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A Long-Living Bioengineered Neural Tissue Platform to Study Neurodegeneration.

Rouleau N, Cantley WL, Liaudanskaya V, Berk A, Du C, Rusk W, Peirent E, Koester C, Nieland TJF, Kaplan DL.

Macromol Biosci. 2020 Feb 17:e2000004. doi: 10.1002/mabi.202000004. [Epub ahead of print]


Antidepressant effect of Gentiana olivieri Griseb. in male rats exposed to chronic mild stress.

Berk A, Yılmaz İ, Abacıoğlu N, Kaymaz MB, Karaaslan MG, Kuyumcu Savan E.

Libyan J Med. 2020 Dec;15(1):1725991. doi: 10.1080/19932820.2020.1725991.


Protocol of a randomized open label multicentre trial comparing continuous intrajejunal levodopa infusion with deep brain stimulation in Parkinson's disease - the INfusion VErsus STimulation (INVEST) study.

van Poppelen D, Sisodia V, de Haan RJ, Dijkgraaf MGW, Schuurman PR, Geurtsen GJ, Berk AEM, de Bie RMA, Dijk JM.

BMC Neurol. 2020 Jan 31;20(1):40. doi: 10.1186/s12883-020-1621-y.


Detoxifying deoxynivalenol (DON)-contaminated feedstuff: consequences of sodium sulphite (SoS) treatment on performance and blood parameters in fattening pigs.

Bahrenthien L, Kluess J, Berk A, Kersten S, Saltzmann J, Hüther L, Schatzmayr D, Schwartz-Zimmermann HE, Zeyner A, Dänicke S.

Mycotoxin Res. 2020 Jan 20. doi: 10.1007/s12550-019-00385-5. [Epub ahead of print]


Use of interventional bronchoscopic treatment in small cell lung cancer.

Ozdemir C, Sökücü SN, Berk A, Dalar L.

Indian J Cancer. 2019 Jul-Sep;56(3):236-240. doi: 10.4103/ijc.IJC_45_18.


Dedifferentiation by adenovirus E1A due to inactivation of Hippo pathway effectors YAP and TAZ.

Zemke NR, Gou D, Berk AJ.

Genes Dev. 2019 Jul 1;33(13-14):828-843. doi: 10.1101/gad.324814.119. Epub 2019 Jun 6.


Effects of Feed Particle Size and Hydro-Thermal Processing Methods on Starch Modification, Nutrient Digestibility and the Performance and the Gastrointestinal Tract of Broilers.

Liermann W, Bochnia M, Berk A, Böschen V, Hüther L, Zeyner A, Dänicke S.

Animals (Basel). 2019 May 30;9(6). pii: E294. doi: 10.3390/ani9060294.


Cereblon Control of Zebrafish Brain Size by Regulation of Neural Stem Cell Proliferation.

Ando H, Sato T, Ito T, Yamamoto J, Sakamoto S, Nitta N, Asatsuma-Okumura T, Shimizu N, Mizushima R, Aoki I, Imai T, Yamaguchi Y, Berk AJ, Handa H.

iScience. 2019 May 31;15:95-108. doi: 10.1016/j.isci.2019.04.007. Epub 2019 Apr 9.


Fine grinding or expanding of feed as pre-treatment for pelleting in dependence on dietary rapeseed expeller proportion: Nutritional consequences for broilers.

Liermann W, Berk A, Hüther L, Böschen V, Dänicke S.

Arch Anim Nutr. 2019 Jun;73(3):239-254. doi: 10.1080/1745039X.2019.1591910. Epub 2019 Apr 29.


Engineering advanced neural tissue constructs to mitigate acute cerebral inflammation after brain transplantation in rats.

Liaudanskaya V, Jgamadze D, Berk AN, Bischoff DJ, Gu BJ, Hawks-Mayer H, Whalen MJ, Chen HI, Kaplan DL.

Biomaterials. 2019 Feb;192:510-522. doi: 10.1016/j.biomaterials.2018.11.031. Epub 2018 Nov 26.


Effects of a Fusarium Toxin-Contaminated Maize Treated with Sodium Sulfite on Male Piglets in the Presence of an LPS-Induced Acute Inflammation.

Tran AT, Kluess J, Berk A, Paulick M, Frahm J, Schatzmayr D, Kersten S, Dänicke S.

Toxins (Basel). 2018 Oct 18;10(10). pii: E419. doi: 10.3390/toxins10100419.


Adenovirus E1A Activation Domain Regulates H3 Acetylation Affecting Varied Steps in Transcription at Different Viral Promoters.

Hsu E, Pennella MA, Zemke NR, Eng C, Berk AJ.

J Virol. 2018 Aug 29;92(18). pii: e00805-18. doi: 10.1128/JVI.00805-18. Print 2018 Sep 15.


Detoxification of Fusarium-contaminated maize with sodium sulphite - in vivo efficacy with special emphasis on mycotoxin residues and piglet health.

Tran AT, Kluess J, Berk A, Paulick M, Frahm J, Schatzmayr D, Winkler J, Kersten S, Dänicke S.

Arch Anim Nutr. 2018 Feb;72(1):58-75. doi: 10.1080/1745039X.2017.1418047.


The Adenovirus E1A C Terminus Suppresses a Delayed Antiviral Response and Modulates RAS Signaling.

Zemke NR, Berk AJ.

Cell Host Microbe. 2017 Dec 13;22(6):789-800.e5. doi: 10.1016/j.chom.2017.11.008.


Moderating Nutritious Habits in Psychiatric Patients Using Transtheoretical Model of Change and Counseling.

Anastopoulou K, Fradelos EC, Misouridou E, Kourakos M, Berk A, Papathanasiou IV, Kleisiaris C, Zyga S.

Adv Exp Med Biol. 2017;988:63-71. doi: 10.1007/978-3-319-56246-9_5.


Evaluation of maternal attachment, self-efficacy, levels of depression, and anxiety in mothers who have babies diagnosed with retinopathy of prematurity.

Özyurt G, Özyurt A, Ozturk T, Yaman A, Berk AT.

Ophthalmic Epidemiol. 2018 Apr;25(2):140-146. doi: 10.1080/09286586.2017.1372487. Epub 2017 Sep 25.


Long-term evaluation of refractive changes in eyes of preterm children: a 6-year follow-up study.

Kaya M, Berk AT, Yaman A.

Int Ophthalmol. 2018 Aug;38(4):1681-1688. doi: 10.1007/s10792-017-0642-z. Epub 2017 Jul 1.


A randomised, active- and placebo-controlled, three-period crossover trial to investigate short-term effects of the dipeptidyl peptidase-4 inhibitor linagliptin on macro- and microvascular endothelial function in type 2 diabetes.

Jax T, Stirban A, Terjung A, Esmaeili H, Berk A, Thiemann S, Chilton R, von Eynatten M, Marx N.

Cardiovasc Diabetol. 2017 Jan 21;16(1):13. doi: 10.1186/s12933-016-0493-3.


Comparison of calculated and experimentally determined SID of CP and AA in complex diets differing in AA contents for grower finisher pigs.

Büsing K, Berk A, Müller S, Kieckhäven S, Krüger K, Zeyner A.

J Anim Physiol Anim Nutr (Berl). 2017 Oct;101(5):e297-e302. doi: 10.1111/jpn.12605. Epub 2017 Jan 4.


Deoxynivalenol (DON) Contamination of Feed and Grinding Fineness: Are There Interactive Implications on Stomach Integrity and Health of Piglets?

Dänicke S, Beineke A, Berk A, Kersten S.

Toxins (Basel). 2017 Jan 1;9(1). pii: E16. doi: 10.3390/toxins9010016.


Effects of two commercial diets and technical feed treatment on stomach lesions and immune system of fattening pigs.

Liermann W, Berk A, Frahm J, Böschen V, Dänicke S.

J Anim Physiol Anim Nutr (Berl). 2017 Oct;101(5):e414-e426. doi: 10.1111/jpn.12623. Epub 2016 Nov 2.


Primary and Secondary Intraocular Lens Implantations in Children With Pediatric Cataract: Visual Acuity and Strabismus at the Age of 2 Years and Older.

Sefi-Yurdakul N, Berk AT.

J Pediatr Ophthalmol Strabismus. 2017 Mar 1;54(2):97-102. doi: 10.3928/01913913-20160926-01. Epub 2016 Oct 26.


Treatment of painful bone metastases in prostate and breast cancer patients with the therapeutic radiopharmaceutical rhenium-188-HEDP. Clinical benefit in a real-world study.

Lange R, Overbeek F, de Klerk JM, Pasker-de Jong PC, van den Berk AM, Ter Heine R, Rodenburg CJ, Kooistra A, Hendrikse NH, Bloemendal HJ.

Nuklearmedizin. 2016 Sep 26;55(5):188-95. doi: 10.3413/Nukmed-0828-16-05. Epub 2016 Jul 22.


Histological and Immunohistochemical Retinal Changes Following the Intravitreal Injection of Aflibercept, Bevacizumab and Ranibizumab in Newborn Rabbits.

Cam D, Berk AT, Micili SC, Kume T, Ergur BU, Yilmaz O.

Curr Eye Res. 2017 Feb;42(2):315-322. doi: 10.3109/02713683.2016.1164190. Epub 2016 Jun 17.


Effects of diets differing in protein source and technical treatment on digestibility, performance and visceral and biochemical parameters of fattening pigs.

Liermann W, Berk A, Böschen V, Dänicke S.

Arch Anim Nutr. 2016;70(3):190-208. doi: 10.1080/1745039X.2016.1157983.


The Effect of Intravitreal Azithromycin on the Albino Newborn Rabbit Retina.

Cam D, Saatci AO, Micili SC, Ergur BU, Karabag RY, Durak I, Berk AT.

Open Ophthalmol J. 2016 Feb 4;10:12-6. doi: 10.2174/1874364101610010012. eCollection 2016.


Discovery of RNA splicing and genes in pieces.

Berk AJ.

Proc Natl Acad Sci U S A. 2016 Jan 26;113(4):801-5. doi: 10.1073/pnas.1525084113. Epub 2016 Jan 19. No abstract available.


Effects of particle size and hydro-thermal treatment of feed on performance and stomach health in fattening pigs.

Liermann W, Berk A, Böschen V, Dänicke S.

Arch Anim Nutr. 2015;69(6):455-72. doi: 10.1080/1745039X.2015.1087748. Epub 2015 Oct 1.


Changing trends over the last decade in the aetiology of childhood blindness: a study from a tertiary referral centre.

Ozturk T, Er D, Yaman A, Berk AT.

Br J Ophthalmol. 2016 Feb;100(2):166-71. doi: 10.1136/bjophthalmol-2015-306737. Epub 2015 Jul 9.


Adenovirus small E1A employs the lysine acetylases p300/CBP and tumor suppressor Rb to repress select host genes and promote productive virus infection.

Ferrari R, Gou D, Jawdekar G, Johnson SA, Nava M, Su T, Yousef AF, Zemke NR, Pellegrini M, Kurdistani SK, Berk AJ.

Cell Host Microbe. 2014 Nov 12;16(5):663-76. doi: 10.1016/j.chom.2014.10.004. Epub 2014 Nov 12.


Influence of dietary amino acid level on chemical body composition and performance of growing-finishing boars of two sire lines.

Otten C, Berk A, Müller S, Weber M, Dänicke S.

Arch Anim Nutr. 2013 Dec;67(6):477-91. doi: 10.1080/1745039X.2013.858896.


Effects of oregano on performance and immunmodulating factors in weaned piglets.

Stelter K, Frahm J, Paulsen J, Berk A, Kleinwächter M, Selmar D, Dänicke S.

Arch Anim Nutr. 2013 Dec;67(6):461-76. doi: 10.1080/1745039X.2013.858897.


Long-term safety and efficacy of empagliflozin, sitagliptin, and metformin: an active-controlled, parallel-group, randomized, 78-week open-label extension study in patients with type 2 diabetes.

Ferrannini E, Berk A, Hantel S, Pinnetti S, Hach T, Woerle HJ, Broedl UC.

Diabetes Care. 2013 Dec;36(12):4015-21. doi: 10.2337/dc13-0663. Epub 2013 Nov 1.


Prolonged capnoperitoneum does not cause postoperative ileus in pigs: safety of prolonged capnoperitoneum.

Borchert D, Köhler P, Jäger T, Diederich M, Hüther L, Berk A, Lamade W.

Minim Invasive Ther Allied Technol. 2014 Jun;23(3):157-64. doi: 10.3109/13645706.2013.855234. Epub 2013 Oct 31.


Enrichment map profiling of the cancer invasion front suggests regulation of colorectal cancer progression by the bone morphogenetic protein antagonist, gremlin-1.

Karagiannis GS, Berk A, Dimitromanolakis A, Diamandis EP.

Mol Oncol. 2013 Aug;7(4):826-39. doi: 10.1016/j.molonc.2013.04.002. Epub 2013 Apr 18.


Ocular disorders in children with spastic subtype of cerebral palsy.

Ozturk AT, Berk AT, Yaman A.

Int J Ophthalmol. 2013 Apr 18;6(2):204-10. doi: 10.3980/j.issn.2222-3959.2013.02.19. Print 2013.


A rapid Q-PCR titration protocol for adenovirus and helper-dependent adenovirus vectors that produces biologically relevant results.

Gallaher SD, Berk AJ.

J Virol Methods. 2013 Sep;192(1-2):28-38. doi: 10.1016/j.jviromet.2013.04.013. Epub 2013 Apr 26.


Out-of-register β-sheets suggest a pathway to toxic amyloid aggregates.

Liu C, Zhao M, Jiang L, Cheng PN, Park J, Sawaya MR, Pensalfini A, Gou D, Berk AJ, Glabe CG, Nowick J, Eisenberg D.

Proc Natl Acad Sci U S A. 2012 Dec 18;109(51):20913-8. doi: 10.1073/pnas.1218792109. Epub 2012 Dec 3.


Yin and yang of mediator function revealed by human mutants.

Berk AJ.

Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19519-20. doi: 10.1073/pnas.1217267109. Epub 2012 Nov 26. No abstract available.


Associations of VEGF/VEGF-receptor and HGF/c-Met promoter polymorphisms with progression/regression of retinopathy of prematurity.

Kaya M, Çokakli M, Berk AT, Yaman A, Yesilirmak D, Kumral A, Atabey N.

Curr Eye Res. 2013 Jan;38(1):137-42. doi: 10.3109/02713683.2012.731550. Epub 2012 Oct 24.


Development and preliminary evaluation of a training workshop for the collection of patient-reported outcome (PRO) interview data by research support staff.

Atkinson TM, Hurley K, Bylund CL, Berk A, Diminni K, Ostroff JS.

J Cancer Educ. 2013 Mar;28(1):33-7. doi: 10.1007/s13187-012-0427-z.


At the intersection of HIV/AIDS and cancer: a qualitative needs assessment of community-based HIV/AIDS service organizations.

Burkhalter JE, Cahill S, Shuk E, Guidry J, Corner G, Berk A, Candelario N, Kornegay M, Lubetkin EI.

Health Educ Behav. 2013 Aug;40(4):493-503. doi: 10.1177/1090198112459049. Epub 2012 Oct 4.


Reorganization of the host epigenome by a viral oncogene.

Ferrari R, Su T, Li B, Bonora G, Oberai A, Chan Y, Sasidharan R, Berk AJ, Pellegrini M, Kurdistani SK.

Genome Res. 2012 Jul;22(7):1212-21. doi: 10.1101/gr.132308.111. Epub 2012 Apr 12.


Microdebrider assisted endoscopic marsupialization of congenital intranasal nasolacrimal duct cysts.

Dogan E, Yüksel NG, Ecevit MC, Yaman A, Berk AT, Sütay S.

Int J Pediatr Otorhinolaryngol. 2012 Apr;76(4):488-91. doi: 10.1016/j.ijporl.2011.12.031. Epub 2012 Jan 23.


In vitro reconstitution of SV40 particles that are composed of VP1/2/3 capsid proteins and nucleosomal DNA and direct efficient gene transfer.

Enomoto T, Kukimoto I, Kawano MA, Yamaguchi Y, Berk AJ, Handa H.

Virology. 2011 Nov 10;420(1):1-9. doi: 10.1016/j.virol.2011.08.014. Epub 2011 Sep 13.


Severe hypothermia in a patient with spinal cord injury without radiological abnormality.

Smith TM, Berk AS, Upadhyay H.

J Emerg Trauma Shock. 2011 Jul;4(3):421-4. doi: 10.4103/0974-2700.83878.


Dominant-negative mechanism of leukemogenic PAX5 fusions.

Kawamata N, Pennella MA, Woo JL, Berk AJ, Koeffler HP.

Oncogene. 2012 Feb 23;31(8):966-77. doi: 10.1038/onc.2011.291. Epub 2011 Jul 18.


Improving communication of diagnostic radiology findings through structured reporting.

Schwartz LH, Panicek DM, Berk AR, Li Y, Hricak H.

Radiology. 2011 Jul;260(1):174-81. doi: 10.1148/radiol.11101913. Epub 2011 Apr 25.


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