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Items: 1 to 50 of 632

1.

ExpansionHunter: A sequence-graph based tool to analyze variation in short tandem repeat regions.

Dolzhenko E, Deshpande V, Schlesinger F, Krusche P, Petrovski R, Chen S, Emig-Agius D, Gross A, Narzisi G, Bowman B, Scheffler K, van Vugt JJFA, French C, Sanchis-Juan A, Ibáñez K, Tucci A, Lajoie B, Veldink JH, Raymond FL, Taft RJ, Bentley DR, Eberle MA.

Bioinformatics. 2019 May 27. pii: btz431. doi: 10.1093/bioinformatics/btz431. [Epub ahead of print]

PMID:
31134279
2.

A Physiological Overview of the Demands, Characteristics, and Adaptations of Highly Trained Artistic Swimmers: a Literature Review.

Viana E, Bentley DJ, Logan-Sprenger HM.

Sports Med Open. 2019 May 14;5(1):16. doi: 10.1186/s40798-019-0190-3. Review.

3.

Training Considerations for Optimising Endurance Development: An Alternate Concurrent Training Perspective.

Doma K, Deakin GB, Schumann M, Bentley DJ.

Sports Med. 2019 May;49(5):669-682. doi: 10.1007/s40279-019-01072-2. Review.

PMID:
30847824
4.

Sprinting After Having Sprinted: Prior High-Intensity Stochastic Cycling Impairs the Winning Strike for Gold.

Etxebarria N, Ingham SA, Ferguson RA, Bentley DJ, Pyne DB.

Front Physiol. 2019 Feb 14;10:100. doi: 10.3389/fphys.2019.00100. eCollection 2019.

5.

Clinical whole genome sequencing as a first-tier test at a resource-limited dysmorphology clinic in Mexico.

Scocchia A, Wigby KM, Masser-Frye D, Del Campo M, Galarreta CI, Thorpe E, McEachern J, Robinson K, Gross A; ICSL Interpretation and Reporting Team, Ajay SS, Rajan V, Perry DL, Belmont JW, Bentley DR, Jones MC, Taft RJ.

NPJ Genom Med. 2019 Feb 14;4:5. doi: 10.1038/s41525-018-0076-1. eCollection 2019.

6.

Long-term clinical outcomes and technical factors with the Wallstent for treatment of chronic iliofemoral venous obstruction.

Gagne PJ, Gagne N, Kucher T, Thompson M, Bentley D.

J Vasc Surg Venous Lymphat Disord. 2019 Jan;7(1):45-55. doi: 10.1016/j.jvsv.2018.07.016. Epub 2018 Oct 24.

PMID:
30558730
7.
8.

Widespread Backtracking by RNA Pol II Is a Major Effector of Gene Activation, 5' Pause Release, Termination, and Transcription Elongation Rate.

Sheridan RM, Fong N, D'Alessandro A, Bentley DL.

Mol Cell. 2019 Jan 3;73(1):107-118.e4. doi: 10.1016/j.molcel.2018.10.031. Epub 2018 Nov 29.

PMID:
30503775
9.

Copy-number variants in clinical genome sequencing: deployment and interpretation for rare and undiagnosed disease.

Gross AM, Ajay SS, Rajan V, Brown C, Bluske K, Burns NJ, Chawla A, Coffey AJ, Malhotra A, Scocchia A, Thorpe E, Dzidic N, Hovanes K, Sahoo T, Dolzhenko E, Lajoie B, Khouzam A, Chowdhury S, Belmont J, Roller E, Ivakhno S, Tanner S, McEachern J, Hambuch T, Eberle M, Hagelstrom RT, Bentley DR, Perry DL, Taft RJ.

Genet Med. 2019 May;21(5):1121-1130. doi: 10.1038/s41436-018-0295-y. Epub 2018 Oct 8.

PMID:
30293986
10.

A theory-based multi-component intervention to increase reactive balance measurement by physiotherapists in three rehabilitation hospitals: an uncontrolled single group study.

Sibley KM, Bentley DC, Salbach NM, Gardner P, McGlynn M, O'Hoski S, Shaffer J, Shing P, McEwen S, Beauchamp MK, Hossain S, Straus SE, Jaglal SB.

BMC Health Serv Res. 2018 Sep 19;18(1):724. doi: 10.1186/s12913-018-3533-8.

11.

Interprofessional education and practice guide No. 9: Sustaining interprofessional simulation using change management principles.

Kumar A, Kent F, Wallace EM, McLelland G, Bentley D, Koutsoukos A, Nestel D.

J Interprof Care. 2018 Aug 30:1-8. doi: 10.1080/13561820.2018.1511525. [Epub ahead of print]

PMID:
30160555
12.

Dynamic turnover of paused Pol II complexes at human promoters.

Erickson B, Sheridan RM, Cortazar M, Bentley DL.

Genes Dev. 2018 Sep 1;32(17-18):1215-1225. doi: 10.1101/gad.316810.118. Epub 2018 Aug 27.

13.

Comparison of Reduced-Volume High-Intensity Interval Training and High-Volume Training on Endurance Performance in Triathletes.

Mallol M, Bentley DJ, Norton L, Norton K, Mejuto G, Yanci J.

Int J Sports Physiol Perform. 2019 Feb 1;14(2):239-245. doi: 10.1123/ijspp.2018-0359. Epub 2019 Jan 2.

PMID:
30080432
14.

Characterizing and Comparing Acute Responses of Blood Pressure, Heart Rate, and Forearm Blood Flow to 2 Handgrip Protocols.

Bentley DC, Thomas SG.

J Cardiopulm Rehabil Prev. 2018 Nov;38(6):400-405. doi: 10.1097/HCR.0000000000000344.

PMID:
29952807
15.

Familial congenital cataract, coloboma, and nystagmus phenotype with variable expression caused by mutation in PAX6 in a South African family.

Goolam S, Carstens N, Ross M, Bentley D, Lopes M, Peden J, Kingsbury Z, Tsogka E, Barlow R, Carmichael TR, Ramsay M, Williams SE.

Mol Vis. 2018 Jun 9;24:407-413. eCollection 2018.

16.

Clinical-grade validation of whole genome sequencing reveals robust detection of low-frequency variants and copy number alterations in CLL.

Klintman J, Barmpouti K, Knight SJL, Robbe P, Dreau H, Clifford R, Ridout K, Burns A, Timbs A, Bruce D, Antoniou P, Sosinsky A, Becq J, Bentley D, Hillmen P, Taylor JC, Caulfield M, Schuh AH.

Br J Haematol. 2018 Aug;182(3):412-417. doi: 10.1111/bjh.15406. Epub 2018 May 29.

PMID:
29808933
17.

Clinical Pharmacokinetics and Pharmacodynamics of Dalcetrapib.

Black DM, Bentley D, Chapel S, Lee J, Briggs E, Heinonen T.

Clin Pharmacokinet. 2018 Nov;57(11):1359-1367. doi: 10.1007/s40262-018-0656-3. Review.

18.

Corrigendum: Transcription elongation rate affects nascent histone pre-mRNA folding and 3' end processing.

Saldi T, Fong N, Bentley DL.

Genes Dev. 2018 Apr 1;32(7-8):592. doi: 10.1101/gad.314948.118. No abstract available.

19.

The effect of ice slurry ingestion on body temperature and cycling performance in competitive athletes.

Mejuto G, Chalmers S, Gilbert S, Bentley D.

J Therm Biol. 2018 Feb;72:143-147. doi: 10.1016/j.jtherbio.2018.01.012. Epub 2018 Feb 2.

PMID:
29496007
20.

Transcription elongation rate affects nascent histone pre-mRNA folding and 3' end processing.

Saldi T, Fong N, Bentley DL.

Genes Dev. 2018 Feb 1;32(3-4):297-308. doi: 10.1101/gad.310896.117. Epub 2018 Feb 26. Erratum in: Genes Dev. 2018 Apr 1;32(7-8):592.

21.

High-intensity handgrip training lowers blood pressure and increases heart rate complexity among postmenopausal women: a pilot study.

Bentley DC, Nguyen CHP, Thomas SG.

Blood Press Monit. 2018 Apr;23(2):71-78. doi: 10.1097/MBP.0000000000000313.

PMID:
29420320
22.

Clinical whole-genome sequencing from routine formalin-fixed, paraffin-embedded specimens: pilot study for the 100,000 Genomes Project.

Robbe P, Popitsch N, Knight SJL, Antoniou P, Becq J, He M, Kanapin A, Samsonova A, Vavoulis DV, Ross MT, Kingsbury Z, Cabes M, Ramos SDC, Page S, Dreau H, Ridout K, Jones LJ, Tuff-Lacey A, Henderson S, Mason J, Buffa FM, Verrill C, Maldonado-Perez D, Roxanis I, Collantes E, Browning L, Dhar S, Damato S, Davies S, Caulfield M, Bentley DR, Taylor JC, Turnbull C, Schuh A; 100,000 Genomes Project.

Genet Med. 2018 Oct;20(10):1196-1205. doi: 10.1038/gim.2017.241. Epub 2018 Feb 1.

23.

The initial report on 1-year outcomes of the feasibility study of the VENITI VICI VENOUS STENT in symptomatic iliofemoral venous obstruction.

Razavi M, Marston W, Black S, Bentley D, Neglén P.

J Vasc Surg Venous Lymphat Disord. 2018 Mar;6(2):192-200. doi: 10.1016/j.jvsv.2017.10.014. Epub 2017 Dec 28.

PMID:
29290601
24.

Base resolution maps reveal the importance of 5-hydroxymethylcytosine in a human glioblastoma.

Raiber EA, Beraldi D, Martínez Cuesta S, McInroy GR, Kingsbury Z, Becq J, James T, Lopes M, Allinson K, Field S, Humphray S, Santarius T, Watts C, Bentley D, Balasubramanian S.

NPJ Genom Med. 2017 Mar 13;2:6. doi: 10.1038/s41525-017-0007-6. eCollection 2017.

25.

Whole-genome sequencing of chronic lymphocytic leukaemia reveals distinct differences in the mutational landscape between IgHVmut and IgHVunmut subgroups.

Burns A, Alsolami R, Becq J, Stamatopoulos B, Timbs A, Bruce D, Robbe P, Vavoulis D, Clifford R, Cabes M, Dreau H, Taylor J, Knight SJL, Mansson R, Bentley D, Beekman R, Martín-Subero JI, Campo E, Houlston RS, Ridout KE, Schuh A.

Leukemia. 2018 Feb;32(2):573. doi: 10.1038/leu.2017.311. Epub 2017 Nov 21.

26.

Detection of long repeat expansions from PCR-free whole-genome sequence data.

Dolzhenko E, van Vugt JJFA, Shaw RJ, Bekritsky MA, van Blitterswijk M, Narzisi G, Ajay SS, Rajan V, Lajoie BR, Johnson NH, Kingsbury Z, Humphray SJ, Schellevis RD, Brands WJ, Baker M, Rademakers R, Kooyman M, Tazelaar GHP, van Es MA, McLaughlin R, Sproviero W, Shatunov A, Jones A, Al Khleifat A, Pittman A, Morgan S, Hardiman O, Al-Chalabi A, Shaw C, Smith B, Neo EJ, Morrison K, Shaw PJ, Reeves C, Winterkorn L, Wexler NS; US–Venezuela Collaborative Research Group, Housman DE, Ng CW, Li AL, Taft RJ, van den Berg LH, Bentley DR, Veldink JH, Eberle MA.

Genome Res. 2017 Nov;27(11):1895-1903. doi: 10.1101/gr.225672.117. Epub 2017 Sep 8.

27.

Pharmacodynamic Monitoring of RO5459072, a Small Molecule Inhibitor of Cathepsin S.

Theron M, Bentley D, Nagel S, Manchester M, Gerg M, Schindler T, Silva A, Ecabert B, Teixeira P, Perret C, Reis B.

Front Immunol. 2017 Jul 17;8:806. doi: 10.3389/fimmu.2017.00806. eCollection 2017.

28.

Human TFIIH Kinase CDK7 Regulates Transcription-Associated Chromatin Modifications.

Ebmeier CC, Erickson B, Allen BL, Allen MA, Kim H, Fong N, Jacobsen JR, Liang K, Shilatifard A, Dowell RD, Old WM, Bentley DL, Taatjes DJ.

Cell Rep. 2017 Aug 1;20(5):1173-1186. doi: 10.1016/j.celrep.2017.07.021.

29.

The Veterans Affairs Cardiac Risk Score: Recalibrating the Atherosclerotic Cardiovascular Disease Score for Applied Use.

Sussman JB, Wiitala WL, Zawistowski M, Hofer TP, Bentley D, Hayward RA.

Med Care. 2017 Sep;55(9):864-870. doi: 10.1097/MLR.0000000000000781.

30.

Erratum to: Implications of Impaired Endurance Performance Following Single Bouts of Resistance Training: An Alternate Concurrent Training Perspective.

Doma K, Deakin GB, Bentley DJ.

Sports Med. 2017 Dec;47(12):2671. doi: 10.1007/s40279-017-0766-3. No abstract available.

PMID:
28752468
31.

Breast Cancer Suppression by Progesterone Receptors Is Mediated by Their Modulation of Estrogen Receptors and RNA Polymerase III.

Finlay-Schultz J, Gillen AE, Brechbuhl HM, Ivie JJ, Matthews SB, Jacobsen BM, Bentley DL, Kabos P, Sartorius CA.

Cancer Res. 2017 Sep 15;77(18):4934-4946. doi: 10.1158/0008-5472.CAN-16-3541. Epub 2017 Jul 20.

32.

Implications of Impaired Endurance Performance following Single Bouts of Resistance Training: An Alternate Concurrent Training Perspective.

Doma K, Deakin GB, Bentley DJ.

Sports Med. 2017 Nov;47(11):2187-2200. doi: 10.1007/s40279-017-0758-3. Review. Erratum in: Sports Med. 2017 Dec;47(12 ):2671.

PMID:
28702901
33.

Embedding assessment in a simulation skills training program for medical and midwifery students: A pre- and post-intervention evaluation.

Kumar A, Nestel D, East C, Hay M, Lichtwark I, McLelland G, Bentley D, Hall H, Fernando S, Hobson S, Larmour L, Dekoninck P, Wallace EM.

Aust N Z J Obstet Gynaecol. 2018 Feb;58(1):40-46. doi: 10.1111/ajo.12659. Epub 2017 Jun 28.

PMID:
28656616
34.

Whole-genome sequencing of chronic lymphocytic leukaemia reveals distinct differences in the mutational landscape between IgHVmut and IgHVunmut subgroups.

Burns A, Alsolami R, Becq J, Stamatopoulos B, Timbs A, Bruce D, Robbe P, Vavoulis D, Clifford R, Cabes M, Dreau H, Taylor J, Knight SJL, Mansson R, Bentley D, Beekman R, Martín-Subero JI, Campo E, Houlston RS, Ridout KE, Schuh A.

Leukemia. 2018 Feb;32(2):332-342. doi: 10.1038/leu.2017.177. Epub 2017 Jun 6. Erratum in: Leukemia. 2017 Nov 21;:.

35.

RNA Pol II Dynamics Modulate Co-transcriptional Chromatin Modification, CTD Phosphorylation, and Transcriptional Direction.

Fong N, Saldi T, Sheridan RM, Cortazar MA, Bentley DL.

Mol Cell. 2017 May 18;66(4):546-557.e3. doi: 10.1016/j.molcel.2017.04.016. Epub 2017 May 11.

36.

Laboratory-based high pressure X-ray photoelectron spectroscopy: A novel and flexible reaction cell approach.

Kerherve G, Regoutz A, Bentley D, Hood C, Feeley K, Knight S, Robson A, Turner C, Singh N, Pontefract J, Åhlund J, Kahk JM, Villar-Garcia IJ, Payne DJ.

Rev Sci Instrum. 2017 Mar;88(3):033102. doi: 10.1063/1.4975096.

37.

Corrected ROC analysis for misclassified binary outcomes.

Zawistowski M, Sussman JB, Hofer TP, Bentley D, Hayward RA, Wiitala WL.

Stat Med. 2017 Jun 15;36(13):2148-2160. doi: 10.1002/sim.7260. Epub 2017 Feb 28.

38.

Characterising Drug Release from Immediate-Release Formulations of a Poorly Soluble Compound, Basmisanil, Through Absorption Modelling and Dissolution Testing.

Stillhart C, Parrott NJ, Lindenberg M, Chalus P, Bentley D, Szepes A.

AAPS J. 2017 May;19(3):827-836. doi: 10.1208/s12248-017-0060-1. Epub 2017 Feb 24.

PMID:
28236228
39.

A preliminary investigation of the Partners in Health scale measurement properties in patients with end stage renal disease.

Baxter C, Morello A, Smith D, Norton L, Bentley D.

Aust J Prim Health. 2017 Jul;23(3):288-293. doi: 10.1071/PY16095.

PMID:
28076747
40.

Sodium bicarbonate ingestion and individual variability in time-to-peak pH.

Sparks A, Williams E, Robinson A, Miller P, Bentley DJ, Bridge C, Mc Naughton LR.

Res Sports Med. 2017 Jan-Mar;25(1):58-66. doi: 10.1080/15438627.2016.1258645. Epub 2016 Dec 9.

PMID:
27934546
41.

Impact of stretching on the performance and injury risk of long-distance runners.

Baxter C, Mc Naughton LR, Sparks A, Norton L, Bentley D.

Res Sports Med. 2017 Jan-Mar;25(1):78-90. doi: 10.1080/15438627.2016.1258640. Epub 2016 Dec 2. Review.

PMID:
27912252
42.

A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree.

Eberle MA, Fritzilas E, Krusche P, Källberg M, Moore BL, Bekritsky MA, Iqbal Z, Chuang HY, Humphray SJ, Halpern AL, Kruglyak S, Margulies EH, McVean G, Bentley DR.

Genome Res. 2017 Jan;27(1):157-164. doi: 10.1101/gr.210500.116. Epub 2016 Nov 30.

43.

Acute aerobic exercise increases implicit approach motivation for dessert images.

May CN, Nock NL, Bentley D, Demaree HA.

J Health Psychol. 2018 May;23(6):807-817. doi: 10.1177/1359105316657404. Epub 2016 Jul 10.

PMID:
27402729
44.

Recent Developments in the Use of Sodium Bicarbonate as an Ergogenic Aid.

McNaughton LR, Gough L, Deb S, Bentley D, Sparks SA.

Curr Sports Med Rep. 2016 Jul-Aug;15(4):233-44. doi: 10.1249/JSR.0000000000000283. Review.

PMID:
27399820
45.

Maximal intermittent handgrip strategy: design and evaluation of an exercise protocol and a grip tool.

Bentley DC, Thomas SG.

Clin Interv Aging. 2016 May 10;11:589-601. doi: 10.2147/CIA.S103046. eCollection 2016.

46.

Erratum: The somatic mutation profiles of 2,433 breast cancers refine their genomic and transcriptomic landscapes.

Pereira B, Chin SF, Rueda OM, Vollan HK, Provenzano E, Bardwell HA, Pugh M, Jones L, Russell R, Sammut SJ, Tsui DW, Liu B, Dawson SJ, Abraham J, Northen H, Peden JF, Mukherjee A, Turashvili G, Green AR, McKinney S, Oloumi A, Shah S, Rosenfeld N, Murphy L, Bentley DR, Ellis IO, Purushotham A, Pinder SE, Børresen-Dale AL, Earl HM, Pharoah PD, Ross MT, Aparicio S, Caldas C.

Nat Commun. 2016 Jun 6;7:11908. doi: 10.1038/ncomms11908. No abstract available.

47.

Musculoskeletal Lower Limb Injury Risk in Army Populations.

Andersen KA, Grimshaw PN, Kelso RM, Bentley DJ.

Sports Med Open. 2016;2:22. Epub 2016 Apr 29. Review.

48.

The somatic mutation profiles of 2,433 breast cancers refines their genomic and transcriptomic landscapes.

Pereira B, Chin SF, Rueda OM, Vollan HK, Provenzano E, Bardwell HA, Pugh M, Jones L, Russell R, Sammut SJ, Tsui DW, Liu B, Dawson SJ, Abraham J, Northen H, Peden JF, Mukherjee A, Turashvili G, Green AR, McKinney S, Oloumi A, Shah S, Rosenfeld N, Murphy L, Bentley DR, Ellis IO, Purushotham A, Pinder SE, Børresen-Dale AL, Earl HM, Pharoah PD, Ross MT, Aparicio S, Caldas C.

Nat Commun. 2016 May 10;7:11479. doi: 10.1038/ncomms11479.

49.

Combination esthetic treatment of anterior teeth affected by idiopathic enamel hypoplasia: a case report.

Roberts DL, Warner BF, Bentley DA, Quock RL.

Gen Dent. 2016 May-Jun;64(3):47-50.

PMID:
27148656
50.

Coupling of RNA Polymerase II Transcription Elongation with Pre-mRNA Splicing.

Saldi T, Cortazar MA, Sheridan RM, Bentley DL.

J Mol Biol. 2016 Jun 19;428(12):2623-2635. doi: 10.1016/j.jmb.2016.04.017. Epub 2016 Apr 20. Review.

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