Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 38

1.

Complete Genome Sequence of Escherichia coli BE104, an MC4100 Derivative Lacking the Methionine Reductive Pathway.

Anton BP, Morgan RD, Ezraty B, Manta B, Barras F, Berkmen M.

Microbiol Resour Announc. 2019 Jul 11;8(28). pii: e00721-19. doi: 10.1128/MRA.00721-19.

2.

Disulfide Bond Formation in the Periplasm of Escherichia coli.

Manta B, Boyd D, Berkmen M.

EcoSal Plus. 2019 Feb;8(2). doi: 10.1128/ecosalplus.ESP-0012-2018. Review.

PMID:
30761987
3.

Fusion to Tetrahymena thermophila granule lattice protein 1 confers solubility to sexual stage malaria antigens in Escherichia coli.

Agrawal A, Bisharyan Y, Papoyan A, Bednenko J, Cardarelli J, Yao M, Clark T, Berkmen M, Ke N, Colussi P.

Protein Expr Purif. 2019 Jan;153:7-17. doi: 10.1016/j.pep.2018.08.001. Epub 2018 Aug 3.

4.

Platform development for expression and purification of stable isotope labeled monoclonal antibodies in Escherichia coli.

Reddy PT, Brinson RG, Hoopes JT, McClung C, Ke N, Kashi L, Berkmen M, Kelman Z.

MAbs. 2018 Oct;10(7):992-1002. doi: 10.1080/19420862.2018.1496879. Epub 2018 Jul 30.

5.

Biochemical Characterization of Two Clinically-Relevant Human Fumarase Variants Defective for Oligomerization.

Bulku A, Weaver TM, Berkmen MB.

Open Biochem J. 2018 Jan 29;12:1-15. doi: 10.2174/1874091X01812010001. eCollection 2018. Review.

6.

Aeropyrum pernix membrane topology of protein VKOR promotes protein disulfide bond formation in two subcellular compartments.

Hibender S, Landeta C, Berkmen M, Beckwith J, Boyd D.

Microbiology. 2017 Dec;163(12):1864-1879. doi: 10.1099/mic.0.000569. Epub 2017 Nov 15.

7.

Visualizing Bacterial Colony Morphologies Using Time-Lapse Imaging Chamber MOCHA.

Peñil Cobo M, Libro S, Marechal N, D'Entremont D, Peñil Cobo D, Berkmen M.

J Bacteriol. 2017 Dec 20;200(2). pii: e00413-17. doi: 10.1128/JB.00413-17. Print 2018 Jan 15.

8.

A water-soluble DsbB variant that catalyzes disulfide-bond formation in vivo.

Mizrachi D, Robinson MP, Ren G, Ke N, Berkmen M, DeLisa MP.

Nat Chem Biol. 2017 Sep;13(9):1022-1028. doi: 10.1038/nchembio.2409. Epub 2017 Jun 19.

9.

Use of the SHuffle Strains in Production of Proteins.

Ren G, Ke N, Berkmen M.

Curr Protoc Protein Sci. 2016 Aug 1;85:5.26.1-5.26.21. doi: 10.1002/cpps.11.

PMID:
27479507
10.

Erratum to: SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasm.

Lobstein J, Emrich CA, Jeans C, Faulkner M, Riggs P, Berkmen M.

Microb Cell Fact. 2016 Jul 13;15(1):124. No abstract available.

11.

Biology of ICEBs1, an integrative and conjugative element in Bacillus subtilis.

Auchtung JM, Aleksanyan N, Bulku A, Berkmen MB.

Plasmid. 2016 Jul;86:14-25. doi: 10.1016/j.plasmid.2016.07.001. Epub 2016 Jul 2. Review.

PMID:
27381852
12.

Complete Genome Sequence of the Engineered Escherichia coli SHuffle Strains and Their Wild-Type Parents.

Anton BP, Fomenkov A, Raleigh EA, Berkmen M.

Genome Announc. 2016 Mar 31;4(2). pii: e00230-16. doi: 10.1128/genomeA.00230-16.

13.

Visualization of Periplasmic and Cytoplasmic Proteins with a Self-Labeling Protein Tag.

Ke N, Landgraf D, Paulsson J, Berkmen M.

J Bacteriol. 2016 Jan 19;198(7):1035-43. doi: 10.1128/JB.00864-15.

14.

Efficient expression of full-length antibodies in the cytoplasm of engineered bacteria.

Robinson MP, Ke N, Lobstein J, Peterson C, Szkodny A, Mansell TJ, Tuckey C, Riggs PD, Colussi PA, Noren CJ, Taron CH, DeLisa MP, Berkmen M.

Nat Commun. 2015 Aug 27;6:8072. doi: 10.1038/ncomms9072.

15.

Converting a Sulfenic Acid Reductase into a Disulfide Bond Isomerase.

Chatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M.

Antioxid Redox Signal. 2015 Oct 20;23(12):945-57. doi: 10.1089/ars.2014.6235. Epub 2015 Jul 20.

16.

Critical Components of the Conjugation Machinery of the Integrative and Conjugative Element ICEBs1 of Bacillus subtilis.

Leonetti CT, Hamada MA, Laurer SJ, Broulidakis MP, Swerdlow KJ, Lee CA, Grossman AD, Berkmen MB.

J Bacteriol. 2015 Aug 1;197(15):2558-67. doi: 10.1128/JB.00142-15. Epub 2015 May 26.

17.

An inquiry-based laboratory module to promote understanding of the scientific method and bacterial conjugation.

Berkmen MB, Murthy AC, Broulidakis MP.

J Microbiol Biol Educ. 2014 Dec 15;15(2):321-2. doi: 10.1128/jmbe.v15i2.763. eCollection 2014 Dec. No abstract available.

18.

Production of Disulfide-Bonded Proteins in Escherichia coli.

Ke N, Berkmen M.

Curr Protoc Mol Biol. 2014 Oct 1;108:16.1B.1-21. doi: 10.1002/0471142727.mb1601bs108. Review.

PMID:
25271713
19.

SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasm.

Lobstein J, Emrich CA, Jeans C, Faulkner M, Riggs P, Berkmen M.

Microb Cell Fact. 2012 May 8;11:56. doi: 10.1186/1475-2859-11-56. Erratum in: Microb Cell Fact. 2016;15(1):124.

20.

Cytoplasmic pH response to acid stress in individual cells of Escherichia coli and Bacillus subtilis observed by fluorescence ratio imaging microscopy.

Martinez KA 2nd, Kitko RD, Mershon JP, Adcox HE, Malek KA, Berkmen MB, Slonczewski JL.

Appl Environ Microbiol. 2012 May;78(10):3706-14. doi: 10.1128/AEM.00354-12. Epub 2012 Mar 16.

21.

Production of disulfide-bonded proteins in Escherichia coli.

Berkmen M.

Protein Expr Purif. 2012 Mar;82(1):240-51. doi: 10.1016/j.pep.2011.10.009. Epub 2011 Nov 7. Review.

22.

TrbB from conjugative plasmid F is a structurally distinct disulfide isomerase that requires DsbD for redox state maintenance.

Hemmis CW, Berkmen M, Eser M, Schildbach JF.

J Bacteriol. 2011 Sep;193(18):4588-97. doi: 10.1128/JB.00351-11. Epub 2011 Jul 8.

23.

Efficient gene transfer in bacterial cell chains.

Babic A, Berkmen MB, Lee CA, Grossman AD.

MBio. 2011 Mar 15;2(2). pii: e00027-11. doi: 10.1128/mBio.00027-11. Print 2011.

24.

Cytoplasmic acidification and the benzoate transcriptome in Bacillus subtilis.

Kitko RD, Cleeton RL, Armentrout EI, Lee GE, Noguchi K, Berkmen MB, Jones BD, Slonczewski JL.

PLoS One. 2009 Dec 14;4(12):e8255. doi: 10.1371/journal.pone.0008255.

25.

In vivo oxidative protein folding can be facilitated by oxidation-reduction cycling.

Shouldice SR, Cho SH, Boyd D, Heras B, Eser M, Beckwith J, Riggs P, Martin JL, Berkmen M.

Mol Microbiol. 2010 Jan;75(1):13-28. doi: 10.1111/j.1365-2958.2009.06952.x. Epub 2009 Dec 3.

26.

Polar positioning of a conjugation protein from the integrative and conjugative element ICEBs1 of Bacillus subtilis.

Berkmen MB, Lee CA, Loveday EK, Grossman AD.

J Bacteriol. 2010 Jan;192(1):38-45. doi: 10.1128/JB.00860-09.

27.

Bacterial species exhibit diversity in their mechanisms and capacity for protein disulfide bond formation.

Dutton RJ, Boyd D, Berkmen M, Beckwith J.

Proc Natl Acad Sci U S A. 2008 Aug 19;105(33):11933-8. doi: 10.1073/pnas.0804621105. Epub 2008 Aug 11.

28.

Still looking for the magic spot: the crystallographically defined binding site for ppGpp on RNA polymerase is unlikely to be responsible for rRNA transcription regulation.

Vrentas CE, Gaal T, Berkmen MB, Rutherford ST, Haugen SP, Vassylyev DG, Ross W, Gourse RL.

J Mol Biol. 2008 Mar 21;377(2):551-64. doi: 10.1016/j.jmb.2008.01.042. Epub 2008 Jan 26. Erratum in: J Mol Biol. 2008 Jun 20;379(5):1130.

29.

Genome-wide coorientation of replication and transcription reduces adverse effects on replication in Bacillus subtilis.

Wang JD, Berkmen MB, Grossman AD.

Proc Natl Acad Sci U S A. 2007 Mar 27;104(13):5608-13. Epub 2007 Mar 19.

31.

Spatial and temporal organization of the Bacillus subtilis replication cycle.

Berkmen MB, Grossman AD.

Mol Microbiol. 2006 Oct;62(1):57-71. Epub 2006 Aug 30.

32.

rRNA promoter regulation by nonoptimal binding of sigma region 1.2: an additional recognition element for RNA polymerase.

Haugen SP, Berkmen MB, Ross W, Gaal T, Ward C, Gourse RL.

Cell. 2006 Jun 16;125(6):1069-82.

33.

DksA potentiates direct activation of amino acid promoters by ppGpp.

Paul BJ, Berkmen MB, Gourse RL.

Proc Natl Acad Sci U S A. 2005 May 31;102(22):7823-8. Epub 2005 May 17.

34.

The nonconsecutive disulfide bond of Escherichia coli phytase (AppA) renders it dependent on the protein-disulfide isomerase, DsbC.

Berkmen M, Boyd D, Beckwith J.

J Biol Chem. 2005 Mar 25;280(12):11387-94. Epub 2005 Jan 10.

35.
36.

Multi-copy repression of Serratia marcescens nuclease expression by dinI.

Berkmen M, Benedik MJ.

Curr Microbiol. 2002 Jan;44(1):44-8.

PMID:
11727040
37.

RNase E, the major player in mRNA degradation, is down-regulated in Escherichia coli during a transient growth retardation (diauxic lag).

Barlow T, Berkmen M, Georgellis D, Bayr L, Arvidson S, von Gabain A.

Biol Chem. 1998 Jan;379(1):33-8.

PMID:
9504714
38.

The Serratia marcescens NucE protein functions as a holin in Escherichia coli.

Berkmen M, Benedik MJ, Bläsi U.

J Bacteriol. 1997 Oct;179(20):6522-4.

Supplemental Content

Loading ...
Support Center