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Items: 1 to 50 of 69

1.

SWATH-MS quantitative proteomic investigation of intrauterine growth restriction in a porcine model reveals sex differences in hippocampus development.

Valent D, Yeste N, Hernández-Castellano LE, Arroyo L, Wu W, García-Contreras C, Vázquez-Gómez M, González-Bulnes A, Bendixen E, Bassols A.

J Proteomics. 2019 Jul 30;204:103391. doi: 10.1016/j.jprot.2019.103391. Epub 2019 May 24.

PMID:
31129268
2.

Comparing SRM and SWATH Methods for Quantitation of Bovine Muscle Proteomes.

Wu W, Dai RT, Bendixen E.

J Agric Food Chem. 2019 Feb 6;67(5):1608-1618. doi: 10.1021/acs.jafc.8b05459. Epub 2019 Jan 23.

PMID:
30624930
3.

Dynein links engulfment and execution of apoptosis via CED-4/Apaf1 in C. elegans.

Harders RH, Morthorst TH, Lande AD, Hesselager MO, Mandrup OA, Bendixen E, Stensballe A, Olsen A.

Cell Death Dis. 2018 Sep 27;9(10):1012. doi: 10.1038/s41419-018-1067-y.

4.

Selected reaction monitoring mass spectrometry of mastitis milk reveals pathogen-specific regulation of bovine host response proteins.

Kusebauch U, Hernández-Castellano LE, Bislev SL, Moritz RL, Røntved CM, Bendixen E.

J Dairy Sci. 2018 Jul;101(7):6532-6541. doi: 10.3168/jds.2017-14312. Epub 2018 Apr 11.

5.

Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework.

Glusman G, Rose PW, Prlić A, Dougherty J, Duarte JM, Hoffman AS, Barton GJ, Bendixen E, Bergquist T, Bock C, Brunk E, Buljan M, Burley SK, Cai B, Carter H, Gao J, Godzik A, Heuer M, Hicks M, Hrabe T, Karchin R, Leman JK, Lane L, Masica DL, Mooney SD, Moult J, Omenn GS, Pearl F, Pejaver V, Reynolds SM, Rokem A, Schwede T, Song S, Tilgner H, Valasatava Y, Zhang Y, Deutsch EW.

Genome Med. 2017 Dec 18;9(1):113. doi: 10.1186/s13073-017-0509-y. Review.

6.

Saturated or unsaturated fat supplemented maternal diets influence omental adipose tissue proteome of suckling goat-kids.

Restelli L, Marques AT, Savoini G, Invernizzi G, Carisetti M, Lecchi C, Bendixen E, Ceciliani F.

Res Vet Sci. 2019 Aug;125:451-458. doi: 10.1016/j.rvsc.2017.10.009. Epub 2017 Nov 3.

7.

We Are Not Alone: The iMOP Initiative and Its Roles in a Biology- and Disease-Driven Human Proteome Project.

Tholey A, Taylor NL, Heazlewood JL, Bendixen E.

J Proteome Res. 2017 Dec 1;16(12):4273-4280. doi: 10.1021/acs.jproteome.7b00408. Epub 2017 Oct 31. Review.

8.

Colostrum and milk protein rankings and ratios of importance to neonatal calf health using a proteomics approach.

Nissen A, Andersen PH, Bendixen E, Ingvartsen KL, Røntved CM.

J Dairy Sci. 2017 Apr;100(4):2711-2728. doi: 10.3168/jds.2016-11722. Epub 2017 Feb 8.

9.

Biochemical and proteomic analyses of the physiological response induced by individual housing in gilts provide new potential stress markers.

Marco-Ramell A, Arroyo L, Peña R, Pato R, Saco Y, Fraile L, Bendixen E, Bassols A.

BMC Vet Res. 2016 Nov 25;12(1):265.

10.

The structure-function relationship for alumina supported platinum during the formation of ammonia from nitrogen oxide and hydrogen in the presence of oxygen.

Adams EC, Merte LR, Hellman A, Skoglundh M, Gustafson J, Bendixen EC, Gabrielsson P, Bertram F, Evertsson J, Zhang C, Carlson S, Carlsson PA.

Phys Chem Chem Phys. 2016 Apr 28;18(16):10850-5. doi: 10.1039/c5cp07624b.

PMID:
27039829
11.

Bovine lactoferrin regulates cell survival, apoptosis and inflammation in intestinal epithelial cells and preterm pig intestine.

Nguyen DN, Jiang P, Stensballe A, Bendixen E, Sangild PT, Chatterton DE.

J Proteomics. 2016 Apr 29;139:95-102. doi: 10.1016/j.jprot.2016.03.020. Epub 2016 Mar 17.

PMID:
26996464
12.

A selected reaction monitoring-based analysis of acute phase proteins in interstitial fluids from experimental equine wounds healing by secondary intention.

Bundgaard L, Bendixen E, Sørensen MA, Harman VM, Beynon RJ, Petersen LJ, Jacobsen S.

Wound Repair Regen. 2016 May;24(3):525-32. doi: 10.1111/wrr.12425. Epub 2016 Mar 31.

PMID:
26899182
13.

FUT1 genetic variants impact protein glycosylation of porcine intestinal mucosa.

Hesselager MO, Everest-Dass AV, Thaysen-Andersen M, Bendixen E, Packer NH.

Glycobiology. 2016 Jun;26(6):607-22. doi: 10.1093/glycob/cww009. Epub 2016 Feb 7.

PMID:
26858341
14.

The Pig PeptideAtlas: A resource for systems biology in animal production and biomedicine.

Hesselager MO, Codrea MC, Sun Z, Deutsch EW, Bennike TB, Stensballe A, Bundgaard L, Moritz RL, Bendixen E.

Proteomics. 2016 Feb;16(4):634-44. doi: 10.1002/pmic.201500195.

15.

Quantitative proteomics and bioinformatic analysis provide new insight into the dynamic response of porcine intestine to Salmonella Typhimurium.

Collado-Romero M, Aguilar C, Arce C, Lucena C, Codrea MC, Morera L, Bendixen E, Moreno Á, Garrido JJ.

Front Cell Infect Microbiol. 2015 Sep 3;5:64. doi: 10.3389/fcimb.2015.00064. eCollection 2015.

16.

Multi-Organism Proteomes (iMOP): Advancing our Understanding of Human Biology.

Heazlewood JL, Schrimpf SP, Becher D, Riedel K, Tholey A, Bendixen E.

Proteomics. 2015 Sep;15(17):2885-94. doi: 10.1002/pmic.201570153. No abstract available.

PMID:
26331910
17.

Draft Genome Sequence of Clostridium tyrobutyricum Strain DIVETGP, Isolated from Cow's Milk for Grana Padano Production.

Soggiu A, Piras C, Gaiarsa S, Bendixen E, Panitz F, Bendixen C, Sassera D, Brasca M, Bonizzi L, Roncada P.

Genome Announc. 2015 Mar 26;3(2). pii: e00213-15. doi: 10.1128/genomeA.00213-15.

18.

Evaluation of preparation methods for MS-based analysis of intestinal epithelial cell proteomes.

Hesselager MO, Codrea MC, Bendixen E.

Proteomics. 2015 Jul;15(13):2350-7. doi: 10.1002/pmic.201500024. Epub 2015 May 5.

PMID:
25765510
19.

Protective effects of transforming growth factor β2 in intestinal epithelial cells by regulation of proteins associated with stress and endotoxin responses.

Nguyen DN, Jiang P, Jacobsen S, Sangild PT, Bendixen E, Chatterton DE.

PLoS One. 2015 Feb 10;10(2):e0117608. doi: 10.1371/journal.pone.0117608. eCollection 2015.

20.

Colostrum protein uptake in neonatal lambs examined by descriptive and quantitative liquid chromatography-tandem mass spectrometry.

Hernández-Castellano LE, Argüello A, Almeida AM, Castro N, Bendixen E.

J Dairy Sci. 2015 Jan;98(1):135-47. doi: 10.3168/jds.2014-8143. Epub 2014 Nov 7.

21.

Animal board invited review: advances in proteomics for animal and food sciences.

Almeida AM, Bassols A, Bendixen E, Bhide M, Ceciliani F, Cristobal S, Eckersall PD, Hollung K, Lisacek F, Mazzucchelli G, McLaughlin M, Miller I, Nally JE, Plowman J, Renaut J, Rodrigues P, Roncada P, Staric J, Turk R.

Animal. 2015 Jan;9(1):1-17. doi: 10.1017/S1751731114002602. Epub 2014 Oct 31. Review.

22.

The use of liquid chromatography tandem mass spectrometry to detect proteins in saliva from horses with and without systemic inflammation.

Jacobsen S, Top Adler DM, Bundgaard L, Sørensen MA, Andersen PH, Bendixen E.

Vet J. 2014 Dec;202(3):483-8. doi: 10.1016/j.tvjl.2014.08.032. Epub 2014 Sep 16.

PMID:
25296850
23.

Animal models for translational proteomics.

Bendixen E.

Proteomics Clin Appl. 2014 Oct;8(9-10):637-9. doi: 10.1002/prca.201470054. No abstract available.

PMID:
25274148
24.

Development of a method for absolute quantification of equine acute phase proteins using concatenated peptide standards and selected reaction monitoring.

Bundgaard L, Jacobsen S, Dyrlund TF, Sørensen MA, Harman VM, Beynon RJ, Brownridge PJ, Petersen LJ, Bendixen E.

J Proteome Res. 2014 Dec 5;13(12):5635-47. doi: 10.1021/pr500607s. Epub 2014 Oct 7.

PMID:
25250876
25.

LC-MS/MS analysis of visceral and subcutaneous adipose tissue proteomes in young goats with focus on innate immunity and inflammation related proteins.

Restelli L, Codrea MC, Savoini G, Ceciliani F, Bendixen E.

J Proteomics. 2014 Aug 28;108:295-305. doi: 10.1016/j.jprot.2014.05.027. Epub 2014 Jun 6.

PMID:
24911890
26.

The adipose tissue in farm animals: a proteomic approach.

Sauerwein H, Bendixen E, Restelli L, Ceciliani F.

Curr Protein Pept Sci. 2014 Mar;15(2):146-55. Review.

PMID:
24555890
27.

The Equine PeptideAtlas: a resource for developing proteomics-based veterinary research.

Bundgaard L, Jacobsen S, Sørensen MA, Sun Z, Deutsch EW, Moritz RL, Bendixen E.

Proteomics. 2014 Mar;14(6):763-73. doi: 10.1002/pmic.201300398. Epub 2014 Feb 16.

28.

Expanding the bovine milk proteome through extensive fractionation.

Nissen A, Bendixen E, Ingvartsen KL, Røntved CM.

J Dairy Sci. 2013;96(12):7854-66. doi: 10.3168/jds.2013-7106. Epub 2013 Oct 17.

29.

The mammary gland in domestic ruminants: a systems biology perspective.

Ferreira AM, Bislev SL, Bendixen E, Almeida AM.

J Proteomics. 2013 Dec 6;94:110-23. doi: 10.1016/j.jprot.2013.09.012. Epub 2013 Sep 26.

PMID:
24076120
30.

Model organisms proteomics--from holobionts to human nutrition.

Tholey A, Treitz C, Kussmann M, Bendixen E, Schrimpf SP, Hengartner MO.

Proteomics. 2013 Sep;13(17):2537-41. doi: 10.1002/pmic.201370144.

PMID:
24039199
31.

Large pore dermal microdialysis and liquid chromatography-tandem mass spectroscopy shotgun proteomic analysis: a feasibility study.

Petersen LJ, Sørensen MA, Codrea MC, Zacho HD, Bendixen E.

Skin Res Technol. 2013 Nov;19(4):424-31. doi: 10.1111/srt.12063. Epub 2013 Mar 28.

PMID:
23551181
32.

Identification of hepatic biomarkers for physiological imbalance of dairy cows in early and mid lactation using proteomic technology.

Moyes KM, Bendixen E, Codrea MC, Ingvartsen KL.

J Dairy Sci. 2013 Jun;96(6):3599-610. doi: 10.3168/jds.2012-5900. Epub 2013 Mar 30.

33.

Liver protein expression in young pigs in response to a high-fat diet and diet restriction.

Sejersen H, Sørensen MT, Larsen T, Bendixen E, Ingvartsen KL.

J Anim Sci. 2013 Jan;91(1):147-58. doi: 10.2527/jas.2012-5303. Epub 2012 Oct 9.

PMID:
23048158
34.

Proteomics: a new tool in bovine claw disease research.

Tølbøll TH, Danscher AM, Andersen PH, Codrea MC, Bendixen E.

Vet J. 2012 Sep;193(3):694-700. doi: 10.1016/j.tvjl.2012.07.008. Epub 2012 Aug 9.

PMID:
22884987
35.

In-depth analysis of low abundant proteins in bovine colostrum using different fractionation techniques.

Nissen A, Bendixen E, Ingvartsen KL, Røntved CM.

Proteomics. 2012 Sep;12(18):2866-78. doi: 10.1002/pmic.201200231.

PMID:
22848049
36.

A Bovine PeptideAtlas of milk and mammary gland proteomes.

Bislev SL, Deutsch EW, Sun Z, Farrah T, Aebersold R, Moritz RL, Bendixen E, Codrea MC.

Proteomics. 2012 Sep;12(18):2895-9. doi: 10.1002/pmic.201200057.

37.

Pig proteomics: a review of a species in the crossroad between biomedical and food sciences.

de Almeida AM, Bendixen E.

J Proteomics. 2012 Jul 19;75(14):4296-314. doi: 10.1016/j.jprot.2012.04.010. Epub 2012 Apr 20. Review.

PMID:
22543283
38.

"Muscle to meat" molecular events and technological transformations: the proteomics insight.

Paredi G, Raboni S, Bendixen E, de Almeida AM, Mozzarelli A.

J Proteomics. 2012 Jul 19;75(14):4275-89. doi: 10.1016/j.jprot.2012.04.011. Epub 2012 Apr 19. Review.

PMID:
22543183
39.

Liver protein expression in dairy cows with high liver triglycerides in early lactation.

Sejersen H, Sørensen MT, Larsen T, Bendixen E, Ingvartsen KL.

J Dairy Sci. 2012 May;95(5):2409-21. doi: 10.3168/jds.2011-4604.

40.

The initiative on Model Organism Proteomes (iMOP) Session September 6, 2011, Geneva, Switzerland.

Schrimpf SP, von Mering C, Bendixen E, Heazlewood JL, Bumann D, Omenn G, Hengartner MO.

Proteomics. 2012 Feb;12(3):346-50. doi: 10.1002/pmic.201290015.

41.

The HUPO initiative on Model Organism Proteomes, iMOP.

Jones AM, Aebersold R, Ahrens CH, Apweiler R, Baerenfaller K, Baker M, Bendixen E, Briggs S, Brownridge P, Brunner E, Daube M, Deutsch EW, Grossniklaus U, Heazlewood J, Hengartner MO, Hermjakob H, Jovanovic M, Lawless C, Lochnit G, Martens L, Ravnsborg C, Schrimpf SP, Shim YH, Subasic D, Tholey A, Wijk Kv, Mering Cv, Weiss M, Zheng X.

Proteomics. 2012 Feb;12(3):340-5. doi: 10.1002/pmic.201290014.

PMID:
22290800
42.

Quantotypic properties of QconCAT peptides targeting bovine host response to Streptococcus uberis.

Bislev SL, Kusebauch U, Codrea MC, Beynon RJ, Harman VM, Røntved CM, Aebersold R, Moritz RL, Bendixen E.

J Proteome Res. 2012 Mar 2;11(3):1832-43. doi: 10.1021/pr201064g. Epub 2012 Feb 8.

43.

Changes in protein abundance between tender and tough meat from bovine longissimus thoracis muscle assessed by isobaric Tag for Relative and Absolute Quantitation (iTRAQ) and 2-dimensional gel electrophoresis analysis.

Bjarnadóttir SG, Hollung K, Høy M, Bendixen E, Codrea MC, Veiseth-Kent E.

J Anim Sci. 2012 Jun;90(6):2035-43. doi: 10.2527/jas.2011-4721. Epub 2011 Dec 16.

PMID:
22178849
44.

Farm animal proteomics--a review.

Bendixen E, Danielsen M, Hollung K, Gianazza E, Miller I.

J Proteomics. 2011 Mar 1;74(3):282-93. doi: 10.1016/j.jprot.2010.11.005. Epub 2010 Nov 26. Review.

PMID:
21112346
45.

An in vivo characterization of colostrum protein uptake in porcine gut during early lactation.

Danielsen M, Pedersen LJ, Bendixen E.

J Proteomics. 2011 Jan 1;74(1):101-9. doi: 10.1016/j.jprot.2010.08.011. Epub 2010 Sep 8.

PMID:
20831910
46.

Advances in porcine genomics and proteomics--a toolbox for developing the pig as a model organism for molecular biomedical research.

Bendixen E, Danielsen M, Larsen K, Bendixen C.

Brief Funct Genomics. 2010 May;9(3):208-19. doi: 10.1093/bfgp/elq004. Review.

PMID:
20495211
47.

Quantitative milk proteomics--host responses to lipopolysaccharide-mediated inflammation of bovine mammary gland.

Danielsen M, Codrea MC, Ingvartsen KL, Friggens NC, Bendixen E, Røntved CM.

Proteomics. 2010 Jun;10(12):2240-9. doi: 10.1002/pmic.200900771.

PMID:
20352626
48.

Proteomic characterization of a temperature-sensitive conditional lethal in Drosophila melanogaster.

Pedersen KS, Codrea MC, Vermeulen CJ, Loeschcke V, Bendixen E.

Heredity (Edinb). 2010 Feb;104(2):125-34. doi: 10.1038/hdy.2009.132. Epub 2009 Oct 7.

49.

An exonic insertion encodes an alanine stretch in porcine synapsin I.

Hedegaard C, Bendixen E, Jensen PH, Bendixen C, Larsen K.

Biochem Genet. 2009 Dec;47(11-12):812-6. doi: 10.1007/s10528-009-9279-6. No abstract available.

PMID:
19633946
50.

Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies.

Hornshøj H, Bendixen E, Conley LN, Andersen PK, Hedegaard J, Panitz F, Bendixen C.

BMC Genomics. 2009 Jan 19;10:30. doi: 10.1186/1471-2164-10-30.

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