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Items: 1 to 50 of 148

1.

Origin and diversification of the plasminogen activation system among chordates.

Chana-Muñoz A, Jendroszek A, Sønnichsen M, Wang T, Ploug M, Jensen JK, Andreasen PA, Bendixen C, Panitz F.

BMC Evol Biol. 2019 Jan 17;19(1):27. doi: 10.1186/s12862-019-1353-z.

2.

Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals.

Bouwman AC, Daetwyler HD, Chamberlain AJ, Ponce CH, Sargolzaei M, Schenkel FS, Sahana G, Govignon-Gion A, Boitard S, Dolezal M, Pausch H, Brøndum RF, Bowman PJ, Thomsen B, Guldbrandtsen B, Lund MS, Servin B, Garrick DJ, Reecy J, Vilkki J, Bagnato A, Wang M, Hoff JL, Schnabel RD, Taylor JF, Vinkhuyzen AAE, Panitz F, Bendixen C, Holm LE, Gredler B, Hozé C, Boussaha M, Sanchez MP, Rocha D, Capitan A, Tribout T, Barbat A, Croiseau P, Drögemüller C, Jagannathan V, Vander Jagt C, Crowley JJ, Bieber A, Purfield DC, Berry DP, Emmerling R, Götz KU, Frischknecht M, Russ I, Sölkner J, Van Tassell CP, Fries R, Stothard P, Veerkamp RF, Boichard D, Goddard ME, Hayes BJ.

Nat Genet. 2018 Mar;50(3):362-367. doi: 10.1038/s41588-018-0056-5. Epub 2018 Feb 19.

PMID:
29459679
3.

The first draft reference genome of the American mink (Neovison vison).

Cai Z, Petersen B, Sahana G, Madsen LB, Larsen K, Thomsen B, Bendixen C, Lund MS, Guldbrandtsen B, Panitz F.

Sci Rep. 2017 Nov 6;7(1):14564. doi: 10.1038/s41598-017-15169-z.

4.

Multi-tissue RNA-seq and transcriptome characterisation of the spiny dogfish shark (Squalus acanthias) provides a molecular tool for biological research and reveals new genes involved in osmoregulation.

Chana-Munoz A, Jendroszek A, Sønnichsen M, Kristiansen R, Jensen JK, Andreasen PA, Bendixen C, Panitz F.

PLoS One. 2017 Aug 23;12(8):e0182756. doi: 10.1371/journal.pone.0182756. eCollection 2017.

5.

Latency transition of plasminogen activator inhibitor type 1 is evolutionarily conserved.

Jendroszek A, Sønnichsen MS, Muñoz AC, Leyman K, Christensen A, Petersen SV, Wang T, Bendixen C, Panitz F, Andreasen PA, Jensen JK.

Thromb Haemost. 2017 Aug 30;117(9):1688-1699. doi: 10.1160/TH17-02-0102. Epub 2017 Aug 3.

PMID:
28771275
6.

A-to-I RNA editing of the IGFBP7 transcript increases during aging in porcine brain tissues.

Larsen K, Kristensen KK, Momeni J, Farajzadeh L, Bendixen C.

Biochem Biophys Res Commun. 2016 Oct 21;479(3):596-601. doi: 10.1016/j.bbrc.2016.09.125. Epub 2016 Sep 26.

PMID:
27687550
7.

Molecular characterization and analysis of the porcine NURR1 gene.

Larsen K, Momeni J, Farajzadeh L, Callesen H, Bendixen C.

Biochim Open. 2016 Jul 19;3:26-39. doi: 10.1016/j.biopen.2016.07.001. eCollection 2016 Dec.

8.

Detection of genetic variation affecting milk coagulation properties in Danish Holstein dairy cattle by analyses of pooled whole-genome sequences from phenotypically extreme samples (pool-seq).

Bertelsen HP, Gregersen VR, Poulsen N, Nielsen RO, Das A, Madsen LB, Buitenhuis AJ, Holm LE, Panitz F, Larsen LB, Bendixen C.

J Anim Sci. 2016 Apr;94(4):1365-76. doi: 10.2527/jas.2015-9884.

PMID:
27135996
9.

Differential A-to-I RNA editing of the serotonin-2C receptor G-protein-coupled, HTR2C, in porcine brain tissues.

Larsen K, Momeni J, Farajzadeh L, Bendixen C.

Biochimie. 2016 Feb;121:189-96. doi: 10.1016/j.biochi.2015.12.011. Epub 2015 Dec 18.

PMID:
26707647
10.

Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes.

Das A, Panitz F, Gregersen VR, Bendixen C, Holm LE.

BMC Genomics. 2015 Dec 9;16:1043. doi: 10.1186/s12864-015-2249-y.

11.

A synteny-based draft genome sequence of the forage grass Lolium perenne.

Byrne SL, Nagy I, Pfeifer M, Armstead I, Swain S, Studer B, Mayer K, Campbell JD, Czaban A, Hentrup S, Panitz F, Bendixen C, Hedegaard J, Caccamo M, Asp T.

Plant J. 2015 Nov;84(4):816-26. doi: 10.1111/tpj.13037.

12.

Tissue Remodelling following Resection of Porcine Liver.

Nygård IE, Mortensen KE, Hedegaard J, Conley LN, Bendixen C, Sveinbjørnsson B, Revhaug A.

Biomed Res Int. 2015;2015:248920. doi: 10.1155/2015/248920. Epub 2015 Jul 9.

13.

Splicing variants of porcine synphilin-1.

Larsen K, Madsen LB, Farajzadeh L, Bendixen C.

Meta Gene. 2015 Jun 2;5:32-42. doi: 10.1016/j.mgene.2015.04.005. eCollection 2015 Sep.

14.

Draft Genome Sequence of Clostridium tyrobutyricum Strain DIVETGP, Isolated from Cow's Milk for Grana Padano Production.

Soggiu A, Piras C, Gaiarsa S, Bendixen E, Panitz F, Bendixen C, Sassera D, Brasca M, Bonizzi L, Roncada P.

Genome Announc. 2015 Mar 26;3(2). pii: e00213-15. doi: 10.1128/genomeA.00213-15.

15.

Bovine chromosomal regions affecting rheological traits in acid-induced skim milk gels.

Glantz M, Gustavsson F, Bertelsen HP, Stålhammar H, Lindmark-Månsson H, Paulsson M, Bendixen C, Gregersen VR.

J Dairy Sci. 2015 Feb;98(2):1273-85. doi: 10.3168/jds.2014-8137. Epub 2014 Dec 18.

16.

Bovine chromosomal regions affecting rheological traits in rennet-induced skim milk gels.

Gregersen VR, Gustavsson F, Glantz M, Christensen OF, Stålhammar H, Andrén A, Lindmark-Månsson H, Poulsen NA, Larsen LB, Paulsson M, Bendixen C.

J Dairy Sci. 2015 Feb;98(2):1261-72. doi: 10.3168/jds.2014-8136. Epub 2014 Dec 12.

17.

A hereditary disposition for bovine peripheral nerve sheath tumors in Danish Holstein cattle.

Grossi AB, Agerholm JS, Christensen K, Jensen HE, Leifsson PS, Bendixen C, Karlskov-Mortensen P, Fredholm M.

Acta Vet Scand. 2014 Dec 10;56:85. doi: 10.1186/s13028-014-0085-8.

18.

Porcine SLITRK1: Molecular cloning and characterization.

Larsen K, Momeni J, Farajzadeh L, Bendixen C.

FEBS Open Bio. 2014 Oct 7;4:872-8. doi: 10.1016/j.fob.2014.10.001. eCollection 2014.

19.

Cloning and characterization of the porcine DBC1 gene encoding deleted in bladder cancer.

Larsen K, Momeni J, Farajzadeh L, Bendixen C.

Mol Biol Rep. 2015 Feb;42(2):383-91. doi: 10.1007/s11033-014-3779-0. Epub 2014 Sep 26.

PMID:
25258124
20.

Genome-wide association study using high-density single nucleotide polymorphism arrays and whole-genome sequences for clinical mastitis traits in dairy cattle.

Sahana G, Guldbrandtsen B, Thomsen B, Holm LE, Panitz F, Brøndum RF, Bendixen C, Lund MS.

J Dairy Sci. 2014 Nov;97(11):7258-75. doi: 10.3168/jds.2014-8141. Epub 2014 Aug 22.

21.

Surfactant protein-D-encoding gene variant polymorphisms are linked to respiratory outcome in premature infants.

Sorensen GL, Dahl M, Tan Q, Bendixen C, Holmskov U, Husby S.

J Pediatr. 2014 Oct;165(4):683-9. doi: 10.1016/j.jpeds.2014.05.042. Epub 2014 Jul 9.

PMID:
25015576
22.

Effects of breed and casein genetic variants on protein profile in milk from Swedish Red, Danish Holstein, and Danish Jersey cows.

Gustavsson F, Buitenhuis AJ, Johansson M, Bertelsen HP, Glantz M, Poulsen NA, Lindmark Månsson H, Stålhammar H, Larsen LB, Bendixen C, Paulsson M, Andrén A.

J Dairy Sci. 2014;97(6):3866-77. doi: 10.3168/jds.2013-7312. Epub 2014 Apr 3.

23.

Porcine synapsin 1: SYN1 gene analysis and functional characterization of the promoter.

Hedegaard C, Kjaer-Sorensen K, Madsen LB, Henriksen C, Momeni J, Bendixen C, Oxvig C, Larsen K.

FEBS Open Bio. 2013 Oct 7;3:411-20. doi: 10.1016/j.fob.2013.10.002. eCollection 2013.

24.

Molecular cloning and characterization of porcine Na⁺/K⁺-ATPase isoforms α1, α2, α3 and the ATP1A3 promoter.

Henriksen C, Kjaer-Sorensen K, Einholm AP, Madsen LB, Momeni J, Bendixen C, Oxvig C, Vilsen B, Larsen K.

PLoS One. 2013 Nov 13;8(11):e79127. doi: 10.1371/journal.pone.0079127. eCollection 2013.

25.

Pairwise comparisons of ten porcine tissues identify differential transcriptional regulation at the gene, isoform, promoter and transcription start site level.

Farajzadeh L, Hornshøj H, Momeni J, Thomsen B, Larsen K, Hedegaard J, Bendixen C, Madsen LB.

Biochem Biophys Res Commun. 2013 Aug 23;438(2):346-52. doi: 10.1016/j.bbrc.2013.07.074. Epub 2013 Jul 27.

26.

The occurrence of noncoagulating milk and the association of bovine milk coagulation properties with genetic variants of the caseins in 3 Scandinavian dairy breeds.

Poulsen NA, Bertelsen HP, Jensen HB, Gustavsson F, Glantz M, Månsson HL, Andrén A, Paulsson M, Bendixen C, Buitenhuis AJ, Larsen LB.

J Dairy Sci. 2013 Aug;96(8):4830-42. doi: 10.3168/jds.2012-6422. Epub 2013 Jun 5.

27.

Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat.

Belova T, Zhan B, Wright J, Caccamo M, Asp T, Simková H, Kent M, Bendixen C, Panitz F, Lien S, Doležel J, Olsen OA, Sandve SR.

BMC Genomics. 2013 Apr 4;14:222. doi: 10.1186/1471-2164-14-222.

28.

The genome and transcriptome of perennial ryegrass mitochondria.

Islam MS, Studer B, Byrne SL, Farrell JD, Panitz F, Bendixen C, Møller IM, Asp T.

BMC Genomics. 2013 Mar 23;14:202. doi: 10.1186/1471-2164-14-202.

29.

Genome wide allele frequency fingerprints (GWAFFs) of populations via genotyping by sequencing.

Byrne S, Czaban A, Studer B, Panitz F, Bendixen C, Asp T.

PLoS One. 2013;8(3):e57438. doi: 10.1371/journal.pone.0057438. Epub 2013 Mar 4.

30.

Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne.

Ruttink T, Sterck L, Rohde A, Bendixen C, Rouzé P, Asp T, Van de Peer Y, Roldan-Ruiz I.

Plant Biotechnol J. 2013 Jun;11(5):605-17. doi: 10.1111/pbi.12051. Epub 2013 Feb 21.

31.

The genetic regulation of the terminating phase of liver regeneration.

Nygård IE, Mortensen KE, Hedegaard J, Conley LN, Kalstad T, Bendixen C, Revhaug A.

Comp Hepatol. 2012 Nov 20;11(1):3. doi: 10.1186/1476-5926-11-3.

32.

Analyses of pig genomes provide insight into porcine demography and evolution.

Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, Ahn H, Aken BL, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie CW, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi SH, Chow W, Clark RC, Clee C, Crooijmans RP, Dawson HD, Dehais P, De Sapio F, Dibbits B, Drou N, Du ZQ, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner GJ, Fowler KE, Fredholm M, Fritz E, Gilbert JG, Giuffra E, Gorodkin J, Griffin DK, Harrow JL, Hayward A, Howe K, Hu ZL, Humphray SJ, Hunt T, Hornshøj H, Jeon JT, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim JH, Kim KW, Kim TH, Larson G, Lee K, Lee KT, Leggett R, Lewin HA, Li Y, Liu W, Loveland JE, Lu Y, Lunney JK, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh MP, Narayan J, Nguyen DT, Ni P, Oh SJ, Onteru S, Panitz F, Park EW, Park HS, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy JM, Rodriguez-Zas S, Rohrer GA, Rund L, Sang Y, Schachtschneider K, Schraiber JG, Schwartz J, Scobie L, Scott C, Searle S, Servin B, Southey BR, Sperber G, Stadler P, Sweedler JV, Tafer H, Thomsen B, Wali R, Wang J, Wang J, White S, Xu X, Yerle M, Zhang G, Zhang J, Zhang J, Zhao S, Rogers J, Churcher C, Schook LB.

Nature. 2012 Nov 15;491(7424):393-8. doi: 10.1038/nature11622.

33.

Association study of molecular polymorphisms in candidate genes related to stress responses with production and meat quality traits in pigs.

Terenina E, Babigumira BM, Le Mignon G, Bazovkina D, Rousseau S, Salin F, Bendixen C, Mormede P.

Domest Anim Endocrinol. 2013 Feb;44(2):81-97. doi: 10.1016/j.domaniend.2012.09.004. Epub 2012 Oct 1.

PMID:
23063408
34.

Spatio-temporal regulation of ADAR editing during development in porcine neural tissues.

Venø MT, Bramsen JB, Bendixen C, Panitz F, Holm IE, Öhman M, Kjems J.

RNA Biol. 2012 Aug;9(8):1054-65. doi: 10.4161/rna.21082. Epub 2012 Aug 1.

35.

Porcine dorfin: molecular cloning of the RNF19 gene, sequence comparison, mapping and expression analysis.

Larsen K, Madsen LB, Bendixen C.

Mol Biol Rep. 2012 Dec;39(12):10053-62. doi: 10.1007/s11033-012-1874-7. Epub 2012 Jul 4.

PMID:
22760261
36.

Gene-associated markers provide tools for tackling illegal fishing and false eco-certification.

Nielsen EE, Cariani A, Mac Aoidh E, Maes GE, Milano I, Ogden R, Taylor M, Hemmer-Hansen J, Babbucci M, Bargelloni L, Bekkevold D, Diopere E, Grenfell L, Helyar S, Limborg MT, Martinsohn JT, McEwing R, Panitz F, Patarnello T, Tinti F, Van Houdt JK, Volckaert FA, Waples RS; FishPopTrace consortium, Albin JE, Vieites Baptista JM, Barmintsev V, Bautista JM, Bendixen C, Bergé JP, Blohm D, Cardazzo B, Diez A, Espiñeira M, Geffen AJ, Gonzalez E, González-Lavín N, Guarniero I, Jeráme M, Kochzius M, Krey G, Mouchel O, Negrisolo E, Piccinetti C, Puyet A, Rastorguev S, Smith JP, Trentini M, Verrez-Bagnis V, Volkov A, Zanzi A, Carvalho GR.

Nat Commun. 2012 May 22;3:851. doi: 10.1038/ncomms1845. Erratum in: Nat Commun. 2013;4. doi: 10.1038/ncomms2975.

PMID:
22617291
37.

A transcriptome map of perennial ryegrass (Lolium perenne L.).

Studer B, Byrne S, Nielsen RO, Panitz F, Bendixen C, Islam MS, Pfeifer M, Lübberstedt T, Asp T.

BMC Genomics. 2012 Apr 18;13:140. doi: 10.1186/1471-2164-13-140.

38.

A molecular study of congenital erythropoietic porphyria in cattle.

Agerholm JS, Thulstrup PW, Bjerrum MJ, Bendixen C, Jørgensen CB, Fredholm M.

Anim Genet. 2012 Apr;43(2):210-5. doi: 10.1111/j.1365-2052.2011.02228.x. Epub 2011 Jul 21.

PMID:
22404357
39.

Genomic position mapping discrepancies of commercial SNP chips.

Fadista J, Bendixen C.

PLoS One. 2012;7(2):e31025. doi: 10.1371/journal.pone.0031025. Epub 2012 Feb 17.

40.

Gene expression profiling of porcine skeletal muscle in the early recovery phase following acute physical activity.

Jensen JH, Conley LN, Hedegaard J, Nielsen M, Young JF, Oksbjerg N, Hornshøj H, Bendixen C, Thomsen B.

Exp Physiol. 2012 Jul;97(7):833-48. doi: 10.1113/expphysiol.2011.063727. Epub 2012 Feb 15.

41.

Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms.

Kjeldsen KU, Bataillon T, Pinel N, De Mita S, Lund MB, Panitz F, Bendixen C, Stahl DA, Schramm A.

Genome Biol Evol. 2012;4(3):307-15. doi: 10.1093/gbe/evs014. Epub 2012 Feb 14.

42.

Genome-wide association scan and phased haplotype construction for quantitative trait loci affecting boar taint in three pig breeds.

Gregersen VR, Conley LN, Sørensen KK, Guldbrandtsen B, Velander IH, Bendixen C.

BMC Genomics. 2012 Jan 13;13:22. doi: 10.1186/1471-2164-13-22.

43.

Direct MRI-guided stereotaxic viral mediated gene transfer of alpha-synuclein in the Göttingen minipig CNS.

Glud AN, Hedegaard C, Nielsen MS, Søorensen JC, Bendixen C, Jensen PH, Mogensen PH, Larsen K, Bjarkam CR.

Acta Neurobiol Exp (Wars). 2011;71(4):508-18.

44.

Global assessment of genomic variation in cattle by genome resequencing and high-throughput genotyping.

Zhan B, Fadista J, Thomsen B, Hedegaard J, Panitz F, Bendixen C.

BMC Genomics. 2011 Nov 14;12:557. doi: 10.1186/1471-2164-12-557.

45.

Genomic regions associated with ventro-cranial chronic pleuritis in pig.

Sørensen KK, Gregersen VR, Christensen OF, Velander IH, Bendixen C.

J Anim Breed Genet. 2011 Aug;128(4):314-8. doi: 10.1111/j.1439-0388.2010.00914.x. Epub 2011 Apr 19.

PMID:
21749478
46.

Characterisation of five candidate genes within the ETEC F4ab/ac candidate region in pigs.

Jacobsen M, Cirera S, Joller D, Esteso G, Kracht SS, Edfors I, Bendixen C, Archibald AL, Vogeli P, Neuenschwander S, Bertschinger HU, Rampoldi A, Andersson L, Fredholm M, Jørgensen CB.

BMC Res Notes. 2011 Jun 30;4:225. doi: 10.1186/1756-0500-4-225.

47.

Characterization of the porcine FBX07 gene: the first step towards generation of a pig model for Parkinsonian pyramidal syndrome.

Larsen K, Bendixen C.

Mol Biol Rep. 2012 Feb;39(2):1517-26. doi: 10.1007/s11033-011-0890-3. Epub 2011 May 25.

PMID:
21611747
48.

Porcine UCHL1: genomic organization, chromosome localization and expression analysis.

Larsen K, Madsen LB, Bendixen C.

Mol Biol Rep. 2012 Feb;39(2):1095-103. doi: 10.1007/s11033-011-0836-9. Epub 2011 May 13.

PMID:
21567194
49.

Direct gene transfer in the Gottingen minipig CNS using stereotaxic lentiviral microinjections.

Norgaard Glud A, Hedegaard C, Nielsen MS, Sørensen JC, Bendixen C, Jensen PH, Larsen K, Bjarkam CR.

Acta Neurobiol Exp (Wars). 2010;70(3):308-15.

50.

Draft genome sequences of Actinobacillus pleuropneumoniae serotypes 2 and 6.

Zhan B, Angen Ø, Hedegaard J, Bendixen C, Panitz F.

J Bacteriol. 2010 Nov;192(21):5846-7. doi: 10.1128/JB.00867-10. Epub 2010 Aug 27.

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