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Items: 1 to 50 of 79

1.

Environmental extremes drive population structure at the northern range limit of Atlantic salmon in North America.

Sylvester EVA, Beiko RG, Bentzen P, Paterson I, Horne JB, Watson B, Lehnert S, Duffy S, Clément M, Robertson MJ, Bradbury IR.

Mol Ecol. 2018 Aug 27. doi: 10.1111/mec.14849. [Epub ahead of print]

PMID:
30152128
2.

PMERGE: Computational filtering of paralogous sequences from RAD-seq data.

Nadukkalam Ravindran P, Bentzen P, Bradbury IR, Beiko RG.

Ecol Evol. 2018 Jun 11;8(14):7002-7013. doi: 10.1002/ece3.4219. eCollection 2018 Jul.

3.

Genotyping-by-sequencing of genome-wide microsatellite loci reveals fine-scale harvest composition in a coastal Atlantic salmon fishery.

Bradbury IR, Wringe BF, Watson B, Paterson I, Horne J, Beiko R, Lehnert SJ, Clément M, Anderson EC, Jeffery NW, Duffy S, Sylvester E, Robertson M, Bentzen P.

Evol Appl. 2018 Mar 11;11(6):918-930. doi: 10.1111/eva.12606. eCollection 2018 Jul.

4.

Population connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast.

Britto FB, Schmidt AJ, Carvalho AMF, Vasconcelos CCMP, Farias AM, Bentzen P, Diniz FM.

PeerJ. 2018 Apr 30;6:e4702. doi: 10.7717/peerj.4702. eCollection 2018.

5.

Isolation and characterization of microsatellite markers in the spiny lobster, Panulirus echinatus Smith, 1869 (Decapoda: Palinuridae) by Illumina MiSeq sequencing.

Santos MF, Souza IGB, Gomes SO, Silva GR, Bentzen P, Diniz FM.

J Genet. 2018 Apr 11;97(1):e25-e30. No abstract available.

6.

A climate-associated multispecies cryptic cline in the northwest Atlantic.

Stanley RRE, DiBacco C, Lowen B, Beiko RG, Jeffery NW, Van Wyngaarden M, Bentzen P, Brickman D, Benestan L, Bernatchez L, Johnson C, Snelgrove PVR, Wang Z, Wringe BF, Bradbury IR.

Sci Adv. 2018 Mar 28;4(3):eaaq0929. doi: 10.1126/sciadv.aaq0929. eCollection 2018 Mar.

7.

Applications of random forest feature selection for fine-scale genetic population assignment.

Sylvester EVA, Bentzen P, Bradbury IR, Clément M, Pearce J, Horne J, Beiko RG.

Evol Appl. 2017 Sep 14;11(2):153-165. doi: 10.1111/eva.12524. eCollection 2018 Feb.

8.

Range-wide parallel climate-associated genomic clines in Atlantic salmon.

Jeffery NW, Stanley RRE, Wringe BF, Guijarro-Sabaniel J, Bourret V, Bernatchez L, Bentzen P, Beiko RG, Gilbey J, Clément M, Bradbury IR.

R Soc Open Sci. 2017 Nov 15;4(11):171394. doi: 10.1098/rsos.171394. eCollection 2017 Nov.

9.

Ancient chromosomal rearrangement associated with local adaptation of a postglacially colonized population of Atlantic Cod in the northwest Atlantic.

Sinclair-Waters M, Bradbury IR, Morris CJ, Lien S, Kent MP, Bentzen P.

Mol Ecol. 2018 Jan;27(2):339-351. doi: 10.1111/mec.14442. Epub 2017 Dec 27.

PMID:
29193392
10.

Evolutionary genetics of immunological supertypes reveals two faces of the Red Queen.

Lighten J, Papadopulos AST, Mohammed RS, Ward BJ, G Paterson I, Baillie L, Bradbury IR, Hendry AP, Bentzen P, van Oosterhout C.

Nat Commun. 2017 Nov 3;8(1):1294. doi: 10.1038/s41467-017-01183-2.

11.

Barcoding Atlantic Canada's mesopelagic and upper bathypelagic marine fishes.

Kenchington EL, Baillie SM, Kenchington TJ, Bentzen P.

PLoS One. 2017 Sep 20;12(9):e0185173. doi: 10.1371/journal.pone.0185173. eCollection 2017.

12.

Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions.

Berg PR, Star B, Pampoulie C, Bradbury IR, Bentzen P, Hutchings JA, Jentoft S, Jakobsen KS.

Heredity (Edinb). 2017 Dec;119(6):418-428. doi: 10.1038/hdy.2017.54. Epub 2017 Sep 20.

13.

Small-scale intraspecific patterns of adaptive immunogenetic polymorphisms and neutral variation in Lake Superior lake trout.

Baillie SM, Hemstock RR, Muir AM, Krueger CC, Bentzen P.

Immunogenetics. 2018 Jan;70(1):53-66. doi: 10.1007/s00251-017-0996-4. Epub 2017 May 25.

PMID:
28547520
14.

Adaptive phenotypic response to climate enabled by epigenetics in a K-strategy species, the fish Leucoraja ocellata (Rajidae).

Lighten J, Incarnato D, Ward BJ, van Oosterhout C, Bradbury I, Hanson M, Bentzen P.

R Soc Open Sci. 2016 Oct 26;3(10):160299. eCollection 2016 Oct.

15.

Genetic and phenotypic variation along an ecological gradient in lake trout Salvelinus namaycush.

Baillie SM, Muir AM, Hansen MJ, Krueger CC, Bentzen P.

BMC Evol Biol. 2016 Oct 19;16(1):219.

16.

megasat: automated inference of microsatellite genotypes from sequence data.

Zhan L, Paterson IG, Fraser BA, Watson B, Bradbury IR, Nadukkalam Ravindran P, Reznick D, Beiko RG, Bentzen P.

Mol Ecol Resour. 2017 Mar;17(2):247-256. doi: 10.1111/1755-0998.12561. Epub 2016 Jul 19.

PMID:
27333119
17.

Don't bet against the natal homing abilities of marine fishes.

Bentzen P, Bradbury IR.

Mol Ecol. 2016 Jun;25(12):2691-2. doi: 10.1111/mec.13591.

PMID:
27306459
18.

Annotated mitochondrial genome assemblies for two sand lances (genus: Ammodytes) from the northwest Atlantic.

Horne JB, Mcbride MC, Lighten J, Bradbury IR, Bentzen P.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4607-4608. Epub 2015 Dec 7.

PMID:
26643934
19.

Do stressful conditions make adaptation difficult? Guppies in the oil-polluted environments of southern Trinidad.

Rolshausen G, Phillip DA, Beckles DM, Akbari A, Ghoshal S, Hamilton PB, Tyler CR, Scarlett AG, Ramnarine I, Bentzen P, Hendry AP.

Evol Appl. 2015 Oct;8(9):854-70. doi: 10.1111/eva.12289. Epub 2015 Sep 4.

20.

Selection analysis on the rapid evolution of a secondary sexual trait.

Gordon SP, Reznick D, Arendt JD, Roughton A, Ontiveros Hernandez MN, Bentzen P, López-Sepulcre A.

Proc Biol Sci. 2015 Aug 22;282(1813):20151244. doi: 10.1098/rspb.2015.1244.

21.

Complete mitochondrial genomes for Icelus spatula, Aspidophoroides olrikii and Leptoclinus maculatus: pan-Arctic marine fishes from Canadian waters.

Swanburg T, Horne JB, Baillie S, King SD, McBride MC, Mackley MP, Paterson IG, Bradbury IR, Bentzen P.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2982-3. doi: 10.3109/19401736.2015.1060472. Epub 2015 Jun 30.

PMID:
26122337
22.

Long distance linkage disequilibrium and limited hybridization suggest cryptic speciation in atlantic cod.

Bradbury IR, Bowman S, Borza T, Snelgrove PV, Hutchings JA, Berg PR, Rodríguez-Ezpeleta N, Lighten J, Ruzzante DE, Taggart C, Bentzen P.

PLoS One. 2014 Sep 26;9(9):e106380. doi: 10.1371/journal.pone.0106380. eCollection 2014.

23.

Critical review of NGS analyses for de novo genotyping multigene families.

Lighten J, van Oosterhout C, Bentzen P.

Mol Ecol. 2014 Aug;23(16):3957-72. doi: 10.1111/mec.12843. Epub 2014 Jul 21. Review.

PMID:
24954669
24.

Human disturbance causes the formation of a hybrid swarm between two naturally sympatric fish species.

Hasselman DJ, Argo EE, McBride MC, Bentzen P, Schultz TF, Perez-Umphrey AA, Palkovacs EP.

Mol Ecol. 2014 Mar;23(5):1137-52. doi: 10.1111/mec.12674. Epub 2014 Feb 20.

PMID:
24450302
25.

Ultra-deep Illumina sequencing accurately identifies MHC class IIb alleles and provides evidence for copy number variation in the guppy (Poecilia reticulata).

Lighten J, van Oosterhout C, Paterson IG, McMullan M, Bentzen P.

Mol Ecol Resour. 2014 Jul;14(4):753-67. doi: 10.1111/1755-0998.12225. Epub 2014 Feb 5.

PMID:
24400817
26.

Gyrodactylus laevisoides n. sp. (Monogenea: Gyrodactylidae) infecting northern redbelly dace Phoxinus eos Cope (Cyprinidae) from Nova Scotia, Canada.

King SD, Cone DK, Mackley MP, Bentzen P.

Syst Parasitol. 2013 Nov;86(3):285-91. doi: 10.1007/s11230-013-9450-7. Epub 2013 Oct 27.

PMID:
24163028
27.

Description of Gyrodactylus mediotorus n. sp. (Monogenea: Gyrodactylidae) infecting spottail shiner (Notropis hudsonius) from the St. Lawrence River, Canada.

King SD, Marcogliese DJ, Forest JJ, McLaughlin JD, Bentzen P.

J Parasitol. 2013 Dec;99(6):1062-6. doi: 10.1645/13-216.1. Epub 2013 Jul 24.

PMID:
23883192
28.

Genomic islands of divergence and their consequences for the resolution of spatial structure in an exploited marine fish.

Bradbury IR, Hubert S, Higgins B, Bowman S, Borza T, Paterson IG, Snelgrove PV, Morris CJ, Gregory RS, Hardie D, Hutchings JA, Ruzzante DE, Taggart CT, Bentzen P.

Evol Appl. 2013 Apr;6(3):450-61. doi: 10.1111/eva.12026. Epub 2013 Jan 21.

29.

Beyond lifetime reproductive success: the posthumous reproductive dynamics of male Trinidadian guppies.

López-Sepulcre A, Gordon SP, Paterson IG, Bentzen P, Reznick DN.

Proc Biol Sci. 2013 Jun 5;280(1763):20131116. doi: 10.1098/rspb.2013.1116. Print 2013 Jul 22.

30.

Genetic diversity and differentiation in a wide ranging anadromous fish, American shad (Alosa sapidissima), is correlated with latitude.

Hasselman DJ, Ricard D, Bentzen P.

Mol Ecol. 2013 Mar;22(6):1558-73. doi: 10.1111/mec.12197. Epub 2013 Feb 4.

PMID:
23379260
31.

Barcoding Atlantic Canada's commonly encountered marine fishes.

McCusker MR, Denti D, Van Guelpen L, Kenchington E, Bentzen P.

Mol Ecol Resour. 2013 Mar;13(2):177-88. doi: 10.1111/1755-0998.12043. Epub 2012 Dec 17.

PMID:
23253798
32.

Adding parasites to the guppy-predation story: insights from field surveys.

Gotanda KM, Delaire LC, Raeymaekers JA, Pérez-Jvostov F, Dargent F, Bentzen P, Scott ME, Fussmann GF, Hendry AP.

Oecologia. 2013 May;172(1):155-66. doi: 10.1007/s00442-012-2485-7. Epub 2012 Oct 9.

PMID:
23053240
33.

DNA barcoding of Canada's skates.

Coulson MW, Denti D, Van Guelpen L, Miri C, Kenchington E, Bentzen P.

Mol Ecol Resour. 2011 Nov;11(6):968-78. doi: 10.1111/j.1755-0998.2011.03034.x. Epub 2011 Jun 9.

PMID:
21658180
34.

Evaluating SNP ascertainment bias and its impact on population assignment in Atlantic cod, Gadus morhua.

Bradbury IR, Hubert S, Higgins B, Bowman S, Paterson IG, Snelgrove PV, Morris CJ, Gregory RS, Hardie DC, Borza T, Bentzen P.

Mol Ecol Resour. 2011 Mar;11 Suppl 1:218-25. doi: 10.1111/j.1755-0998.2010.02949.x.

PMID:
21429176
35.

Eco-evolutionary effects on population recovery following catastrophic disturbance.

Weese DJ, Schwartz AK, Bentzen P, Hendry AP, Kinnison MT.

Evol Appl. 2011 Mar;4(2):354-66. doi: 10.1111/j.1752-4571.2010.00169.x.

36.

Isolation and differentiation of Rivulus hartii across Trinidad and neighboring islands.

Walter RP, Blum MJ, Snider SB, Paterson IG, Bentzen P, Lamphere BA, Gilliam JF.

Mol Ecol. 2011 Feb;20(3):601-18. doi: 10.1111/j.1365-294X.2010.04968.x. Epub 2010 Dec 29.

PMID:
21199028
37.

Both geography and ecology contribute to mating isolation in guppies.

Schwartz AK, Weese DJ, Bentzen P, Kinnison MT, Hendry AP.

PLoS One. 2010 Dec 15;5(12):e15659. doi: 10.1371/journal.pone.0015659.

38.

Positive relationships between genetic diversity and abundance in fishes.

McCusker MR, Bentzen P.

Mol Ecol. 2010 Nov;19(22):4852-62. doi: 10.1111/j.1365-294X.2010.04822.x. Epub 2010 Sep 17.

PMID:
20849560
39.

Historical influences dominate the population genetic structure of a sedentary marine fish, Atlantic wolffish (Anarhichas lupus), across the North Atlantic Ocean.

McCusker MR, Bentzen P.

Mol Ecol. 2010 Oct;19(19):4228-41. doi: 10.1111/j.1365-294X.2010.04806.x. Epub 2010 Sep 3.

PMID:
20819162
40.

Structural and functional connectivity of marine fishes within a semi-enclosed Newfoundland fjord.

Bradbury IR, Snelgrove PV, Bentzen P, de Young B, Gregory RS, Morris CJ.

J Fish Biol. 2009 Oct;75(6):1393-409. doi: 10.1111/j.1095-8649.2009.02391.x.

PMID:
20738621
41.

Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature.

Bradbury IR, Hubert S, Higgins B, Borza T, Bowman S, Paterson IG, Snelgrove PV, Morris CJ, Gregory RS, Hardie DC, Hutchings JA, Ruzzante DE, Taggart CT, Bentzen P.

Proc Biol Sci. 2010 Dec 22;277(1701):3725-34. doi: 10.1098/rspb.2010.0985. Epub 2010 Jun 30.

42.

Phylogeography of 3 North Atlantic Wolffish species (Anarhichas spp.) with phylogenetic relationships within the family Anarhichadidae.

McCusker MR, Bentzen P.

J Hered. 2010 Sep-Oct;101(5):591-601. doi: 10.1093/jhered/esq062. Epub 2010 May 28.

PMID:
20511379
43.

Population structure as revealed by mtDNA and microsatellites in northern fur seals, Callorhinus ursinus, throughout their range.

Dickerson BR, Ream RR, Vignieri SN, Bentzen P.

PLoS One. 2010 May 17;5(5):e10671. doi: 10.1371/journal.pone.0010671.

44.

Genome-wide single nucleotide polymorphisms reveal population history and adaptive divergence in wild guppies.

Willing EM, Bentzen P, van Oosterhout C, Hoffmann M, Cable J, Breden F, Weigel D, Dreyer C.

Mol Ecol. 2010 Mar;19(5):968-84. doi: 10.1111/j.1365-294X.2010.04528.x. Epub 2010 Feb 8.

PMID:
20149094
45.

Polymorphic microsatellite DNA markers in the mangrove crab Ucides cordatus (Brachyura: Ocypodidae).

Britto FB, Diniz FM, Paterson I, Bentzen P.

Mol Ecol Resour. 2009 Jul;9(4):1249-52. doi: 10.1111/j.1755-0998.2009.02658.x. Epub 2009 Mar 23.

PMID:
21564892
46.

Mixed evidence for reduced local adaptation in wild salmon resulting from interbreeding with escaped farmed salmon: complexities in hybrid fitness.

Fraser DJ, Cook AM, Eddington JD, Bentzen P, Hutchings JA.

Evol Appl. 2008 Aug;1(3):501-12. doi: 10.1111/j.1752-4571.2008.00037.x. Epub 2008 Jun 2.

47.

Global patterns in marine dispersal estimates: the influence of geography, taxonomic category and life history.

Bradbury IR, Laurel B, Snelgrove PV, Bentzen P, Campana SE.

Proc Biol Sci. 2008 Aug 7;275(1644):1803-9. doi: 10.1098/rspb.2008.0216.

48.

Estimating contemporary early life-history dispersal in an estuarine fish: integrating molecular and otolith elemental approaches.

Bradbury IR, Campana SE, Bentzen P.

Mol Ecol. 2008 Mar;17(6):1438-50. doi: 10.1111/j.1365-294X.2008.03694.x.

PMID:
18321254
49.

Identifying Canadian freshwater fishes through DNA barcodes.

Hubert N, Hanner R, Holm E, Mandrak NE, Taylor E, Burridge M, Watkinson D, Dumont P, Curry A, Bentzen P, Zhang J, April J, Bernatchez L.

PLoS One. 2008;3(6):e2490. doi: 10.1371/journal.pone.0002490. Epub 2008 Jun 18.

50.

Stimulation of erythrocyte cell membrane scrambling by amiodarone.

Nicolay JP, Bentzen PJ, Ghashghaeinia M, Wieder T, Lang F.

Cell Physiol Biochem. 2007;20(6):1043-50. Epub 2007 Oct 30.

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