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Items: 18

1.

The mitochondrial carrier Citrin plays a role in regulating cellular energy during carcinogenesis.

Rabinovich S, Silberman A, Adler L, Agron S, Levin-Zaidman S, Bahat A, Porat Z, Ben-Zeev E, Geva I, Itkin M, Malitsky S, Buchaklian A, Helbling D, Dimmock D, Erez A.

Oncogene. 2019 Aug 28. doi: 10.1038/s41388-019-0976-2. [Epub ahead of print]

PMID:
31462712
2.

Pre-equilibrium competitive library screening for tuning inhibitor association rate and specificity toward serine proteases.

Cohen I, Naftaly S, Ben-Zeev E, Hockla A, Radisky ES, Papo N.

Biochem J. 2018 Apr 16;475(7):1335-1352. doi: 10.1042/BCJ20180070.

3.

A computational combinatorial approach identifies a protein inhibitor of superoxide dismutase 1 misfolding, aggregation, and cytotoxicity.

Banerjee V, Oren O, Ben-Zeev E, Taube R, Engel S, Papo N.

J Biol Chem. 2017 Sep 22;292(38):15777-15788. doi: 10.1074/jbc.M117.789610. Epub 2017 Aug 2.

4.

Selective Assembly of Na,K-ATPase α2β2 Heterodimers in the Heart: DISTINCT FUNCTIONAL PROPERTIES AND ISOFORM-SELECTIVE INHIBITORS.

Habeck M, Tokhtaeva E, Nadav Y, Ben Zeev E, Ferris SP, Kaufman RJ, Bab-Dinitz E, Kaplan JH, Dada LA, Farfel Z, Tal DM, Katz A, Sachs G, Vagin O, Karlish SJ.

J Biol Chem. 2016 Oct 28;291(44):23159-23174. Epub 2016 Sep 13.

5.

Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment.

Lensink MF, Velankar S, Kryshtafovych A, Huang SY, Schneidman-Duhovny D, Sali A, Segura J, Fernandez-Fuentes N, Viswanath S, Elber R, Grudinin S, Popov P, Neveu E, Lee H, Baek M, Park S, Heo L, Rie Lee G, Seok C, Qin S, Zhou HX, Ritchie DW, Maigret B, Devignes MD, Ghoorah A, Torchala M, Chaleil RA, Bates PA, Ben-Zeev E, Eisenstein M, Negi SS, Weng Z, Vreven T, Pierce BG, Borrman TM, Yu J, Ochsenbein F, Guerois R, Vangone A, Rodrigues JP, van Zundert G, Nellen M, Xue L, Karaca E, Melquiond AS, Visscher K, Kastritis PL, Bonvin AM, Xu X, Qiu L, Yan C, Li J, Ma Z, Cheng J, Zou X, Shen Y, Peterson LX, Kim HR, Roy A, Han X, Esquivel-Rodriguez J, Kihara D, Yu X, Bruce NJ, Fuller JC, Wade RC, Anishchenko I, Kundrotas PJ, Vakser IA, Imai K, Yamada K, Oda T, Nakamura T, Tomii K, Pallara C, Romero-Durana M, Jiménez-García B, Moal IH, Férnandez-Recio J, Joung JY, Kim JY, Joo K, Lee J, Kozakov D, Vajda S, Mottarella S, Hall DR, Beglov D, Mamonov A, Xia B, Bohnuud T, Del Carpio CA, Ichiishi E, Marze N, Kuroda D, Roy Burman SS, Gray JJ, Chermak E, Cavallo L, Oliva R, Tovchigrechko A, Wodak SJ.

Proteins. 2016 Sep;84 Suppl 1:323-48. doi: 10.1002/prot.25007. Epub 2016 Jun 1.

6.

A Novel Allosteric Mechanism of NF-κB Dimerization and DNA Binding Targeted by an Anti-Inflammatory Drug.

Ashkenazi S, Plotnikov A, Bahat A, Ben-Zeev E, Warszawski S, Dikstein R.

Mol Cell Biol. 2016 Mar 31;36(8):1237-47. doi: 10.1128/MCB.00895-15. Print 2016 Apr.

7.

Digoxin derivatives with selectivity for the α2β3 isoform of Na,K-ATPase potently reduce intraocular pressure.

Katz A, Tal DM, Heller D, Habeck M, Ben Zeev E, Rabah B, Bar Kana Y, Marcovich AL, Karlish SJ.

Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):13723-8. doi: 10.1073/pnas.1514569112. Epub 2015 Oct 19.

8.

1-(sulfonyl)-5-(arylsulfonyl)indoline as activators of the tumor cell specific M2 isoform of pyruvate kinase.

Yacovan A, Ozeri R, Kehat T, Mirilashvili S, Sherman D, Aizikovich A, Shitrit A, Ben-Zeev E, Schutz N, Bohana-Kashtan O, Konson A, Behar V, Becker OM.

Bioorg Med Chem Lett. 2012 Oct 15;22(20):6460-8. doi: 10.1016/j.bmcl.2012.08.054. Epub 2012 Aug 23.

PMID:
22963766
9.

Small molecule correctors of F508del-CFTR discovered by structure-based virtual screening.

Kalid O, Mense M, Fischman S, Shitrit A, Bihler H, Ben-Zeev E, Schutz N, Pedemonte N, Thomas PJ, Bridges RJ, Wetmore DR, Marantz Y, Senderowitz H.

J Comput Aided Mol Des. 2010 Dec;24(12):971-91. doi: 10.1007/s10822-010-9390-0. Epub 2010 Oct 26.

10.

G protein coupled receptors -in silico drug discovery and design.

Sela I, Golan G, Strajbl M, Rivenzon-Segal D, Bar-Haim S, Bloch I, Inbal B, Shitrit A, Ben-Zeev E, Fichman M, Markus Y, Marantz Y, Senderowitz H, Kalid O.

Curr Top Med Chem. 2010;10(6):638-56. Review.

PMID:
20337589
11.

Docking to single-domain and multiple-domain proteins: old and new challenges.

Ben-Zeev E, Kowalsman N, Ben-Shimon A, Segal D, Atarot T, Noivirt O, Shay T, Eisenstein M.

Proteins. 2005 Aug 1;60(2):195-201.

PMID:
15981268
12.

Experimental and computational characterization of the dimerization of the PTS-regulation domains of BglG from Escherichia coli.

Ben-Zeev E, Fux L, Amster-Choder O, Eisenstein M.

J Mol Biol. 2005 Apr 8;347(4):693-706.

PMID:
15769463
13.

Prediction of the unknown: inspiring experience with the CAPRI experiment.

Ben-Zeev E, Berchanski A, Heifetz A, Shapira B, Eisenstein M.

Proteins. 2003 Jul 1;52(1):41-6.

PMID:
12784366
14.
15.

Prediction of the structure of the complex between the 30S ribosomal subunit and colicin E3 via weighted-geometric docking.

Ben-Zeev E, Zarivach R, Shoham M, Yonath A, Eisenstein M.

J Biomol Struct Dyn. 2003 Apr;20(5):669-76.

PMID:
12643769
16.

On the interaction of colicin E3 with the ribosome.

Zarivach R, Ben-Zeev E, Wu N, Auerbach T, Bashan A, Jakes K, Dickman K, Kosmidis A, Schluenzen F, Yonath A, Eisenstein M, Shoham M.

Biochimie. 2002 May-Jun;84(5-6):447-54.

PMID:
12423788
17.

The RNA helicase DbpA exhibits a markedly different conformation in the ADP-bound state when compared with the ATP- or RNA-bound states.

Henn A, Shi SP, Zarivach R, Ben-Zeev E, Sagi I.

J Biol Chem. 2002 Nov 29;277(48):46559-65. Epub 2002 Sep 24.

18.

Phage display of a cellulose binding domain from Clostridium thermocellum and its application as a tool for antibody engineering.

Berdichevsky Y, Ben-Zeev E, Lamed R, Benhar I.

J Immunol Methods. 1999 Aug 31;228(1-2):151-62.

PMID:
10556552

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