genetics of four heavily exploited shark species around the Arabian Peninsula.

Spaet JL, Jabado RW, Henderson AC, Moore AB, Berumen ML.

Ecol Evol. 2015 Jun;5(12):2317-32. doi: 10.1002/ece3.1515. Epub 2015 May 20.

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