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Items: 1 to 50 of 443

1.

Burr-Hole Evacuation of Chronic Subdural Hematoma: Biophysically and Evidence-Based Technique Improvement.

Májovský M, Netuka D, Beneš V, Kučera P.

J Neurosci Rural Pract. 2019 Jan-Mar;10(1):113-118. doi: 10.4103/jnrp.jnrp_167_18.

PMID:
30765981
2.

Fluctuating Light Interacts with Time of Day and Leaf Development Stage to Reprogram Gene Expression.

Schneider T, Bolger A, Zeier J, Preiskowski S, Benes V, Trenkamp S, Usadel B, Farre EM, Matsubara S.

Plant Physiol. 2019 Feb 4. pii: pp.01443.2018. doi: 10.1104/pp.18.01443. [Epub ahead of print]

PMID:
30718349
3.

Antibiotics-induced monodominance of a novel gut bacterial order.

Hildebrand F, Moitinho-Silva L, Blasche S, Jahn MT, Gossmann TI, Heuerta-Cepas J, Hercog R, Luetge M, Bahram M, Pryszlak A, Alves RJ, Waszak SM, Zhu A, Ye L, Costea PI, Aalvink S, Belzer C, Forslund SK, Sunagawa S, Hentschel U, Merten C, Patil KR, Benes V, Bork P.

Gut. 2019 Jan 18. pii: gutjnl-2018-317715. doi: 10.1136/gutjnl-2018-317715. [Epub ahead of print]

4.

Alfred: Interactive multi-sample BAM alignment statistics, feature counting and feature annotation for long- and short-read sequencing.

Rausch T, Fritz MH, Korbel JO, Benes V.

Bioinformatics. 2018 Dec 6. doi: 10.1093/bioinformatics/bty1007. [Epub ahead of print]

PMID:
30520945
5.

The Response of Three Southern Ocean Phytoplankton Species to Ocean Acidification and Light Availability: A Transcriptomic Study.

Beszteri S, Thoms S, Benes V, Harms L, Trimborn S.

Protist. 2018 Dec;169(6):958-975. doi: 10.1016/j.protis.2018.08.003. Epub 2018 Aug 27.

6.

Subdural empyema case report of a rare disease with a high mortality.

Dedeciusová M, Tyll T, Beneš V, Netuka D.

Rozhl Chir. 2018 Spring;97(6):279-285.

PMID:
30442008
7.

Epidural hematoma - benign or potentially malignant disease?

Svoboda N, Tyll T, Beneš V, Netuka D.

Rozhl Chir. 2018 Spring;97(6):267-272.

PMID:
30442006
8.

Erratum to: Transcriptional mapping of the primary somatosensory cortex upon sensory deprivation.

Kole K, Komuro Y, Provaznik J, Pistolic J, Benes V, Paul T, Celikel T.

Gigascience. 2018 Oct 1;7(10). doi: 10.1093/gigascience/giy040. No abstract available.

9.

Virome Analysis Reveals No Association of Head and Neck Vascular Anomalies with an Active Viral Infection.

Franke N, Bette M, Marquardt A, Briese T, Lipkin WI, Kurz C, Ehrenreich J, Mack E, Baying B, Beneš V, Rodepeter FR, Neff A, Teymoortash A, Eivazi B, Geisthoff U, Stuck BA, Bakowsky U, Mandic R.

In Vivo. 2018 Nov-Dec;32(6):1323-1331. doi: 10.21873/invivo.11382.

PMID:
30348684
10.

Domestic Fowl Breed Variation in Egg White Protein Expression: Application of Proteomics and Transcriptomics.

Bílková B, Świderská Z, Zita L, Laloë D, Charles M, Beneš V, Stopka P, Vinkler M.

J Agric Food Chem. 2018 Nov 7;66(44):11854-11863. doi: 10.1021/acs.jafc.8b03099. Epub 2018 Oct 23.

PMID:
30296079
11.

Olfactory function in patients after transsphenoidal surgery for pituitary adenomas-a short review.

Majovsky M, Astl J, Kovar D, Masopust V, Benes V, Netuka D.

Neurosurg Rev. 2018 Oct 1. doi: 10.1007/s10143-018-1034-1. [Epub ahead of print] Review.

PMID:
30276575
12.

JUNB, DUSP2, SGK1, SOCS1 and CREBBP are frequently mutated in T-cell/histiocyte-rich large B-cell lymphoma.

Schuhmacher B, Bein J, Rausch T, Benes V, Tousseyn T, Vornanen M, Ponzoni M, Thurner L, Gascoyne R, Steidl C, Küppers R, Hansmann ML, Hartmann S.

Haematologica. 2019 Feb;104(2):330-337. doi: 10.3324/haematol.2018.203224. Epub 2018 Sep 13.

13.

Carotid Endarterectomy and Carotid Artery Stenting in the Light of ICSS and CREST Studies.

Benes V, Bradac O.

Acta Neurochir Suppl. 2018;129:95-99. doi: 10.1007/978-3-319-73739-3_14.

PMID:
30171320
14.

Development, Function, and Clinical Significance of Plasmacytoid Dendritic Cells in Chronic Myeloid Leukemia.

Inselmann S, Wang Y, Saussele S, Fritz L, Schütz C, Huber M, Liebler S, Ernst T, Cai D, Botschek S, Brendel C, Calogero RA, Pavlinic D, Benes V, Liu ET, Neubauer A, Hochhaus A, Burchert A.

Cancer Res. 2018 Nov 1;78(21):6223-6234. doi: 10.1158/0008-5472.CAN-18-1477. Epub 2018 Aug 30.

PMID:
30166420
15.

MicroRNA miR-34a downregulates FOXP1 during DNA damage response to limit BCR signalling in chronic lymphocytic leukaemia B cells.

Cerna K, Oppelt J, Chochola V, Musilova K, Seda V, Pavlasova G, Radova L, Arigoni M, Calogero RA, Benes V, Trbusek M, Brychtova Y, Doubek M, Mayer J, Pospisilova S, Mraz M.

Leukemia. 2019 Feb;33(2):403-414. doi: 10.1038/s41375-018-0230-x. Epub 2018 Aug 15.

PMID:
30111844
16.

Signal transduction-dependent small regulatory RNA is involved in glutamate metabolism of the human pathogen Bordetella pertussis.

Keidel K, Amman F, Bibova I, Drzmisek J, Benes V, Hot D, Vecerek B.

RNA. 2018 Nov;24(11):1530-1541. doi: 10.1261/rna.067306.118. Epub 2018 Aug 10.

PMID:
30097543
17.

Metagenomic analysis of gut microbial communities from a Central Asian population.

Kushugulova A, Forslund SK, Costea PI, Kozhakhmetov S, Khassenbekova Z, Urazova M, Nurgozhin T, Zhumadilov Z, Benberin V, Driessen M, Hercog R, Voigt AY, Benes V, Kandels-Lewis S, Sunagawa S, Letunic I, Bork P.

BMJ Open. 2018 Jul 28;8(7):e021682. doi: 10.1136/bmjopen-2018-021682.

18.

Unbiased classification of mosquito blood cells by single-cell genomics and high-content imaging.

Severo MS, Landry JJM, Lindquist RL, Goosmann C, Brinkmann V, Collier P, Hauser AE, Benes V, Henriksson J, Teichmann SA, Levashina EA.

Proc Natl Acad Sci U S A. 2018 Aug 7;115(32):E7568-E7577. doi: 10.1073/pnas.1803062115. Epub 2018 Jul 23.

19.

ToTem: a tool for variant calling pipeline optimization.

Tom N, Tom O, Malcikova J, Pavlova S, Kubesova B, Rausch T, Kolarik M, Benes V, Bystry V, Pospisilova S.

BMC Bioinformatics. 2018 Jun 26;19(1):243. doi: 10.1186/s12859-018-2227-x.

20.

RNA-Sequencing from Low-Input Material in Multiple Myeloma for Application in Clinical Routine.

Seckinger A, Bähr-Ivacevic T, Benes V, Hose D.

Methods Mol Biol. 2018;1792:97-115. doi: 10.1007/978-1-4939-7865-6_7.

PMID:
29797254
21.

Application of denaturing capillary electrophoresis for the detection of prognostic mutations in isocitrate dehydrogenase 1 and isocitrate dehydrogenase 2 genes in brain tumors.

Benesova L, Belsanova B, Kramar F, Halkova T, Benes V, Minarik M.

J Sep Sci. 2018 Jul;41(13):2819-2827. doi: 10.1002/jssc.201701473. Epub 2018 Jun 14.

PMID:
29791066
22.

Adverse effects of Hif1a mutation and maternal diabetes on the offspring heart.

Cerychova R, Bohuslavova R, Papousek F, Sedmera D, Abaffy P, Benes V, Kolar F, Pavlinkova G.

Cardiovasc Diabetol. 2018 May 12;17(1):68. doi: 10.1186/s12933-018-0713-0.

23.

Two P1B-1-ATPases of Amanita strobiliformis With Distinct Properties in Cu/Ag Transport.

Beneš V, Leonhardt T, Sácký J, Kotrba P.

Front Microbiol. 2018 Apr 23;9:747. doi: 10.3389/fmicb.2018.00747. eCollection 2018.

24.

Introduction. Skull base meningioma treatment strategies.

McDermott MW, Ohata K, Benes V.

Neurosurg Focus. 2018 Apr;44(4):E1. doi: 10.3171/2018.1.FOCUS1843. No abstract available.

PMID:
29606055
25.

Single-cell transcriptomics reveals a new dynamical function of transcription factors during embryonic hematopoiesis.

Bergiers I, Andrews T, Vargel Bölükbaşı Ö, Buness A, Janosz E, Lopez-Anguita N, Ganter K, Kosim K, Celen C, Itır Perçin G, Collier P, Baying B, Benes V, Hemberg M, Lancrin C.

Elife. 2018 Mar 20;7. pii: e29312. doi: 10.7554/eLife.29312.

26.

Genomic comparison between members of the Salinibacteraceae family, and description of a new species of Salinibacter (Salinibacter altiplanensis sp. nov.) isolated from high altitude hypersaline environments of the Argentinian Altiplano.

Viver T, Orellana L, González-Torres P, Díaz S, Urdiain M, Farías ME, Benes V, Kaempfer P, Shahinpei A, Ali Amoozegar M, Amann R, Antón J, Konstantinidis KT, Rosselló-Móra R.

Syst Appl Microbiol. 2018 May;41(3):198-212. doi: 10.1016/j.syapm.2017.12.004. Epub 2018 Jan 31.

PMID:
29429564
27.

Whole-Body Single-Cell Sequencing Reveals Transcriptional Domains in the Annelid Larval Body.

Achim K, Eling N, Vergara HM, Bertucci PY, Musser J, Vopalensky P, Brunet T, Collier P, Benes V, Marioni JC, Arendt D.

Mol Biol Evol. 2018 May 1;35(5):1047-1062. doi: 10.1093/molbev/msx336.

28.

The molecular signature of AML with increased ALDH activity suggests a stem cell origin.

Blume R, Rempel E, Manta L, Saeed BR, Wang W, Raffel S, Ermakova O, Eckstein V, Benes V, Trumpp A, Ho AD, Lutz C.

Leuk Lymphoma. 2018 Sep;59(9):2201-2210. doi: 10.1080/10428194.2017.1422862. Epub 2018 Jan 16.

PMID:
29334844
29.

Coordinated expression and genetic polymorphisms in Grainyhead-like genes in human non-melanoma skin cancers.

Kikulska A, Rausch T, Krzywinska E, Pawlak M, Wilczynski B, Benes V, Rutkowski P, Wilanowski T.

BMC Cancer. 2018 Jan 4;18(1):23. doi: 10.1186/s12885-017-3943-8.

30.

Intramedullary ependymoma: long-term outcome after surgery.

Svoboda N, Bradac O, de Lacy P, Benes V.

Acta Neurochir (Wien). 2018 Mar;160(3):439-447. doi: 10.1007/s00701-017-3430-7. Epub 2017 Dec 26.

PMID:
29280009
31.

"Coil mainly" policy in management of intracranial ACoA aneurysms: single-centre experience with the systematic review of literature and meta-analysis.

Steklacova A, Bradac O, de Lacy P, Lacman J, Charvat F, Benes V.

Neurosurg Rev. 2018 Jul;41(3):825-839. doi: 10.1007/s10143-017-0932-y. Epub 2017 Nov 28. Review.

PMID:
29181806
32.

A cautionary tale of sense-antisense gene pairs: independent regulation despite inverse correlation of expression.

Goyal A, Fiškin E, Gutschner T, Polycarpou-Schwarz M, Groß M, Neugebauer J, Gandhi M, Caudron-Herger M, Benes V, Diederichs S.

Nucleic Acids Res. 2017 Dec 1;45(21):12496-12508. doi: 10.1093/nar/gkx952.

33.

Combined Methylome and Transcriptome Analysis During Rat Hepatic Stellate Cell Activation.

Schumacher EC, Götze S, Kordes C, Benes V, Häussinger D.

Stem Cells Dev. 2017 Dec 15;26(24):1759-1770. doi: 10.1089/scd.2017.0128. Epub 2017 Nov 28.

PMID:
29054136
34.

Transcriptional mapping of the primary somatosensory cortex upon sensory deprivation.

Kole K, Komuro Y, Provaznik J, Pistolic J, Benes V, Tiesinga P, Celikel T.

Gigascience. 2017 Oct 1;6(10):1-6. doi: 10.1093/gigascience/gix081. Erratum in: Gigascience. 2018 Oct 1;7(10):.

35.

mRNA 3' uridylation and poly(A) tail length sculpt the mammalian maternal transcriptome.

Morgan M, Much C, DiGiacomo M, Azzi C, Ivanova I, Vitsios DM, Pistolic J, Collier P, Moreira PN, Benes V, Enright AJ, O'Carroll D.

Nature. 2017 Aug 17;548(7667):347-351. doi: 10.1038/nature23318. Epub 2017 Aug 9.

36.

Treatment of atlanto-axial subluxation secondary to rheumatoid arthritis by short segment stabilization with polyaxial screws.

Vanek P, Bradac O, de Lacy P, Pavelka K, Votavova M, Benes V.

Acta Neurochir (Wien). 2017 Sep;159(9):1791-1801. doi: 10.1007/s00701-017-3274-1. Epub 2017 Jul 27.

PMID:
28752203
37.

Characterization of Two Historic Smallpox Specimens from a Czech Museum.

Pajer P, Dresler J, Kabíckova H, Písa L, Aganov P, Fucik K, Elleder D, Hron T, Kuzelka V, Velemínsky P, Klimentova J, Fucikova A, Pejchal J, Hrabakova R, Benes V, Rausch T, Dundr P, Pilin A, Cabala R, Hubalek M, Stríbrny J, Antwerpen MH, Meyer H.

Viruses. 2017 Jul 27;9(8). pii: E200. doi: 10.3390/v9080200.

38.

Is surgery for pineal cysts safe and effective? Short review.

Májovský M, Netuka D, Beneš V.

Neurosurg Rev. 2018 Jan;41(1):119-124. doi: 10.1007/s10143-017-0876-2. Epub 2017 Jul 12. Review.

PMID:
28702847
39.

Distribution, Community Composition, and Potential Metabolic Activity of Bacterioplankton in an Urbanized Mediterranean Sea Coastal Zone.

Richa K, Balestra C, Piredda R, Benes V, Borra M, Passarelli A, Margiotta F, Saggiomo M, Biffali E, Sanges R, Scanlan DJ, Casotti R.

Appl Environ Microbiol. 2017 Aug 17;83(17). pii: e00494-17. doi: 10.1128/AEM.00494-17. Print 2017 Sep 1.

40.

Conservative and Surgical Treatment of Patients with Pineal Cysts: Prospective Case Series of 110 Patients.

Májovský M, Netuka D, Beneš V.

World Neurosurg. 2017 Sep;105:199-205. doi: 10.1016/j.wneu.2017.05.155. Epub 2017 Jun 2.

PMID:
28583453
41.

Thymic epithelial cells require p53 to support their long-term function in thymopoiesis in mice.

Rodrigues PM, Ribeiro AR, Perrod C, Landry JJM, Araújo L, Pereira-Castro I, Benes V, Moreira A, Xavier-Ferreira H, Meireles C, Alves NL.

Blood. 2017 Jul 27;130(4):478-488. doi: 10.1182/blood-2016-12-758961. Epub 2017 May 30.

42.

Single-Virus Droplet Microfluidics for High-Throughput Screening of Neutralizing Epitopes on HIV Particles.

Chaipan C, Pryszlak A, Dean H, Poignard P, Benes V, Griffiths AD, Merten CA.

Cell Chem Biol. 2017 Jun 22;24(6):751-757.e3. doi: 10.1016/j.chembiol.2017.05.009. Epub 2017 May 25.

43.

Potential protective role of Grainyhead-like genes in the development of clear cell renal cell carcinoma.

Pawlak M, Kikulska A, Wrzesinski T, Rausch T, Kwias Z, Wilczynski B, Benes V, Wesoly J, Wilanowski T.

Mol Carcinog. 2017 Nov;56(11):2414-2423. doi: 10.1002/mc.22682. Epub 2017 Jun 15.

PMID:
28543713
44.

Vitamin A-Retinoic Acid Signaling Regulates Hematopoietic Stem Cell Dormancy.

Cabezas-Wallscheid N, Buettner F, Sommerkamp P, Klimmeck D, Ladel L, Thalheimer FB, Pastor-Flores D, Roma LP, Renders S, Zeisberger P, Przybylla A, Schönberger K, Scognamiglio R, Altamura S, Florian CM, Fawaz M, Vonficht D, Tesio M, Collier P, Pavlinic D, Geiger H, Schroeder T, Benes V, Dick TP, Rieger MA, Stegle O, Trumpp A.

Cell. 2017 May 18;169(5):807-823.e19. doi: 10.1016/j.cell.2017.04.018. Epub 2017 May 4.

45.

E-WIN Project 2016: Evaluating the Current Gender Situation in Neurosurgery Across Europe-An Interactive, Multiple-Level Survey.

Steklacova A, Bradac O, de Lacy P, Benes V.

World Neurosurg. 2017 Aug;104:48-60. doi: 10.1016/j.wneu.2017.04.094. Epub 2017 Apr 26.

PMID:
28456744
46.

Accuracy of VarioGuide Frameless Stereotactic System Against Frame-Based Stereotaxy: Prospective, Randomized, Single-Center Study.

Bradac O, Steklacova A, Nebrenska K, Vrana J, de Lacy P, Benes V.

World Neurosurg. 2017 Aug;104:831-840. doi: 10.1016/j.wneu.2017.04.104. Epub 2017 Apr 25.

PMID:
28454992
47.

Genotypes of SLC22A4 and SLC22A5 regulatory loci are predictive of the response of chronic myeloid leukemia patients to imatinib treatment.

Jaruskova M, Curik N, Hercog R, Polivkova V, Motlova E, Benes V, Klamova H, Pecherkova P, Belohlavkova P, Vrbacky F, Machova Polakova K.

J Exp Clin Cancer Res. 2017 Apr 18;36(1):55. doi: 10.1186/s13046-017-0523-3.

48.

3' Uridylation controls mature microRNA turnover during CD4 T-cell activation.

Gutiérrez-Vázquez C, Enright AJ, Rodríguez-Galán A, Pérez-García A, Collier P, Jones MR, Benes V, Mizgerd JP, Mittelbrunn M, Ramiro AR, Sánchez-Madrid F.

RNA. 2017 Jun;23(6):882-891. doi: 10.1261/rna.060095.116. Epub 2017 Mar 28.

49.

Melatonin and cortisol secretion profile in patients with pineal cyst before and after pineal cyst resection.

Májovský M, Řezáčová L, Sumová A, Pospíšilová L, Netuka D, Bradáč O, Beneš V.

J Clin Neurosci. 2017 May;39:155-163. doi: 10.1016/j.jocn.2017.01.022. Epub 2017 Feb 10.

PMID:
28209308
50.

Identification of a genetically defined ultra-high-risk group in relapsed pediatric T-lymphoblastic leukemia.

Richter-Pechańska P, Kunz JB, Hof J, Zimmermann M, Rausch T, Bandapalli OR, Orlova E, Scapinello G, Sagi JC, Stanulla M, Schrappe M, Cario G, Kirschner-Schwabe R, Eckert C, Benes V, Korbel JO, Muckenthaler MU, Kulozik AE.

Blood Cancer J. 2017 Feb 3;7(2):e523. doi: 10.1038/bcj.2017.3.

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