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Items: 18


Aggregation of Nontuberculous Mycobacteria Is Regulated by Carbon-Nitrogen Balance.

DePas WH, Bergkessel M, Newman DK.

mBio. 2019 Aug 13;10(4). pii: e01715-19. doi: 10.1128/mBio.01715-19.


The dormancy-specific regulator, SutA, is intrinsically disordered and modulates transcription initiation in Pseudomonas aeruginosa.

Bergkessel M, Babin BM, VanderVelde D, Sweredoski MJ, Moradian A, Eggleston-Rangel R, Hess S, Tirrell DA, Artsimovitch I, Newman DK.

Mol Microbiol. 2019 Sep;112(3):992-1009. doi: 10.1111/mmi.14337. Epub 2019 Jul 10.


Erratum for Basta et al., "Identification of Fitness Determinants during Energy-Limited Growth Arrest in Pseudomonas aeruginosa".

Basta DW, Bergkessel M, Newman DK.

mBio. 2018 Apr 10;9(2). pii: e00576-18. doi: 10.1128/mBio.00576-18. No abstract available.


Identification of Fitness Determinants during Energy-Limited Growth Arrest in Pseudomonas aeruginosa.

Basta DW, Bergkessel M, Newman DK.

mBio. 2017 Nov 28;8(6). pii: e01170-17. doi: 10.1128/mBio.01170-17. Erratum in: MBio. 2018 Apr 10;9(2):.


The Evolutionarily-conserved Polyadenosine RNA Binding Protein, Nab2, Cooperates with Splicing Machinery to Regulate the Fate of pre-mRNA.

Soucek S, Zeng Y, Bellur DL, Bergkessel M, Morris KJ, Deng Q, Duong D, Seyfried NT, Guthrie C, Staley JP, Fasken MB, Corbett AH.

Mol Cell Biol. 2016 Nov;36(21):2697-2714. doi: 10.1128/MCB.00402-16. Epub 2016 Aug 15.


The physiology of growth arrest: uniting molecular and environmental microbiology.

Bergkessel M, Basta DW, Newman DK.

Nat Rev Microbiol. 2016 Aug 11;14(9):549-62. doi: 10.1038/nrmicro.2016.107. Review.


SutA is a bacterial transcription factor expressed during slow growth in Pseudomonas aeruginosa.

Babin BM, Bergkessel M, Sweredoski MJ, Moradian A, Hess S, Newman DK, Tirrell DA.

Proc Natl Acad Sci U S A. 2016 Feb 2;113(5):E597-605. doi: 10.1073/pnas.1514412113. Epub 2016 Jan 19.


Enzymatic Degradation of Phenazines Can Generate Energy and Protect Sensitive Organisms from Toxicity.

Costa KC, Bergkessel M, Saunders S, Korlach J, Newman DK.

mBio. 2015 Oct 27;6(6):e01520-15. doi: 10.1128/mBio.01520-15.


The upper respiratory tract as a microbial source for pulmonary infections in cystic fibrosis. Parallels from island biogeography.

Whiteson KL, Bailey B, Bergkessel M, Conrad D, Delhaes L, Felts B, Harris JK, Hunter R, Lim YW, Maughan H, Quinn R, Salamon P, Sullivan J, Wagner BD, Rainey PB.

Am J Respir Crit Care Med. 2014 Jun 1;189(11):1309-15. doi: 10.1164/rccm.201312-2129PP.


Yeast-gene replacement using PCR products.

Bergkessel M, Guthrie C, Abelson J.

Methods Enzymol. 2013;533:43-55. doi: 10.1016/B978-0-12-420067-8.00005-2.


Chemical transformation of yeast.

Bergkessel M, Guthrie C.

Methods Enzymol. 2013;529:311-20. doi: 10.1016/B978-0-12-418687-3.00026-4.


Colony PCR.

Bergkessel M, Guthrie C.

Methods Enzymol. 2013;529:299-309. doi: 10.1016/B978-0-12-418687-3.00025-2.


Diverse environmental stresses elicit distinct responses at the level of pre-mRNA processing in yeast.

Bergkessel M, Whitworth GB, Guthrie C.

RNA. 2011 Aug;17(8):1461-78. doi: 10.1261/rna.2754011. Epub 2011 Jun 22.


SnapShot: Formation of mRNPs.

Bergkessel M, Wilmes GM, Guthrie C.

Cell. 2009 Feb 20;136(4):794, 794.e1. doi: 10.1016/j.cell.2009.01.047. No abstract available.


A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing.

Wilmes GM, Bergkessel M, Bandyopadhyay S, Shales M, Braberg H, Cagney G, Collins SR, Whitworth GB, Kress TL, Weissman JS, Ideker T, Guthrie C, Krogan NJ.

Mol Cell. 2008 Dec 5;32(5):735-46. doi: 10.1016/j.molcel.2008.11.012.


Rapid, transcript-specific changes in splicing in response to environmental stress.

Pleiss JA, Whitworth GB, Bergkessel M, Guthrie C.

Mol Cell. 2007 Sep 21;27(6):928-37.


Transcript specificity in yeast pre-mRNA splicing revealed by mutations in core spliceosomal components.

Pleiss JA, Whitworth GB, Bergkessel M, Guthrie C.

PLoS Biol. 2007 Apr;5(4):e90.

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