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Items: 1 to 50 of 110

1.

Uncovering microbial inter-domain interactions in complex communities.

Florenza J, Tamminen M, Bertilsson S.

Philos Trans R Soc Lond B Biol Sci. 2019 Nov 25;374(1786):20190087. doi: 10.1098/rstb.2019.0087. Epub 2019 Oct 7.

PMID:
31587646
2.

Molecular Basis and Ecological Relevance of Caulobacter Cell Filamentation in Freshwater Habitats.

Heinrich K, Leslie DJ, Morlock M, Bertilsson S, Jonas K.

MBio. 2019 Aug 20;10(4). pii: e01557-19. doi: 10.1128/mBio.01557-19.

3.

Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters.

Lopez-Fernandez M, Broman E, Simone D, Bertilsson S, Dopson M.

MBio. 2019 Aug 13;10(4). pii: e01470-19. doi: 10.1128/mBio.01470-19.

4.

High-Fat Diet Enriched with Bilberry Modifies Colonic Mucus Dynamics and Restores Marked Alterations of Gut Microbiome in Rats.

Liu HY, Walden TB, Ahl D, Nyman M, Bertilsson S, Phillipson M, Holm L.

Mol Nutr Food Res. 2019 Oct;63(20):e1900117. doi: 10.1002/mnfr.201900117. Epub 2019 Aug 12.

PMID:
31336403
5.

Dietary Fiber in Bilberry Ameliorates Pre-Obesity Events in Rats by Regulating Lipid Depot, Cecal Short-Chain Fatty Acid Formation and Microbiota Composition.

Liu HY, Walden TB, Cai D, Ahl D, Bertilsson S, Phillipson M, Nyman M, Holm L.

Nutrients. 2019 Jun 15;11(6). pii: E1350. doi: 10.3390/nu11061350.

6.

Antibiotic therapy in acute pancreatitis: From global overuse to evidence based recommendations.

Párniczky A, Lantos T, Tóth EM, Szakács Z, Gódi S, Hágendorn R, Illés D, Koncz B, Márta K, Mikó A, Mosztbacher D, Németh BC, Pécsi D, Szabó A, Szücs Á, Varjú P, Szentesi A, Darvasi E, Erőss B, Izbéki F, Gajdán L, Halász A, Vincze Á, Szabó I, Pár G, Bajor J, Sarlós P, Czimmer J, Hamvas J, Takács T, Szepes Z, Czakó L, Varga M, Novák J, Bod B, Szepes A, Sümegi J, Papp M, Góg C, Török I, Huang W, Xia Q, Xue P, Li W, Chen W, Shirinskaya NV, Poluektov VL, Shirinskaya AV, Hegyi PJ, Bátovský M, Rodriguez-Oballe JA, Salas IM, Lopez-Diaz J, Dominguez-Munoz JE, Molero X, Pando E, Ruiz-Rebollo ML, Burgueño-Gómez B, Chang YT, Chang MC, Sud A, Moore D, Sutton R, Gougol A, Papachristou GI, Susak YM, Tiuliukin IO, Gomes AP, Oliveira MJ, Aparício DJ, Tantau M, Kurti F, Kovacheva-Slavova M, Stecher SS, Mayerle J, Poropat G, Das K, Marino MV, Capurso G, Małecka-Panas E, Zatorski H, Gasiorowska A, Fabisiak N, Ceranowicz P, Kuśnierz-Cabala B, Carvalho JR, Fernandes SR, Chang JH, Choi EK, Han J, Bertilsson S, Jumaa H, Sandblom G, Kacar S, Baltatzis M, Varabei AV, Yeshy V, Chooklin S, Kozachenko A, Veligotsky N, Hegyi P; Hungarian Pancreatic Study Group.

Pancreatology. 2019 Jun;19(4):488-499. doi: 10.1016/j.pan.2019.04.003. Epub 2019 Apr 19.

PMID:
31068256
7.

Mercury methylating microbial communities of boreal forest soils.

Xu J, Buck M, Eklöf K, Ahmed OO, Schaefer JK, Bishop K, Skyllberg U, Björn E, Bertilsson S, Bravo AG.

Sci Rep. 2019 Jan 24;9(1):518. doi: 10.1038/s41598-018-37383-z.

8.

Freshwater carbon and nutrient cycles revealed through reconstructed population genomes.

Linz AM, He S, Stevens SLR, Anantharaman K, Rohwer RR, Malmstrom RR, Bertilsson S, McMahon KD.

PeerJ. 2018 Dec 10;6:e6075. doi: 10.7717/peerj.6075. eCollection 2018.

9.

Depth and Dissolved Organic Carbon Shape Microbial Communities in Surface Influenced but Not Ancient Saline Terrestrial Aquifers.

Lopez-Fernandez M, Åström M, Bertilsson S, Dopson M.

Front Microbiol. 2018 Nov 27;9:2880. doi: 10.3389/fmicb.2018.02880. eCollection 2018.

10.

Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere.

Lopez-Fernandez M, Simone D, Wu X, Soler L, Nilsson E, Holmfeldt K, Lantz H, Bertilsson S, Dopson M.

MBio. 2018 Nov 20;9(6). pii: e01792-18. doi: 10.1128/mBio.01792-18.

11.

Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes.

Alneberg J, Karlsson CMG, Divne AM, Bergin C, Homa F, Lindh MV, Hugerth LW, Ettema TJG, Bertilsson S, Andersson AF, Pinhassi J.

Microbiome. 2018 Sep 28;6(1):173. doi: 10.1186/s40168-018-0550-0.

12.

Methanogens and Iron-Reducing Bacteria: the Overlooked Members of Mercury-Methylating Microbial Communities in Boreal Lakes.

Bravo AG, Peura S, Buck M, Ahmed O, Mateos-Rivera A, Herrero Ortega S, Schaefer JK, Bouchet S, Tolu J, Björn E, Bertilsson S.

Appl Environ Microbiol. 2018 Nov 15;84(23). pii: e01774-18. doi: 10.1128/AEM.01774-18. Print 2018 Dec 1.

13.

Temporal variability of bacterioplankton is habitat driven.

Obertegger U, Bertilsson S, Pindo M, Larger S, Flaim G.

Mol Ecol. 2018 Nov;27(21):4322-4335. doi: 10.1111/mec.14855. Epub 2018 Sep 26.

PMID:
30176079
14.

Survival of Campylobacter jejuni and Campylobacter coli water isolates in lake and well water.

Nilsson A, Johansson C, Skarp A, Kaden R, Bertilsson S, Rautelin H.

APMIS. 2018 Sep;126(9):762-770. doi: 10.1111/apm.12879.

PMID:
30160017
15.

Investigation of viable taxa in the deep terrestrial biosphere suggests high rates of nutrient recycling.

Lopez-Fernandez M, Broman E, Turner S, Wu X, Bertilsson S, Dopson M.

FEMS Microbiol Ecol. 2018 Aug 1;94(8). doi: 10.1093/femsec/fiy121.

16.

An in vitro evaluation of browser and grazer fermentation efficiency and microbiota using European moose spring and summer foods.

Krizsan SJ, Mateos-Rivera A, Bertilsson S, Felton A, Anttila A, Ramin M, Vaga M, Gidlund H, Huhtanen P.

Ecol Evol. 2018 Mar 31;8(8):4183-4196. doi: 10.1002/ece3.3920. eCollection 2018 Apr.

17.

Inter-laboratory testing of the effect of DNA blocking reagent G2 on DNA extraction from low-biomass clay samples.

Jacobsen CS, Nielsen TK, Vester JK, Stougaard P, Nielsen JL, Voriskova J, Winding A, Baldrian P, Liu B, Frostegård Å, Pedersen D, Tveit AT, Svenning MM, Tebbe CC, Øvreås L, Jakobsen PB, Blazewicz SJ, Hubablek V, Bertilsson S, Hansen LH, Cary SC, Holben WE, Ekelund F, Bælum J.

Sci Rep. 2018 Apr 9;8(1):5711. doi: 10.1038/s41598-018-24082-y.

18.

Presence of Aedes and Anopheles mosquito larvae is correlated to bacteria found in domestic water-storage containers.

Nilsson LKJ, Sharma A, Bhatnagar RK, Bertilsson S, Terenius O.

FEMS Microbiol Ecol. 2018 Jun 1;94(6). doi: 10.1093/femsec/fiy058.

PMID:
29617987
19.

Serum Osteopontin Is Associated With Organ Failure in Patients With Acute Pancreatitis.

Swärd P, Bertilsson S, Struglics A, Kalaitzakis E.

Pancreas. 2018 Mar;47(3):e7-e10. doi: 10.1097/MPA.0000000000000991. No abstract available.

PMID:
29424811
20.

Geobacteraceae are important members of mercury-methylating microbial communities of sediments impacted by waste water releases.

Bravo AG, Zopfi J, Buck M, Xu J, Bertilsson S, Schaefer JK, Poté J, Cosio C.

ISME J. 2018 Mar;12(3):802-812. doi: 10.1038/s41396-017-0007-7. Epub 2018 Jan 10.

21.

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations.

Garcia SL, Stevens SLR, Crary B, Martinez-Garcia M, Stepanauskas R, Woyke T, Tringe SG, Andersson SGE, Bertilsson S, Malmstrom RR, McMahon KD.

ISME J. 2018 Mar;12(3):742-755. doi: 10.1038/s41396-017-0001-0. Epub 2017 Dec 8.

22.

Influence of pulsed and continuous substrate inputs on freshwater bacterial community composition and functioning in bioreactors.

Ricão Canelhas M, Andersson M, Eiler A, Lindström ES, Bertilsson S.

Environ Microbiol. 2017 Dec;19(12):5078-5087. doi: 10.1111/1462-2920.13979. Epub 2017 Dec 4.

PMID:
29124844
23.

Vitamin and Amino Acid Auxotrophy in Anaerobic Consortia Operating under Methanogenic Conditions.

Hubalek V, Buck M, Tan B, Foght J, Wendeberg A, Berry D, Bertilsson S, Eiler A.

mSystems. 2017 Oct 31;2(5). pii: e00038-17. doi: 10.1128/mSystems.00038-17. eCollection 2017 Sep-Oct.

24.

Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes.

He S, Stevens SLR, Chan LK, Bertilsson S, Glavina Del Rio T, Tringe SG, Malmstrom RR, McMahon KD.

mSphere. 2017 Sep 27;2(5). pii: e00277-17. doi: 10.1128/mSphere.00277-17. eCollection 2017 Sep-Oct.

25.

Formation of mercury methylation hotspots as a consequence of forestry operations.

Eklöf K, Bishop K, Bertilsson S, Björn E, Buck M, Skyllberg U, Osman OA, Kronberg RM, Bravo AG.

Sci Total Environ. 2018 Feb 1;613-614:1069-1078. doi: 10.1016/j.scitotenv.2017.09.151. Epub 2017 Sep 22.

PMID:
28950669
26.

Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI.

Hamilton JJ, Garcia SL, Brown BS, Oyserman BO, Moya-Flores F, Bertilsson S, Malmstrom RR, Forest KT, McMahon KD.

mSystems. 2017 Aug 29;2(4). pii: e00091-17. doi: 10.1128/mSystems.00091-17. eCollection 2017 Jul-Aug.

27.

Emerging microbiota during cold storage and temperature abuse of ready-to-eat salad​.

Söderqvist K, Ahmed Osman O, Wolff C, Bertilsson S, Vågsholm I, Boqvist S.

Infect Ecol Epidemiol. 2017 Jun 6;7(1):1328963. doi: 10.1080/20008686.2017.1328963. eCollection 2017.

28.

Acute Pancreatitis: Impact of Alcohol Consumption and Seasonal Factors.

Bertilsson S, Håkansson A, Kalaitzakis E.

Alcohol Alcohol. 2017 May 1;52(3):383-389. doi: 10.1093/alcalc/agx005.

PMID:
28430933
29.

Mixing of water masses caused by a drifting iceberg affects bacterial activity, community composition and substrate utilization capability in the Southern Ocean.

Dinasquet J, Richert I, Logares R, Yager P, Bertilsson S, Riemann L.

Environ Microbiol. 2017 Jun;19(6):2453-2467. doi: 10.1111/1462-2920.13769. Epub 2017 May 26.

PMID:
28429510
30.

How to see more: double hybridization to reveal ecological differentiation among close bacterial relatives.

Bertilsson S.

Environ Microbiol. 2017 Jun;19(6):2110-2111. doi: 10.1111/1462-2920.13740. Epub 2017 May 5. No abstract available.

PMID:
28371149
31.

Potential for hydrogen-oxidizing chemolithoautotrophic and diazotrophic populations to initiate biofilm formation in oligotrophic, deep terrestrial subsurface waters.

Wu X, Pedersen K, Edlund J, Eriksson L, Åström M, Andersson AF, Bertilsson S, Dopson M.

Microbiome. 2017 Mar 23;5(1):37. doi: 10.1186/s40168-017-0253-y.

32.

Seasonal Variation in Abundance and Diversity of Bacterial Methanotrophs in Five Temperate Lakes.

Samad MS, Bertilsson S.

Front Microbiol. 2017 Feb 3;8:142. doi: 10.3389/fmicb.2017.00142. eCollection 2017.

33.

Molecular composition of organic matter controls methylmercury formation in boreal lakes.

Bravo AG, Bouchet S, Tolu J, Björn E, Mateos-Rivera A, Bertilsson S.

Nat Commun. 2017 Feb 9;8:14255. doi: 10.1038/ncomms14255.

34.

Interactions of Freshwater Cyanobacteria with Bacterial Antagonists.

Osman OA, Beier S, Grabherr M, Bertilsson S.

Appl Environ Microbiol. 2017 Mar 17;83(7). pii: e02634-16. doi: 10.1128/AEM.02634-16. Print 2017 Apr 1.

35.

Habitat generalists and specialists in microbial communities across a terrestrial-freshwater gradient.

Monard C, Gantner S, Bertilsson S, Hallin S, Stenlid J.

Sci Rep. 2016 Nov 25;6:37719. doi: 10.1038/srep37719.

36.

Effects of multiple dimensions of bacterial diversity on functioning, stability and multifunctionality.

Roger F, Bertilsson S, Langenheder S, Osman OA, Gamfeldt L.

Ecology. 2016 Oct;97(10):2716-2728. doi: 10.1002/ecy.1518. Epub 2016 Sep 15.

PMID:
27859115
37.

Microproteinuria Predicts Organ Failure in Patients Presenting with Acute Pancreatitis.

Bertilsson S, Swärd P, Håkansson A, Tofik R, Rippe B, Kalaitzakis E.

Dig Dis Sci. 2016 Dec;61(12):3592-3601. Epub 2016 Oct 12.

PMID:
27734249
38.

Connectivity to the surface determines diversity patterns in subsurface aquifers of the Fennoscandian shield.

Hubalek V, Wu X, Eiler A, Buck M, Heim C, Dopson M, Bertilsson S, Ionescu D.

ISME J. 2016 Oct;10(10):2556. doi: 10.1038/ismej.2016.94. No abstract available.

39.

Cryptosporidium as a testbed for single cell genome characterization of unicellular eukaryotes.

Troell K, Hallström B, Divne AM, Alsmark C, Arrighi R, Huss M, Beser J, Bertilsson S.

BMC Genomics. 2016 Jun 23;17:471. doi: 10.1186/s12864-016-2815-y.

40.

Connectivity to the surface determines diversity patterns in subsurface aquifers of the Fennoscandian shield.

Hubalek V, Wu X, Eiler A, Buck M, Heim C, Dopson M, Bertilsson S, Ionescu D.

ISME J. 2016 Oct;10(10):2447-58. doi: 10.1038/ismej.2016.36. Epub 2016 Mar 29. Erratum in: ISME J. 2016 Oct;10(10):2556.

41.

Dysfunction of Circulating Polymorphonuclear Leukocytes and Monocytes in Ambulatory Cirrhotics Predicts Patient Outcome.

Sargenti K, Johansson Å, Bertilsson S, Mattsby-Baltzer I, Klintman D, Kalaitzakis E.

Dig Dis Sci. 2016 Aug;61(8):2294-2302. doi: 10.1007/s10620-016-4132-3. Epub 2016 Mar 24.

PMID:
27010544
42.

Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria.

Eiler A, Mondav R, Sinclair L, Fernandez-Vidal L, Scofield DG, Schwientek P, Martinez-Garcia M, Torrents D, McMahon KD, Andersson SG, Stepanauskas R, Woyke T, Bertilsson S.

ISME J. 2016 Aug;10(8):1902-14. doi: 10.1038/ismej.2015.260. Epub 2016 Jan 19.

43.

Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations.

Bendall ML, Stevens SL, Chan LK, Malfatti S, Schwientek P, Tremblay J, Schackwitz W, Martin J, Pati A, Bushnell B, Froula J, Kang D, Tringe SG, Bertilsson S, Moran MA, Shade A, Newton RJ, McMahon KD, Malmstrom RR.

ISME J. 2016 Jul;10(7):1589-601. doi: 10.1038/ismej.2015.241. Epub 2016 Jan 8.

44.

Are freshwater bacterioplankton indifferent to variable types of amino acid substrates?

Ricão Canelhas M, Eiler A, Bertilsson S.

FEMS Microbiol Ecol. 2016 Feb;92(2). pii: fiw005. doi: 10.1093/femsec/fiw005. Epub 2016 Jan 5.

PMID:
26738554
45.

Metagenome-Based Metabolic Reconstruction Reveals the Ecophysiological Function of Epsilonproteobacteria in a Hydrocarbon-Contaminated Sulfidic Aquifer.

Keller AH, Schleinitz KM, Starke R, Bertilsson S, Vogt C, Kleinsteuber S.

Front Microbiol. 2015 Dec 10;6:1396. doi: 10.3389/fmicb.2015.01396. eCollection 2015.

46.

Microbial metagenomes from three aquifers in the Fennoscandian shield terrestrial deep biosphere reveal metabolic partitioning among populations.

Wu X, Holmfeldt K, Hubalek V, Lundin D, Åström M, Bertilsson S, Dopson M.

ISME J. 2016 May;10(5):1192-203. doi: 10.1038/ismej.2015.185. Epub 2015 Oct 20.

47.

Acute Pancreatitis and Use of Pancreatitis-Associated Drugs: A 10-Year Population-Based Cohort Study.

Bertilsson S, Kalaitzakis E.

Pancreas. 2015 Oct;44(7):1096-104. doi: 10.1097/MPA.0000000000000406.

PMID:
26335010
48.

Metagenomic insights into strategies of aerobic and anaerobic carbon and nitrogen transformation in boreal lakes.

Peura S, Sinclair L, Bertilsson S, Eiler A.

Sci Rep. 2015 Jul 10;5:12102. doi: 10.1038/srep12102.

49.

Bacterial infections in alcoholic and nonalcoholic liver cirrhosis.

Sargenti K, Prytz H, Nilsson E, Bertilsson S, Kalaitzakis E.

Eur J Gastroenterol Hepatol. 2015 Sep;27(9):1080-6. doi: 10.1097/MEG.0000000000000396.

PMID:
26011234
50.

Factors That Affect Disease Progression After First Attack of Acute Pancreatitis.

Bertilsson S, Swärd P, Kalaitzakis E.

Clin Gastroenterol Hepatol. 2015 Sep;13(9):1662-9.e3. doi: 10.1016/j.cgh.2015.04.012. Epub 2015 Apr 22. Erratum in: Clin Gastroenterol Hepatol. 2017 Apr;15(4):608.

PMID:
25911118

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