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Items: 33

1.

EspL is essential for virulence and stabilizes EspE, EspF and EspH levels in Mycobacterium tuberculosis.

Sala C, Odermatt NT, Soler-Arnedo P, Gülen MF, von Schultz S, Benjak A, Cole ST.

PLoS Pathog. 2018 Dec 20;14(12):e1007491. doi: 10.1371/journal.ppat.1007491. eCollection 2018 Dec.

2.

Arylvinylpiperazine Amides, a New Class of Potent Inhibitors Targeting QcrB of Mycobacterium tuberculosis.

Foo CS, Lupien A, Kienle M, Vocat A, Benjak A, Sommer R, Lamprecht DA, Steyn AJC, Pethe K, Piton J, Altmann KH, Cole ST.

MBio. 2018 Oct 9;9(5). pii: e01276-18. doi: 10.1128/mBio.01276-18.

3.

Highly Reduced Genome of the New Species Mycobacterium uberis, the Causative Agent of Nodular Thelitis and Tuberculoid Scrotitis in Livestock and a Close Relative of the Leprosy Bacilli.

Benjak A, Avanzi C, Benito Y, Breysse F, Chartier C, Boschiroli ML, Fourichon C, Michelet L, Pin D, Flandrois JP, Bruyere P, Dumitrescu O, Cole ST, Lina G.

mSphere. 2018 Oct 3;3(5). pii: e00405-18. doi: 10.1128/mSphere.00405-18.

4.

Essential Nucleoid Associated Protein mIHF (Rv1388) Controls Virulence and Housekeeping Genes in Mycobacterium tuberculosis.

Odermatt NT, Sala C, Benjak A, Cole ST.

Sci Rep. 2018 Sep 21;8(1):14214. doi: 10.1038/s41598-018-32340-2.

5.

Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe.

Schuenemann VJ, Avanzi C, Krause-Kyora B, Seitz A, Herbig A, Inskip S, Bonazzi M, Reiter E, Urban C, Dangvard Pedersen D, Taylor GM, Singh P, Stewart GR, Velemínský P, Likovsky J, Marcsik A, Molnár E, Pálfi G, Mariotti V, Riga A, Belcastro MG, Boldsen JL, Nebel A, Mays S, Donoghue HD, Zakrzewski S, Benjak A, Nieselt K, Cole ST, Krause J.

PLoS Pathog. 2018 May 10;14(5):e1006997. doi: 10.1371/journal.ppat.1006997. eCollection 2018 May.

6.

Phylogenomics and antimicrobial resistance of the leprosy bacillus Mycobacterium leprae.

Benjak A, Avanzi C, Singh P, Loiseau C, Girma S, Busso P, Fontes ANB, Miyamoto Y, Namisato M, Bobosha K, Salgado CG, da Silva MB, Bouth RC, Frade MAC, Filho FB, Barreto JG, Nery JAC, Bührer-Sékula S, Lupien A, Al-Samie AR, Al-Qubati Y, Alkubati AS, Bretzel G, Vera-Cabrera L, Sakho F, Johnson CR, Kodio M, Fomba A, Sow SO, Gado M, Konaté O, Stefani MMA, Penna GO, Suffys PN, Sarno EN, Moraes MO, Rosa PS, Baptista IMFD, Spencer JS, Aseffa A, Matsuoka M, Kai M, Cole ST.

Nat Commun. 2018 Jan 24;9(1):352. doi: 10.1038/s41467-017-02576-z.

7.

Insights from the Genome Sequence of Mycobacterium lepraemurium: Massive Gene Decay and Reductive Evolution.

Benjak A, Honap TP, Avanzi C, Becerril-Villanueva E, Estrada-García I, Rojas-Espinosa O, Stone AC, Cole ST.

MBio. 2017 Oct 17;8(5). pii: e01283-17. doi: 10.1128/mBio.01283-17.

8.

Whole genome sequencing distinguishes between relapse and reinfection in recurrent leprosy cases.

Stefani MMA, Avanzi C, Bührer-Sékula S, Benjak A, Loiseau C, Singh P, Pontes MAA, Gonçalves HS, Hungria EM, Busso P, Piton J, Silveira MIS, Cruz R, Schetinni A, Costa MB, Virmond MCL, Diorio SM, Dias-Baptista IMF, Rosa PS, Matsuoka M, Penna MLF, Cole ST, Penna GO.

PLoS Negl Trop Dis. 2017 Jun 15;11(6):e0005598. doi: 10.1371/journal.pntd.0005598. eCollection 2017 Jun.

9.

Rv3852 (H-NS) of Mycobacterium tuberculosis Is Not Involved in Nucleoid Compaction and Virulence Regulation.

Odermatt NT, Sala C, Benjak A, Kolly GS, Vocat A, Lupien A, Cole ST.

J Bacteriol. 2017 Jul 25;199(16). pii: e00129-17. doi: 10.1128/JB.00129-17. Print 2017 Aug 15.

10.

Essentiality of mmpL3 and impact of its silencing on Mycobacterium tuberculosis gene expression.

Degiacomi G, Benjak A, Madacki J, Boldrin F, Provvedi R, Palù G, Kordulakova J, Cole ST, Manganelli R.

Sci Rep. 2017 Feb 27;7:43495. doi: 10.1038/srep43495.

11.

Red squirrels in the British Isles are infected with leprosy bacilli.

Avanzi C, Del-Pozo J, Benjak A, Stevenson K, Simpson VR, Busso P, McLuckie J, Loiseau C, Lawton C, Schoening J, Shaw DJ, Piton J, Vera-Cabrera L, Velarde-Felix JS, McDermott F, Gordon SV, Cole ST, Meredith AL.

Science. 2016 Nov 11;354(6313):744-747.

PMID:
27846605
12.

Transmission of Drug-Resistant Leprosy in Guinea-Conakry Detected Using Molecular Epidemiological Approaches.

Avanzi C, Busso P, Benjak A, Loiseau C, Fomba A, Doumbia G, Camara I, Lamou A, Sock G, Drame T, Kodio M, Sakho F, Sow SO, Cole ST, Johnson RC.

Clin Infect Dis. 2016 Dec 1;63(11):1482-1484. Epub 2016 Aug 23.

PMID:
27558568
13.

Micrococcin P1 - A bactericidal thiopeptide active against Mycobacterium tuberculosis.

Degiacomi G, Personne Y, Mondésert G, Ge X, Mandava CS, Hartkoorn RC, Boldrin F, Goel P, Peisker K, Benjak A, Barrio MB, Ventura M, Brown AC, Leblanc V, Bauer A, Sanyal S, Cole ST, Lagrange S, Parish T, Manganelli R.

Tuberculosis (Edinb). 2016 Sep;100:95-101. doi: 10.1016/j.tube.2016.07.011. Epub 2016 Jul 27.

PMID:
27553416
14.

Genomic and transcriptomic analysis of the streptomycin-dependent Mycobacterium tuberculosis strain 18b.

Benjak A, Uplekar S, Zhang M, Piton J, Cole ST, Sala C.

BMC Genomics. 2016 Mar 5;17:190. doi: 10.1186/s12864-016-2528-2.

15.

Defining the nitrogen regulated transcriptome of Mycobacterium smegmatis using continuous culture.

Petridis M, Benjak A, Cook GM.

BMC Genomics. 2015 Oct 19;16:821. doi: 10.1186/s12864-015-2051-x.

16.

Lansoprazole is an antituberculous prodrug targeting cytochrome bc1.

Rybniker J, Vocat A, Sala C, Busso P, Pojer F, Benjak A, Cole ST.

Nat Commun. 2015 Jul 9;6:7659. doi: 10.1038/ncomms8659.

17.

Insight into the evolution and origin of leprosy bacilli from the genome sequence of Mycobacterium lepromatosis.

Singh P, Benjak A, Schuenemann VJ, Herbig A, Avanzi C, Busso P, Nieselt K, Krause J, Vera-Cabrera L, Cole ST.

Proc Natl Acad Sci U S A. 2015 Apr 7;112(14):4459-64. doi: 10.1073/pnas.1421504112. Epub 2015 Mar 23.

18.

Mycobacterium lepromatosis Infections in Nuevo León, Mexico.

Vera-Cabrera L, Escalante-Fuentes W, Ocampo-Garza SS, Ocampo-Candiani J, Molina-Torres CA, Avanzi C, Benjak A, Busso P, Singh P, Cole ST.

J Clin Microbiol. 2015 Jun;53(6):1945-6. doi: 10.1128/JCM.03667-14. Epub 2015 Mar 25.

19.

Whole-transcriptome sequencing for high-resolution transcriptomic analysis in Mycobacterium tuberculosis.

Benjak A, Sala C, Hartkoorn RC.

Methods Mol Biol. 2015;1285:17-30. doi: 10.1007/978-1-4939-2450-9_2.

PMID:
25779308
20.

Whole-genome sequencing for comparative genomics and de novo genome assembly.

Benjak A, Sala C, Hartkoorn RC.

Methods Mol Biol. 2015;1285:1-16. doi: 10.1007/978-1-4939-2450-9_1.

PMID:
25779307
21.

Anticytolytic screen identifies inhibitors of mycobacterial virulence protein secretion.

Rybniker J, Chen JM, Sala C, Hartkoorn RC, Vocat A, Benjak A, Boy-Röttger S, Zhang M, Székely R, Greff Z, Orfi L, Szabadkai I, Pató J, Kéri G, Cole ST.

Cell Host Microbe. 2014 Oct 8;16(4):538-48. doi: 10.1016/j.chom.2014.09.008.

22.

The PhoP-dependent ncRNA Mcr7 modulates the TAT secretion system in Mycobacterium tuberculosis.

Solans L, Gonzalo-Asensio J, Sala C, Benjak A, Uplekar S, Rougemont J, Guilhot C, Malaga W, Martín C, Cole ST.

PLoS Pathog. 2014 May 29;10(5):e1004183. doi: 10.1371/journal.ppat.1004183. eCollection 2014 May.

23.

Genome-wide re-sequencing of multidrug-resistant Mycobacterium leprae Airaku-3.

Singh P, Benjak A, Carat S, Kai M, Busso P, Avanzi C, Paniz-Mondolfi A, Peter C, Harshman K, Rougemont J, Matsuoka M, Cole ST.

Clin Microbiol Infect. 2014 Oct;20(10):O619-22. doi: 10.1111/1469-0691.12609. Epub 2014 Mar 29.

24.

Genome-wide comparison of medieval and modern Mycobacterium leprae.

Schuenemann VJ, Singh P, Mendum TA, Krause-Kyora B, Jäger G, Bos KI, Herbig A, Economou C, Benjak A, Busso P, Nebel A, Boldsen JL, Kjellström A, Wu H, Stewart GR, Taylor GM, Bauer P, Lee OY, Wu HH, Minnikin DE, Besra GS, Tucker K, Roffey S, Sow SO, Cole ST, Nieselt K, Krause J.

Science. 2013 Jul 12;341(6142):179-83. doi: 10.1126/science.1238286. Epub 2013 Jun 13.

25.

The genome of melon (Cucumis melo L.).

Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, González VM, Hénaff E, Câmara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutiérrez S, Blanca J, Cañizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodríguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorente-Galdos B, Melé M, Yang L, Weng Y, Navarro A, Marques-Bonet T, Aranda MA, Nuez F, Picó B, Gabaldón T, Roma G, Guigó R, Casacuberta JM, Arús P, Puigdomènech P.

Proc Natl Acad Sci U S A. 2012 Jul 17;109(29):11872-7. doi: 10.1073/pnas.1205415109. Epub 2012 Jul 2.

26.

Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin.

Rodríguez-Moreno L, González VM, Benjak A, Martí MC, Puigdomènech P, Aranda MA, Garcia-Mas J.

BMC Genomics. 2011 Aug 20;12:424. doi: 10.1186/1471-2164-12-424.

27.

Sequencing of 6.7 Mb of the melon genome using a BAC pooling strategy.

González VM, Benjak A, Hénaff EM, Mir G, Casacuberta JM, Garcia-Mas J, Puigdomènech P.

BMC Plant Biol. 2010 Nov 12;10:246. doi: 10.1186/1471-2229-10-246.

28.

Genome-wide BAC-end sequencing of Cucumis melo using two BAC libraries.

González VM, Rodríguez-Moreno L, Centeno E, Benjak A, Garcia-Mas J, Puigdomènech P, Aranda MA.

BMC Genomics. 2010 Nov 5;11:618. doi: 10.1186/1471-2164-11-618.

29.

Recent amplification and impact of MITEs on the genome of grapevine (Vitis vinifera L.).

Benjak A, Boué S, Forneck A, Casacuberta JM.

Genome Biol Evol. 2009 May 20;1:75-84. doi: 10.1093/gbe/evp009.

30.

Genome-wide analysis of the "cut-and-paste" transposons of grapevine.

Benjak A, Forneck A, Casacuberta JM.

PLoS One. 2008 Sep 3;3(9):e3107. doi: 10.1371/journal.pone.0003107.

31.

Nud1p, the yeast homolog of Centriolin, regulates spindle pole body inheritance in meiosis.

Gordon O, Taxis C, Keller PJ, Benjak A, Stelzer EH, Simchen G, Knop M.

EMBO J. 2006 Aug 23;25(16):3856-68. Epub 2006 Aug 3.

32.

GFP-golvesin constructs to study Golgi tubulation and post-Golgi vesicle dynamics in phagocytosis.

Gerisch G, Benjak A, Köhler J, Weber I, Schneider N.

Eur J Cell Biol. 2004 Jul;83(6):297-303.

PMID:
15511087
33.

Cytotoxic effects of diazenes on tumor cells in vitro.

Moskatelo D, Benjak A, Laketa V, Polanc S, Kosmrlj J, Osmak M.

Chemotherapy. 2002 Mar;48(1):36-41.

PMID:
11901255

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