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Items: 29

1.

Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe.

Frantz LAF, Haile J, Lin AT, Scheu A, Geörg C, Benecke N, Alexander M, Linderholm A, Mullin VE, Daly KG, Battista VM, Price M, Gron KJ, Alexandri P, Arbogast RM, Arbuckle B, Bӑlӑşescu A, Barnett R, Bartosiewicz L, Baryshnikov G, Bonsall C, Borić D, Boroneanţ A, Bulatović J, Çakirlar C, Carretero JM, Chapman J, Church M, Crooijmans R, De Cupere B, Detry C, Dimitrijevic V, Dumitraşcu V, du Plessis L, Edwards CJ, Erek CM, Erim-Özdoğan A, Ervynck A, Fulgione D, Gligor M, Götherström A, Gourichon L, Groenen MAM, Helmer D, Hongo H, Horwitz LK, Irving-Pease EK, Lebrasseur O, Lesur J, Malone C, Manaseryan N, Marciniak A, Martlew H, Mashkour M, Matthews R, Matuzeviciute GM, Maziar S, Meijaard E, McGovern T, Megens HJ, Miller R, Mohaseb AF, Orschiedt J, Orton D, Papathanasiou A, Pearson MP, Pinhasi R, Radmanović D, Ricaut FX, Richards M, Sabin R, Sarti L, Schier W, Sheikhi S, Stephan E, Stewart JR, Stoddart S, Tagliacozzo A, Tasić N, Trantalidou K, Tresset A, Valdiosera C, van den Hurk Y, Van Poucke S, Vigne JD, Yanevich A, Zeeb-Lanz A, Triantafyllidis A, Gilbert MTP, Schibler J, Rowley-Conwy P, Zeder M, Peters J, Cucchi T, Bradley DG, Dobney K, Burger J, Evin A, Girdland-Flink L, Larson G.

Proc Natl Acad Sci U S A. 2019 Aug 12. pii: 201901169. doi: 10.1073/pnas.1901169116. [Epub ahead of print]

2.

Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent.

Verdugo MP, Mullin VE, Scheu A, Mattiangeli V, Daly KG, Maisano Delser P, Hare AJ, Burger J, Collins MJ, Kehati R, Hesse P, Fulton D, Sauer EW, Mohaseb FA, Davoudi H, Khazaeli R, Lhuillier J, Rapin C, Ebrahimi S, Khasanov M, Vahidi SMF, MacHugh DE, Ertuğrul O, Koukouli-Chrysanthaki C, Sampson A, Kazantzis G, Kontopoulos I, Bulatovic J, Stojanović I, Mikdad A, Benecke N, Linstädter J, Sablin M, Bendrey R, Gourichon L, Arbuckle BS, Mashkour M, Orton D, Horwitz LK, Teasdale MD, Bradley DG.

Science. 2019 Jul 12;365(6449):173-176. doi: 10.1126/science.aav1002.

PMID:
31296769
3.

Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series.

Fages A, Hanghøj K, Khan N, Gaunitz C, Seguin-Orlando A, Leonardi M, McCrory Constantz C, Gamba C, Al-Rasheid KAS, Albizuri S, Alfarhan AH, Allentoft M, Alquraishi S, Anthony D, Baimukhanov N, Barrett JH, Bayarsaikhan J, Benecke N, Bernáldez-Sánchez E, Berrocal-Rangel L, Biglari F, Boessenkool S, Boldgiv B, Brem G, Brown D, Burger J, Crubézy E, Daugnora L, Davoudi H, de Barros Damgaard P, de Los Ángeles de Chorro Y de Villa-Ceballos M, Deschler-Erb S, Detry C, Dill N, do Mar Oom M, Dohr A, Ellingvåg S, Erdenebaatar D, Fathi H, Felkel S, Fernández-Rodríguez C, García-Viñas E, Germonpré M, Granado JD, Hallsson JH, Hemmer H, Hofreiter M, Kasparov A, Khasanov M, Khazaeli R, Kosintsev P, Kristiansen K, Kubatbek T, Kuderna L, Kuznetsov P, Laleh H, Leonard JA, Lhuillier J, Liesau von Lettow-Vorbeck C, Logvin A, Lõugas L, Ludwig A, Luis C, Arruda AM, Marques-Bonet T, Matoso Silva R, Merz V, Mijiddorj E, Miller BK, Monchalov O, Mohaseb FA, Morales A, Nieto-Espinet A, Nistelberger H, Onar V, Pálsdóttir AH, Pitulko V, Pitskhelauri K, Pruvost M, Rajic Sikanjic P, Rapan Papeša A, Roslyakova N, Sardari A, Sauer E, Schafberg R, Scheu A, Schibler J, Schlumbaum A, Serrand N, Serres-Armero A, Shapiro B, Sheikhi Seno S, Shevnina I, Shidrang S, Southon J, Star B, Sykes N, Taheri K, Taylor W, Teegen WR, Trbojević Vukičević T, Trixl S, Tumen D, Undrakhbold S, Usmanova E, Vahdati A, Valenzuela-Lamas S, Viegas C, Wallner B, Weinstock J, Zaibert V, Clavel B, Lepetz S, Mashkour M, Helgason A, Stefánsson K, Barrey E, Willerslev E, Outram AK, Librado P, Orlando L.

Cell. 2019 May 30;177(6):1419-1435.e31. doi: 10.1016/j.cell.2019.03.049. Epub 2019 May 2.

4.

Dietary inferences through stable isotope analysis at the Neolithic and Bronze Age in the southern Caucasus (sixth to first millenium BC, Azerbaijan): From environmental adaptation to social impacts.

Herrscher E, Poulmarc'h M, Pecqueur L, Jovenet E, Benecke N, Decaix A, Lyonnet B, Guliyev F, André G.

Am J Phys Anthropol. 2018 Dec;167(4):856-875. doi: 10.1002/ajpa.23718. Epub 2018 Oct 23.

PMID:
30351449
5.

Ancient goat genomes reveal mosaic domestication in the Fertile Crescent.

Daly KG, Maisano Delser P, Mullin VE, Scheu A, Mattiangeli V, Teasdale MD, Hare AJ, Burger J, Verdugo MP, Collins MJ, Kehati R, Erek CM, Bar-Oz G, Pompanon F, Cumer T, Çakırlar C, Mohaseb AF, Decruyenaere D, Davoudi H, Çevik Ö, Rollefson G, Vigne JD, Khazaeli R, Fathi H, Doost SB, Rahimi Sorkhani R, Vahdati AA, Sauer EW, Azizi Kharanaghi H, Maziar S, Gasparian B, Pinhasi R, Martin L, Orton D, Arbuckle BS, Benecke N, Manica A, Horwitz LK, Mashkour M, Bradley DG.

Science. 2018 Jul 6;361(6397):85-88. doi: 10.1126/science.aas9411.

PMID:
29976826
6.

Decline of genetic diversity in ancient domestic stallions in Europe.

Wutke S, Sandoval-Castellanos E, Benecke N, Döhle HJ, Friederich S, Gonzalez J, Hofreiter M, Lõugas L, Magnell O, Malaspinas AS, Morales-Muñiz A, Orlando L, Reissmann M, Trinks A, Ludwig A.

Sci Adv. 2018 Apr 18;4(4):eaap9691. doi: 10.1126/sciadv.aap9691. eCollection 2018 Apr.

7.

Ancient genomes revisit the ancestry of domestic and Przewalski's horses.

Gaunitz C, Fages A, Hanghøj K, Albrechtsen A, Khan N, Schubert M, Seguin-Orlando A, Owens IJ, Felkel S, Bignon-Lau O, de Barros Damgaard P, Mittnik A, Mohaseb AF, Davoudi H, Alquraishi S, Alfarhan AH, Al-Rasheid KAS, Crubézy E, Benecke N, Olsen S, Brown D, Anthony D, Massy K, Pitulko V, Kasparov A, Brem G, Hofreiter M, Mukhtarova G, Baimukhanov N, Lõugas L, Onar V, Stockhammer PW, Krause J, Boldgiv B, Undrakhbold S, Erdenebaatar D, Lepetz S, Mashkour M, Ludwig A, Wallner B, Merz V, Merz I, Zaibert V, Willerslev E, Librado P, Outram AK, Orlando L.

Science. 2018 Apr 6;360(6384):111-114. doi: 10.1126/science.aao3297. Epub 2018 Feb 22.

PMID:
29472442
8.

Pregnancy and perinatal conditions and atopic disease prevalence in childhood and adulthood.

Gerlich J, Benecke N, Peters-Weist AS, Heinrich S, Roller D, Genuneit J, Weinmayr G, Windstetter D, Dressel H, Range U, Nowak D, von Mutius E, Radon K, Vogelberg C.

Allergy. 2018 May;73(5):1064-1074. doi: 10.1111/all.13372. Epub 2017 Dec 15.

PMID:
29193127
9.

Endogenous Retroviral Insertions Indicate a Secondary Introduction of Domestic Sheep Lineages to the Caucasus and Central Asia between the Bronze and Iron Age.

Schroeder O, Benecke N, Frölich K, Peng Z, Kaniuth K, Sverchkov L, Reinhold S, Belinskiy A, Ludwig A.

Genes (Basel). 2017 Jun 20;8(6). pii: E165. doi: 10.3390/genes8060165.

10.

Ancient genomic changes associated with domestication of the horse.

Librado P, Gamba C, Gaunitz C, Der Sarkissian C, Pruvost M, Albrechtsen A, Fages A, Khan N, Schubert M, Jagannathan V, Serres-Armero A, Kuderna LFK, Povolotskaya IS, Seguin-Orlando A, Lepetz S, Neuditschko M, Thèves C, Alquraishi S, Alfarhan AH, Al-Rasheid K, Rieder S, Samashev Z, Francfort HP, Benecke N, Hofreiter M, Ludwig A, Keyser C, Marques-Bonet T, Ludes B, Crubézy E, Leeb T, Willerslev E, Orlando L.

Science. 2017 Apr 28;356(6336):442-445. doi: 10.1126/science.aam5298.

PMID:
28450643
11.

Acute Cerebral Symptoms in a Child with Down Syndrome and Acute Leukemia - What has to be Considered?

Benecke N, Lange BS, Suttorp M, Hahn G, Knöfler R.

Klin Padiatr. 2017 May;229(3):177-179. doi: 10.1055/s-0042-124665. Epub 2017 Apr 4. No abstract available.

PMID:
28376541
12.

Spotted phenotypes in horses lost attractiveness in the Middle Ages.

Wutke S, Benecke N, Sandoval-Castellanos E, Döhle HJ, Friederich S, Gonzalez J, Hallsson JH, Hofreiter M, Lõugas L, Magnell O, Morales-Muniz A, Orlando L, Pálsdóttir AH, Reissmann M, Ruttkay M, Trinks A, Ludwig A.

Sci Rep. 2016 Dec 7;6:38548. doi: 10.1038/srep38548.

13.

MicroRNA 628-5p as a Novel Biomarker for Cardiac Allograft Vasculopathy.

Neumann A, Napp LC, Kleeberger JA, Benecke N, Pfanne A, Haverich A, Thum T, Bara C.

Transplantation. 2017 Jan;101(1):e26-e33. doi: 10.1097/TP.0000000000001477.

PMID:
27653298
14.

The origin of ambling horses.

Wutke S, Andersson L, Benecke N, Sandoval-Castellanos E, Gonzalez J, Hallsson JH, Lõugas L, Magnell O, Morales-Muniz A, Orlando L, Pálsdóttir AH, Reissmann M, Muñoz-Rodríguez MB, Ruttkay M, Trinks A, Hofreiter M, Ludwig A.

Curr Biol. 2016 Aug 8;26(15):R697-R699. doi: 10.1016/j.cub.2016.07.001.

15.

Millennial-scale faunal record reveals differential resilience of European large mammals to human impacts across the Holocene.

Crees JJ, Carbone C, Sommer RS, Benecke N, Turvey ST.

Proc Biol Sci. 2016 Mar 30;283(1827):20152152. doi: 10.1098/rspb.2015.2152.

16.

Novel method for the generation of tissue-engineered vascular grafts based on a highly compacted fibrin matrix.

Aper T, Wilhelmi M, Gebhardt C, Hoeffler K, Benecke N, Hilfiker A, Haverich A.

Acta Biomater. 2016 Jan;29:21-32. doi: 10.1016/j.actbio.2015.10.012. Epub 2015 Oct 21.

PMID:
26472610
17.

The genetic prehistory of domesticated cattle from their origin to the spread across Europe.

Scheu A, Powell A, Bollongino R, Vigne JD, Tresset A, Çakırlar C, Benecke N, Burger J.

BMC Genet. 2015 May 28;16:54. doi: 10.1186/s12863-015-0203-2.

18.

Twenty-five thousand years of fluctuating selection on leopard complex spotting and congenital night blindness in horses.

Ludwig A, Reissmann M, Benecke N, Bellone R, Sandoval-Castellanos E, Cieslak M, Fortes GG, Morales-Muñiz A, Hofreiter M, Pruvost M.

Philos Trans R Soc Lond B Biol Sci. 2015 Jan 19;370(1660):20130386. doi: 10.1098/rstb.2013.0386.

19.

Ancient mitochondrial DNA and the genetic history of Eurasian beaver (Castor fiber) in Europe.

Horn S, Prost S, Stiller M, Makowiecki D, Kuznetsova T, Benecke N, Pucher E, Hufthammer AK, Schouwenburg C, Shapiro B, Hofreiter M.

Mol Ecol. 2014 Apr;23(7):1717-29.

PMID:
24795996
20.

Pig domestication and human-mediated dispersal in western Eurasia revealed through ancient DNA and geometric morphometrics.

Ottoni C, Flink LG, Evin A, Geörg C, De Cupere B, Van Neer W, Bartosiewicz L, Linderholm A, Barnett R, Peters J, Decorte R, Waelkens M, Vanderheyden N, Ricaut FX, Cakirlar C, Cevik O, Hoelzel AR, Mashkour M, Karimlu AF, Seno SS, Daujat J, Brock F, Pinhasi R, Hongo H, Perez-Enciso M, Rasmussen M, Frantz L, Megens HJ, Crooijmans R, Groenen M, Arbuckle B, Benecke N, Vidarsdottir US, Burger J, Cucchi T, Dobney K, Larson G.

Mol Biol Evol. 2013 Apr;30(4):824-32. doi: 10.1093/molbev/mss261. Epub 2012 Nov 22.

21.

Genetic stability in the Icelandic horse breed.

Campana MG, Stock F, Barrett E, Benecke N, Barker GW, Seetah K, Bower MA.

Anim Genet. 2012 Aug;43(4):447-9. doi: 10.1111/j.1365-2052.2011.02266.x. Epub 2011 Oct 18.

PMID:
22497715
22.

From genes to phenotypes - evaluation of two methods for the SNP analysis in archaeological remains: pyrosequencing and competitive allele specific PCR (KASPar).

Pruvost M, Reissmann M, Benecke N, Ludwig A.

Ann Anat. 2012 Jan 20;194(1):74-81. doi: 10.1016/j.aanat.2011.10.007. Epub 2011 Nov 3.

PMID:
22154270
23.

Genotypes of predomestic horses match phenotypes painted in Paleolithic works of cave art.

Pruvost M, Bellone R, Benecke N, Sandoval-Castellanos E, Cieslak M, Kuznetsova T, Morales-Muñiz A, O'Connor T, Reissmann M, Hofreiter M, Ludwig A.

Proc Natl Acad Sci U S A. 2011 Nov 15;108(46):18626-30. doi: 10.1073/pnas.1108982108. Epub 2011 Nov 7.

24.

Discovery of lost diversity of paternal horse lineages using ancient DNA.

Lippold S, Knapp M, Kuznetsova T, Leonard JA, Benecke N, Ludwig A, Rasmussen M, Cooper A, Weinstock J, Willerslev E, Shapiro B, Hofreiter M.

Nat Commun. 2011 Aug 23;2:450. doi: 10.1038/ncomms1447.

PMID:
21863017
25.

Origin and history of mitochondrial DNA lineages in domestic horses.

Cieslak M, Pruvost M, Benecke N, Hofreiter M, Morales A, Reissmann M, Ludwig A.

PLoS One. 2010 Dec 20;5(12):e15311. doi: 10.1371/journal.pone.0015311.

26.

Coat color variation at the beginning of horse domestication.

Ludwig A, Pruvost M, Reissmann M, Benecke N, Brockmann GA, Castaños P, Cieslak M, Lippold S, Llorente L, Malaspinas AS, Slatkin M, Hofreiter M.

Science. 2009 Apr 24;324(5926):485. doi: 10.1126/science.1172750.

27.

Tracing the first steps of American sturgeon pioneers in Europe.

Ludwig A, Arndt U, Lippold S, Benecke N, Debus L, King TL, Matsumura S.

BMC Evol Biol. 2008 Jul 29;8:221. doi: 10.1186/1471-2148-8-221.

28.

Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs.

Edwards CJ, Bollongino R, Scheu A, Chamberlain A, Tresset A, Vigne JD, Baird JF, Larson G, Ho SY, Heupink TH, Shapiro B, Freeman AR, Thomas MG, Arbogast RM, Arndt B, Bartosiewicz L, Benecke N, Budja M, Chaix L, Choyke AM, Coqueugniot E, Döhle HJ, Göldner H, Hartz S, Helmer D, Herzig B, Hongo H, Mashkour M, Ozdogan M, Pucher E, Roth G, Schade-Lindig S, Schmölcke U, Schulting RJ, Stephan E, Uerpmann HP, Vörös I, Voytek B, Bradley DG, Burger J.

Proc Biol Sci. 2007 Jun 7;274(1616):1377-85.

29.

When the American sea sturgeon swam east.

Ludwig A, Debus L, Lieckfeldt D, Wirgin I, Benecke N, Jenneckens I, Williot P, Waldman JR, Pitra C.

Nature. 2002 Oct 3;419(6906):447-8. Erratum in: Nature. 2004 March 11;428(6979):140.

PMID:
12368843

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