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Cell-type-specific transcriptome and histone modification dynamics during cellular reprogramming in the Arabidopsis stomatal lineage.

Lee LR, Wengier DL, Bergmann DC.

Proc Natl Acad Sci U S A. 2019 Oct 8. pii: 201911400. doi: 10.1073/pnas.1911400116. [Epub ahead of print]


Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID.

Mair A, Xu SL, Branon TC, Ting AY, Bergmann DC.

Elife. 2019 Sep 19;8. pii: e47864. doi: 10.7554/eLife.47864.


The plant stomatal lineage at a glance.

Lee LR, Bergmann DC.

J Cell Sci. 2019 Apr 26;132(8). pii: jcs228551. doi: 10.1242/jcs.228551. Review.


SOL1 and SOL2 regulate fate transition and cell divisions in the Arabidopsis stomatal lineage.

Simmons AR, Davies KA, Wang W, Liu Z, Bergmann DC.

Development. 2019 Feb 4;146(3). pii: dev171066. doi: 10.1242/dev.171066.


Taking Development to Three Dimensions.

Bergmann DC.

Dev Cell. 2018 Dec 17;47(6):678-679. doi: 10.1016/j.devcel.2018.11.043.


Modulation of Asymmetric Division Diversity through Cytokinin and SPEECHLESS Regulatory Interactions in the Arabidopsis Stomatal Lineage.

Vatén A, Soyars CL, Tarr PT, Nimchuk ZL, Bergmann DC.

Dev Cell. 2018 Oct 8;47(1):53-66.e5. doi: 10.1016/j.devcel.2018.08.007. Epub 2018 Sep 6.


Grass stomata.

McKown KH, Bergmann DC.

Curr Biol. 2018 Aug 6;28(15):R814-R816. doi: 10.1016/j.cub.2018.05.074.


Conservation and divergence of YODA MAPKKK function in regulation of grass epidermal patterning.

Abrash E, Anleu Gil MX, Matos JL, Bergmann DC.

Development. 2018 Jul 17;145(14). pii: dev165860. doi: 10.1242/dev.165860.


Dissection of MAPK signaling specificity through protein engineering in a developmental context.

Wengier DL, Lampard GR, Bergmann DC.

BMC Plant Biol. 2018 Apr 10;18(1):60. doi: 10.1186/s12870-018-1274-9.


Direct Control of SPEECHLESS by PIF4 in the High-Temperature Response of Stomatal Development.

Lau OS, Song Z, Zhou Z, Davies KA, Chang J, Yang X, Wang S, Lucyshyn D, Tay IHZ, Wigge PA, Bergmann DC.

Curr Biol. 2018 Apr 23;28(8):1273-1280.e3. doi: 10.1016/j.cub.2018.02.054. Epub 2018 Apr 5.


Lineage- and stage-specific expressed CYCD7;1 coordinates the single symmetric division that creates stomatal guard cells.

Weimer AK, Matos JL, Sharma N, Patell F, Murray JAH, Dewitte W, Bergmann DC.

Development. 2018 Mar 21;145(6). pii: dev160671. doi: 10.1242/dev.160671.


Mobile MUTE specifies subsidiary cells to build physiologically improved grass stomata.

Raissig MT, Matos JL, Anleu Gil MX, Kornfeld A, Bettadapur A, Abrash E, Allison HR, Badgley G, Vogel JP, Berry JA, Bergmann DC.

Science. 2017 Mar 17;355(6330):1215-1218. doi: 10.1126/science.aal3254. Epub 2017 Mar 16. Erratum in: Science. 2017 Apr 7;356(6333):. Gil ,MX [corrrected to Anleu Gil , MX].


Tissue-wide Mechanical Forces Influence the Polarity of Stomatal Stem Cells in Arabidopsis.

Bringmann M, Bergmann DC.

Curr Biol. 2017 Mar 20;27(6):877-883. doi: 10.1016/j.cub.2017.01.059. Epub 2017 Mar 9.


Origin and function of stomata in the moss Physcomitrella patens.

Chater CC, Caine RS, Tomek M, Wallace S, Kamisugi Y, Cuming AC, Lang D, MacAlister CA, Casson S, Bergmann DC, Decker EL, Frank W, Gray JE, Fleming A, Reski R, Beerling DJ.

Nat Plants. 2016 Nov 28;2:16179. doi: 10.1038/nplants.2016.179.


Modulators of Stomatal Lineage Signal Transduction Alter Membrane Contact Sites and Reveal Specialization among ERECTA Kinases.

Ho CM, Paciorek T, Abrash E, Bergmann DC.

Dev Cell. 2016 Aug 22;38(4):345-57. doi: 10.1016/j.devcel.2016.07.016.


Fine-scale dissection of the subdomains of polarity protein BASL in stomatal asymmetric cell division.

Zhang Y, Bergmann DC, Dong J.

J Exp Bot. 2016 Sep;67(17):5093-103. doi: 10.1093/jxb/erw274. Epub 2016 Jul 15.


Grasses use an alternatively wired bHLH transcription factor network to establish stomatal identity.

Raissig MT, Abrash E, Bettadapur A, Vogel JP, Bergmann DC.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8326-31. doi: 10.1073/pnas.1606728113. Epub 2016 Jul 5.


Arabidopsis CSLD5 Functions in Cell Plate Formation in a Cell Cycle-Dependent Manner.

Gu F, Bringmann M, Combs JR, Yang J, Bergmann DC, Nielsen E.

Plant Cell. 2016 Jul;28(7):1722-37. doi: 10.1105/tpc.16.00203. Epub 2016 Jun 27.


Transcriptional control of cell fate in the stomatal lineage.

Simmons AR, Bergmann DC.

Curr Opin Plant Biol. 2016 Feb;29:1-8. doi: 10.1016/j.pbi.2015.09.008. Epub 2015 Nov 7. Review.


MOBE-ChIP: a large-scale chromatin immunoprecipitation assay for cell type-specific studies.

Lau OS, Bergmann DC.

Plant J. 2015 Oct;84(2):443-50. doi: 10.1111/tpj.13010.


Transcriptome dynamics of the stomatal lineage: birth, amplification, and termination of a self-renewing population.

Adrian J, Chang J, Ballenger CE, Bargmann BO, Alassimone J, Davies KA, Lau OS, Matos JL, Hachez C, Lanctot A, Vatén A, Birnbaum KD, Bergmann DC.

Dev Cell. 2015 Apr 6;33(1):107-18. doi: 10.1016/j.devcel.2015.01.025.


Arabidopsis reduces growth under osmotic stress by decreasing SPEECHLESS protein.

Kumari A, Jewaria PK, Bergmann DC, Kakimoto T.

Plant Cell Physiol. 2014 Dec;55(12):2037-46. doi: 10.1093/pcp/pcu159. Epub 2014 Nov 6.


Functional specialization of stomatal bHLHs through modification of DNA-binding and phosphoregulation potential.

Davies KA, Bergmann DC.

Proc Natl Acad Sci U S A. 2014 Oct 28;111(43):15585-90. doi: 10.1073/pnas.1411766111. Epub 2014 Oct 10.


Irreversible fate commitment in the Arabidopsis stomatal lineage requires a FAMA and RETINOBLASTOMA-RELATED module.

Matos JL, Lau OS, Hachez C, Cruz-Ramírez A, Scheres B, Bergmann DC.

Elife. 2014 Oct 10;3. doi: 10.7554/eLife.03271.


Direct roles of SPEECHLESS in the specification of stomatal self-renewing cells.

Lau OS, Davies KA, Chang J, Adrian J, Rowe MH, Ballenger CE, Bergmann DC.

Science. 2014 Sep 26;345(6204):1605-9. doi: 10.1126/science.1256888. Epub 2014 Sep 4.


Convergence of stem cell behaviors and genetic regulation between animals and plants: insights from the Arabidopsis thaliana stomatal lineage.

Matos JL, Bergmann DC.

F1000Prime Rep. 2014 Jul 8;6:53. doi: 10.12703/P6-53. eCollection 2014. Review.


Coordinating cell polarity: heading in the right direction?

Axelrod JD, Bergmann DC.

Development. 2014 Sep;141(17):3298-302. doi: 10.1242/dev.111484.


Patterning and processes: how stomatal development defines physiological potential.

Dow GJ, Bergmann DC.

Curr Opin Plant Biol. 2014 Oct;21:67-74. doi: 10.1016/j.pbi.2014.06.007. Epub 2014 Jul 22. Review.


Omics and modelling approaches for understanding regulation of asymmetric cell divisions in arabidopsis and other angiosperm plants.

Kajala K, Ramakrishna P, Fisher A, Bergmann DC, De Smet I, Sozzani R, Weijers D, Brady SM.

Ann Bot. 2014 Jun;113(7):1083-1105. Review.


An integrated model of stomatal development and leaf physiology.

Dow GJ, Bergmann DC, Berry JA.

New Phytol. 2014 Mar;201(4):1218-26. doi: 10.1111/nph.12608. Epub 2013 Nov 19.


The physiological importance of developmental mechanisms that enforce proper stomatal spacing in Arabidopsis thaliana.

Dow GJ, Berry JA, Bergmann DC.

New Phytol. 2014 Mar;201(4):1205-17. doi: 10.1111/nph.12586. Epub 2013 Nov 11.


A map of cell type-specific auxin responses.

Bargmann BO, Vanneste S, Krouk G, Nawy T, Efroni I, Shani E, Choe G, Friml J, Bergmann DC, Estelle M, Birnbaum KD.

Mol Syst Biol. 2013;9:688. doi: 10.1038/msb.2013.40.


Correction: Mechanisms of stomatal development: an evolutionary view.

Vatén A, Bergmann DC.

Evodevo. 2013 Apr 4;4(1):11. doi: 10.1186/2041-9139-4-11. No abstract available.


On fate and flexibility in stomatal development.

Wengier DL, Bergmann DC.

Cold Spring Harb Symp Quant Biol. 2012;77:53-62. doi: 10.1101/sqb.2013.77.015883. Epub 2013 Feb 26. Review.


Mechanisms of stomatal development: an evolutionary view.

Vatén A, Bergmann DC.

Evodevo. 2012 Jul 6;3(1):11. doi: 10.1186/2041-9139-3-11.


Brassinosteroid regulates stomatal development by GSK3-mediated inhibition of a MAPK pathway.

Kim TW, Michniewicz M, Bergmann DC, Wang ZY.

Nature. 2012 Feb 5;482(7385):419-22. doi: 10.1038/nature10794.


Generation of signaling specificity in Arabidopsis by spatially restricted buffering of ligand-receptor interactions.

Abrash EB, Davies KA, Bergmann DC.

Plant Cell. 2011 Aug;23(8):2864-79. doi: 10.1105/tpc.111.086637. Epub 2011 Aug 23.


Peptide signaling in plant development.

Katsir L, Davies KA, Bergmann DC, Laux T.

Curr Biol. 2011 May 10;21(9):R356-64. doi: 10.1016/j.cub.2011.03.012. Review.


Sequence and function of basic helix-loop-helix proteins required for stomatal development in Arabidopsis are deeply conserved in land plants.

MacAlister CA, Bergmann DC.

Evol Dev. 2011 Mar-Apr;13(2):182-92. doi: 10.1111/j.1525-142X.2011.00468.x.


Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA.

Hachez C, Ohashi-Ito K, Dong J, Bergmann DC.

Plant Physiol. 2011 Mar;155(3):1458-72. doi: 10.1104/pp.110.167718. Epub 2011 Jan 18.


The secret to life is being different: asymmetric divisions in plant development.

Paciorek T, Bergmann DC.

Curr Opin Plant Biol. 2010 Dec;13(6):661-9. doi: 10.1016/j.pbi.2010.09.016. Epub 2010 Oct 20. Review.


Plant asymmetric cell division regulators: pinch-hitting for PARs?

Metzinger CA, Bergmann DC.

F1000 Biol Rep. 2010 Apr 12;2. pii: 25. doi: 10.3410/B2-25.


Stomatal patterning and development.

Dong J, Bergmann DC.

Curr Top Dev Biol. 2010;91:267-97. doi: 10.1016/S0070-2153(10)91009-0. Review.


Complex signals for simple cells: the expanding ranks of signals and receptors guiding stomatal development.

Rowe MH, Bergmann DC.

Curr Opin Plant Biol. 2010 Oct;13(5):548-55. doi: 10.1016/j.pbi.2010.06.002. Epub 2010 Jul 16. Review.


Regional specification of stomatal production by the putative ligand CHALLAH.

Abrash EB, Bergmann DC.

Development. 2010 Feb;137(3):447-55. doi: 10.1242/dev.040931. Epub 2010 Jan 7.


From molecule to model, from environment to evolution: an integrated view of growth and development.

Bergmann DC, Fleming AJ.

Curr Opin Plant Biol. 2010 Feb;13(1):1-4. doi: 10.1016/j.pbi.2009.12.001. Epub 2010 Jan 4. No abstract available.


Novel and expanded roles for MAPK signaling in Arabidopsis stomatal cell fate revealed by cell type-specific manipulations.

Lampard GR, Lukowitz W, Ellis BE, Bergmann DC.

Plant Cell. 2009 Nov;21(11):3506-17. doi: 10.1105/tpc.109.070110. Epub 2009 Nov 6.

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