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Items: 1 to 50 of 459

1.

Nuclear factor of activated T-cells, NFATC1, governs FLT3ITD-driven hematopoietic stem cell transformation and a poor prognosis in AML.

Solovey M, Wang Y, Michel C, Metzeler KH, Herold T, Göthert JR, Ellenrieder V, Hessmann E, Gattenlöhner S, Neubauer A, Pavlinic D, Benes V, Rupp O, Burchert A.

J Hematol Oncol. 2019 Jul 8;12(1):72. doi: 10.1186/s13045-019-0765-y.

2.

BRD4 bimodal binding at promoters and drug-induced displacement at Pol II pause sites associates with I-BET sensitivity.

Khoueiry P, Ward Gahlawat A, Petretich M, Michon AM, Simola D, Lam E, Furlong EE, Benes V, Dawson MA, Prinjha RK, Drewes G, Grandi P.

Epigenetics Chromatin. 2019 Jul 2;12(1):39. doi: 10.1186/s13072-019-0286-5.

3.

Surgery of acute occlusion of the extracranial internal carotid artery - a meta-analysis.

Beneš V 3rd, Bradáč O, Horváth D, Suchomel P, Beneš V Jr.

Vasa. 2019 Jun 18:1-11. doi: 10.1024/0301-1526/a000801. [Epub ahead of print]

PMID:
31210589
4.

Small-molecule-mediated chemical knock-down of MuRF1/MuRF2 and attenuation of diaphragm dysfunction in chronic heart failure.

Adams V, Bowen TS, Werner S, Barthel P, Amberger C, Konzer A, Graumann J, Sehr P, Lewis J, Provaznik J, Benes V, Büttner P, Gasch A, Mangner N, Witt CC, Labeit D, Linke A, Labeit S.

J Cachexia Sarcopenia Muscle. 2019 May 29. doi: 10.1002/jcsm.12448. [Epub ahead of print]

5.

Olfactory Results of Endoscopic Endonasal Surgery for Pituitary Adenoma: A Prospective Study of 143 Patients.

Netuka D, Masopust V, Fundová P, Astl J, Školoudík D, Májovský M, Beneš V.

World Neurosurg. 2019 May 17. pii: S1878-8750(19)31335-X. doi: 10.1016/j.wneu.2019.05.061. [Epub ahead of print]

PMID:
31103759
6.

The legacy of sexual ancestors in phenotypic variability, gene expression and homoeolog regulation of asexual hybrids and polyploids.

Bartoš O, Röslein J, Kotusz J, Paces J, Pekárik L, Petrtýl M, Halačka K, Štefková Kašparová E, Mendel J, Boroń A, Juchno D, Leska A, Jablonska O, Benes V, Šídová M, Janko K.

Mol Biol Evol. 2019 May 11. pii: msz114. doi: 10.1093/molbev/msz114. [Epub ahead of print]

PMID:
31077330
7.

Fatal intracranial aneurysm rupture after thrombolytic treatment for ischemic stroke: a case report and literature review.

Beneš V 3rd, Jurák L, Jedlička J, Dienelt J, Suchomel P.

Acta Neurochir (Wien). 2019 Jul;161(7):1337-1341. doi: 10.1007/s00701-019-03931-3. Epub 2019 May 7.

PMID:
31065893
8.

Reconstruction of Grains in Polycrystalline Materials From Incomplete Data Using Laguerre Tessellations.

Petrich L, Staněk J, Wang M, Westhoff D, Heller L, Šittner P, Krill CE, Beneš V, Schmidt V.

Microsc Microanal. 2019 Jun;25(3):743-752. doi: 10.1017/S1431927619000485. Epub 2019 Apr 30.

PMID:
31038096
9.

Publisher Correction: Mitochondrial protein-induced stress triggers a global adaptive transcriptional programme.

Boos F, Krämer L, Groh C, Jung F, Haberkant P, Stein F, Wollweber F, Gackstatter A, Zöller E, van der Laan M, Savitski MM, Benes V, Herrmann JM.

Nat Cell Biol. 2019 Jun;21(6):793-794. doi: 10.1038/s41556-019-0326-1.

PMID:
31036940
10.

GemC1 governs multiciliogenesis through direct interaction with and transcriptional regulation of p73.

Lalioti ME, Arbi M, Loukas I, Kaplani K, Kalogeropoulou A, Lokka G, Kyrousi C, Mizi A, Georgomanolis T, Josipovic N, Gkikas D, Benes V, Politis PK, Papantonis A, Lygerou Z, Taraviras S.

J Cell Sci. 2019 Jun 3;132(11). pii: jcs228684. doi: 10.1242/jcs.228684.

PMID:
31028178
11.

Successful Management of a Giant Anterior Sacral Meningocele Associated with Low-Dysplastic Spondylolisthesis from a Single Posterior Approach: Case Report.

Vanek P, Benes V.

World Neurosurg. 2019 Apr 19. pii: S1878-8750(19)31099-X. doi: 10.1016/j.wneu.2019.04.105. [Epub ahead of print]

PMID:
31009790
12.

Aspirin impairs acetyl-coenzyme A metabolism in redox-compromised yeast cells.

Farrugia G, Azzopardi M, Saliba C, Grech G, Gross AS, Pistolic J, Benes V, Vassallo N, Borg J, Madeo F, Eisenberg T, Balzan R.

Sci Rep. 2019 Apr 16;9(1):6152. doi: 10.1038/s41598-019-39489-4.

13.

Aire-expressing ILC3-like cells in the lymph node display potent APC features.

Yamano T, Dobeš J, Vobořil M, Steinert M, Brabec T, Ziętara N, Dobešová M, Ohnmacht C, Laan M, Peterson P, Benes V, Sedláček R, Hanayama R, Kolář M, Klein L, Filipp D.

J Exp Med. 2019 May 6;216(5):1027-1037. doi: 10.1084/jem.20181430. Epub 2019 Mar 27.

PMID:
30918005
14.

Mitochondrial protein-induced stress triggers a global adaptive transcriptional programme.

Boos F, Krämer L, Groh C, Jung F, Haberkant P, Stein F, Wollweber F, Gackstatter A, Zöller E, van der Laan M, Savitski MM, Benes V, Herrmann JM.

Nat Cell Biol. 2019 Apr;21(4):442-451. doi: 10.1038/s41556-019-0294-5. Epub 2019 Mar 18. Erratum in: Nat Cell Biol. 2019 Jun;21(6):793-794.

PMID:
30886345
15.

MicroRNAs from saliva of anopheline mosquitoes mimic human endogenous miRNAs and may contribute to vector-host-pathogen interactions.

Arcà B, Colantoni A, Fiorillo C, Severini F, Benes V, Di Luca M, Calogero RA, Lombardo F.

Sci Rep. 2019 Feb 27;9(1):2955. doi: 10.1038/s41598-019-39880-1.

16.

Different cadmium tolerance of two isolates of Hebeloma mesophaeum showing different basal expression levels of metallothionein (HmMT3) gene.

Sácký J, Beneš V, Borovička J, Leonhardt T, Kotrba P.

Fungal Biol. 2019 Mar;123(3):247-254. doi: 10.1016/j.funbio.2018.12.006. Epub 2018 Dec 27.

PMID:
30798880
17.

Burr-Hole Evacuation of Chronic Subdural Hematoma: Biophysically and Evidence-Based Technique Improvement.

Májovský M, Netuka D, Beneš V, Kučera P.

J Neurosci Rural Pract. 2019 Jan-Mar;10(1):113-118. doi: 10.4103/jnrp.jnrp_167_18.

18.

Fluctuating Light Interacts with Time of Day and Leaf Development Stage to Reprogram Gene Expression.

Schneider T, Bolger A, Zeier J, Preiskowski S, Benes V, Trenkamp S, Usadel B, Farré EM, Matsubara S.

Plant Physiol. 2019 Apr;179(4):1632-1657. doi: 10.1104/pp.18.01443. Epub 2019 Feb 4.

PMID:
30718349
19.

Antibiotics-induced monodominance of a novel gut bacterial order.

Hildebrand F, Moitinho-Silva L, Blasche S, Jahn MT, Gossmann TI, Heuerta-Cepas J, Hercog R, Luetge M, Bahram M, Pryszlak A, Alves RJ, Waszak SM, Zhu A, Ye L, Costea PI, Aalvink S, Belzer C, Forslund SK, Sunagawa S, Hentschel U, Merten C, Patil KR, Benes V, Bork P.

Gut. 2019 Jan 18. pii: gutjnl-2018-317715. doi: 10.1136/gutjnl-2018-317715. [Epub ahead of print]

20.

Alfred: Interactive multi-sample BAM alignment statistics, feature counting and feature annotation for long- and short-read sequencing.

Rausch T, Fritz MH, Korbel JO, Benes V.

Bioinformatics. 2018 Dec 6. doi: 10.1093/bioinformatics/bty1007. [Epub ahead of print]

21.

The Response of Three Southern Ocean Phytoplankton Species to Ocean Acidification and Light Availability: A Transcriptomic Study.

Beszteri S, Thoms S, Benes V, Harms L, Trimborn S.

Protist. 2018 Dec;169(6):958-975. doi: 10.1016/j.protis.2018.08.003. Epub 2018 Aug 27.

22.

Subdural empyema case report of a rare disease with a high mortality.

Dedeciusová M, Tyll T, Beneš V, Netuka D.

Rozhl Chir. Spring 2018;97(6):279-285.

PMID:
30442008
23.

Epidural hematoma - benign or potentially malignant disease?

Svoboda N, Tyll T, Beneš V, Netuka D.

Rozhl Chir. Spring 2018;97(6):267-272.

PMID:
30442006
24.

Erratum to: Transcriptional mapping of the primary somatosensory cortex upon sensory deprivation.

Kole K, Komuro Y, Provaznik J, Pistolic J, Benes V, Paul T, Celikel T.

Gigascience. 2018 Oct 1;7(10). doi: 10.1093/gigascience/giy040. No abstract available.

25.

Virome Analysis Reveals No Association of Head and Neck Vascular Anomalies with an Active Viral Infection.

Franke N, Bette M, Marquardt A, Briese T, Lipkin WI, Kurz C, Ehrenreich J, Mack E, Baying B, Beneš V, Rodepeter FR, Neff A, Teymoortash A, Eivazi B, Geisthoff U, Stuck BA, Bakowsky U, Mandic R.

In Vivo. 2018 Nov-Dec;32(6):1323-1331. doi: 10.21873/invivo.11382.

26.

Domestic Fowl Breed Variation in Egg White Protein Expression: Application of Proteomics and Transcriptomics.

Bílková B, Świderská Z, Zita L, Laloë D, Charles M, Beneš V, Stopka P, Vinkler M.

J Agric Food Chem. 2018 Nov 7;66(44):11854-11863. doi: 10.1021/acs.jafc.8b03099. Epub 2018 Oct 23.

PMID:
30296079
27.

Olfactory function in patients after transsphenoidal surgery for pituitary adenomas-a short review.

Majovsky M, Astl J, Kovar D, Masopust V, Benes V, Netuka D.

Neurosurg Rev. 2019 Jun;42(2):395-401. doi: 10.1007/s10143-018-1034-1. Epub 2018 Oct 1. Review.

PMID:
30276575
28.

JUNB, DUSP2, SGK1, SOCS1 and CREBBP are frequently mutated in T-cell/histiocyte-rich large B-cell lymphoma.

Schuhmacher B, Bein J, Rausch T, Benes V, Tousseyn T, Vornanen M, Ponzoni M, Thurner L, Gascoyne R, Steidl C, Küppers R, Hansmann ML, Hartmann S.

Haematologica. 2019 Feb;104(2):330-337. doi: 10.3324/haematol.2018.203224. Epub 2018 Sep 13.

29.

Carotid Endarterectomy and Carotid Artery Stenting in the Light of ICSS and CREST Studies.

Benes V, Bradac O.

Acta Neurochir Suppl. 2018;129:95-99. doi: 10.1007/978-3-319-73739-3_14.

PMID:
30171320
30.

Development, Function, and Clinical Significance of Plasmacytoid Dendritic Cells in Chronic Myeloid Leukemia.

Inselmann S, Wang Y, Saussele S, Fritz L, Schütz C, Huber M, Liebler S, Ernst T, Cai D, Botschek S, Brendel C, Calogero RA, Pavlinic D, Benes V, Liu ET, Neubauer A, Hochhaus A, Burchert A.

Cancer Res. 2018 Nov 1;78(21):6223-6234. doi: 10.1158/0008-5472.CAN-18-1477. Epub 2018 Aug 30.

PMID:
30166420
31.

MicroRNA miR-34a downregulates FOXP1 during DNA damage response to limit BCR signalling in chronic lymphocytic leukaemia B cells.

Cerna K, Oppelt J, Chochola V, Musilova K, Seda V, Pavlasova G, Radova L, Arigoni M, Calogero RA, Benes V, Trbusek M, Brychtova Y, Doubek M, Mayer J, Pospisilova S, Mraz M.

Leukemia. 2019 Feb;33(2):403-414. doi: 10.1038/s41375-018-0230-x. Epub 2018 Aug 15.

PMID:
30111844
32.

Signal transduction-dependent small regulatory RNA is involved in glutamate metabolism of the human pathogen Bordetella pertussis.

Keidel K, Amman F, Bibova I, Drzmisek J, Benes V, Hot D, Vecerek B.

RNA. 2018 Nov;24(11):1530-1541. doi: 10.1261/rna.067306.118. Epub 2018 Aug 10.

PMID:
30097543
33.

Metagenomic analysis of gut microbial communities from a Central Asian population.

Kushugulova A, Forslund SK, Costea PI, Kozhakhmetov S, Khassenbekova Z, Urazova M, Nurgozhin T, Zhumadilov Z, Benberin V, Driessen M, Hercog R, Voigt AY, Benes V, Kandels-Lewis S, Sunagawa S, Letunic I, Bork P.

BMJ Open. 2018 Jul 28;8(7):e021682. doi: 10.1136/bmjopen-2018-021682.

34.

Unbiased classification of mosquito blood cells by single-cell genomics and high-content imaging.

Severo MS, Landry JJM, Lindquist RL, Goosmann C, Brinkmann V, Collier P, Hauser AE, Benes V, Henriksson J, Teichmann SA, Levashina EA.

Proc Natl Acad Sci U S A. 2018 Aug 7;115(32):E7568-E7577. doi: 10.1073/pnas.1803062115. Epub 2018 Jul 23.

35.

ToTem: a tool for variant calling pipeline optimization.

Tom N, Tom O, Malcikova J, Pavlova S, Kubesova B, Rausch T, Kolarik M, Benes V, Bystry V, Pospisilova S.

BMC Bioinformatics. 2018 Jun 26;19(1):243. doi: 10.1186/s12859-018-2227-x.

36.

RNA-Sequencing from Low-Input Material in Multiple Myeloma for Application in Clinical Routine.

Seckinger A, Bähr-Ivacevic T, Benes V, Hose D.

Methods Mol Biol. 2018;1792:97-115. doi: 10.1007/978-1-4939-7865-6_7.

PMID:
29797254
37.

Application of denaturing capillary electrophoresis for the detection of prognostic mutations in isocitrate dehydrogenase 1 and isocitrate dehydrogenase 2 genes in brain tumors.

Benesova L, Belsanova B, Kramar F, Halkova T, Benes V, Minarik M.

J Sep Sci. 2018 Jul;41(13):2819-2827. doi: 10.1002/jssc.201701473. Epub 2018 Jun 14.

PMID:
29791066
38.

Adverse effects of Hif1a mutation and maternal diabetes on the offspring heart.

Cerychova R, Bohuslavova R, Papousek F, Sedmera D, Abaffy P, Benes V, Kolar F, Pavlinkova G.

Cardiovasc Diabetol. 2018 May 12;17(1):68. doi: 10.1186/s12933-018-0713-0.

39.

Two P1B-1-ATPases of Amanita strobiliformis With Distinct Properties in Cu/Ag Transport.

Beneš V, Leonhardt T, Sácký J, Kotrba P.

Front Microbiol. 2018 Apr 23;9:747. doi: 10.3389/fmicb.2018.00747. eCollection 2018.

40.

Introduction. Skull base meningioma treatment strategies.

McDermott MW, Ohata K, Benes V.

Neurosurg Focus. 2018 Apr;44(4):E1. doi: 10.3171/2018.1.FOCUS1843. No abstract available.

PMID:
29606055
41.

Single-cell transcriptomics reveals a new dynamical function of transcription factors during embryonic hematopoiesis.

Bergiers I, Andrews T, Vargel Bölükbaşı Ö, Buness A, Janosz E, Lopez-Anguita N, Ganter K, Kosim K, Celen C, Itır Perçin G, Collier P, Baying B, Benes V, Hemberg M, Lancrin C.

Elife. 2018 Mar 20;7. pii: e29312. doi: 10.7554/eLife.29312.

42.

Genomic comparison between members of the Salinibacteraceae family, and description of a new species of Salinibacter (Salinibacter altiplanensis sp. nov.) isolated from high altitude hypersaline environments of the Argentinian Altiplano.

Viver T, Orellana L, González-Torres P, Díaz S, Urdiain M, Farías ME, Benes V, Kaempfer P, Shahinpei A, Ali Amoozegar M, Amann R, Antón J, Konstantinidis KT, Rosselló-Móra R.

Syst Appl Microbiol. 2018 May;41(3):198-212. doi: 10.1016/j.syapm.2017.12.004. Epub 2018 Jan 31.

PMID:
29429564
43.

Whole-Body Single-Cell Sequencing Reveals Transcriptional Domains in the Annelid Larval Body.

Achim K, Eling N, Vergara HM, Bertucci PY, Musser J, Vopalensky P, Brunet T, Collier P, Benes V, Marioni JC, Arendt D.

Mol Biol Evol. 2018 May 1;35(5):1047-1062. doi: 10.1093/molbev/msx336.

44.

The molecular signature of AML with increased ALDH activity suggests a stem cell origin.

Blume R, Rempel E, Manta L, Saeed BR, Wang W, Raffel S, Ermakova O, Eckstein V, Benes V, Trumpp A, Ho AD, Lutz C.

Leuk Lymphoma. 2018 Sep;59(9):2201-2210. doi: 10.1080/10428194.2017.1422862. Epub 2018 Jan 16.

PMID:
29334844
45.

Coordinated expression and genetic polymorphisms in Grainyhead-like genes in human non-melanoma skin cancers.

Kikulska A, Rausch T, Krzywinska E, Pawlak M, Wilczynski B, Benes V, Rutkowski P, Wilanowski T.

BMC Cancer. 2018 Jan 4;18(1):23. doi: 10.1186/s12885-017-3943-8.

46.

Intramedullary ependymoma: long-term outcome after surgery.

Svoboda N, Bradac O, de Lacy P, Benes V.

Acta Neurochir (Wien). 2018 Mar;160(3):439-447. doi: 10.1007/s00701-017-3430-7. Epub 2017 Dec 26. Review.

PMID:
29280009
47.

"Coil mainly" policy in management of intracranial ACoA aneurysms: single-centre experience with the systematic review of literature and meta-analysis.

Steklacova A, Bradac O, de Lacy P, Lacman J, Charvat F, Benes V.

Neurosurg Rev. 2018 Jul;41(3):825-839. doi: 10.1007/s10143-017-0932-y. Epub 2017 Nov 28. Review.

PMID:
29181806
48.

A cautionary tale of sense-antisense gene pairs: independent regulation despite inverse correlation of expression.

Goyal A, Fiškin E, Gutschner T, Polycarpou-Schwarz M, Groß M, Neugebauer J, Gandhi M, Caudron-Herger M, Benes V, Diederichs S.

Nucleic Acids Res. 2017 Dec 1;45(21):12496-12508. doi: 10.1093/nar/gkx952.

49.

Combined Methylome and Transcriptome Analysis During Rat Hepatic Stellate Cell Activation.

Schumacher EC, Götze S, Kordes C, Benes V, Häussinger D.

Stem Cells Dev. 2017 Dec 15;26(24):1759-1770. doi: 10.1089/scd.2017.0128. Epub 2017 Nov 28.

PMID:
29054136
50.

Transcriptional mapping of the primary somatosensory cortex upon sensory deprivation.

Kole K, Komuro Y, Provaznik J, Pistolic J, Benes V, Tiesinga P, Celikel T.

Gigascience. 2017 Oct 1;6(10):1-6. doi: 10.1093/gigascience/gix081. Erratum in: Gigascience. 2018 Oct 1;7(10):.

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