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Items: 1 to 50 of 77

1.

Unsupervised segmentation of mass spectrometric ion images characterizes morphology of tissues.

Guo D, Bemis K, Rawlins C, Agar J, Vitek O.

Bioinformatics. 2019 Jul 15;35(14):i208-i217. doi: 10.1093/bioinformatics/btz345.

2.

Tooth and consequences: Heterodonty and dental replacement in piranhas and pacus (Serrasalmidae).

Kolmann MA, Cohen KE, Bemis KE, Summers AP, Irish FJ, Hernandez LP.

Evol Dev. 2019 Sep;21(5):278-293. doi: 10.1111/ede.12306. Epub 2019 Aug 26.

PMID:
31449734
3.

Life history, distribution and molecular phylogenetics of the Upward-Mouth Spikefish Atrophacanthus japonicus (Teleostei: Tetraodontiformes: Triacanthodidae).

Bemis KE, Tyler JC, Arcila D.

J Fish Biol. 2019 Apr;94(4):578-584. doi: 10.1111/jfb.13923. Epub 2019 Mar 21.

PMID:
30734929
4.

Tooth development and replacement in the Atlantic Cutlassfish, Trichiurus lepturus, with comparisons to other Scombroidei.

Bemis KE, Burke SM, St John CA, Hilton EJ, Bemis WE.

J Morphol. 2019 Jan;280(1):78-94. doi: 10.1002/jmor.20919.

PMID:
30556947
5.

Application-Driven Design: Help Students Understand Employment and See the "Big Picture".

Liu L, Silver D, Bemis K.

IEEE Comput Graph Appl. 2018 May;38(3):90-105. doi: 10.1109/MCG.2018.032421656.

PMID:
29877806
6.

Spatial clusters of latent tuberculous infection, Connecticut, 2010-2014.

Mullins J, Lobato MN, Bemis K, Sosa L.

Int J Tuberc Lung Dis. 2018 Feb 1;22(2):165-170. doi: 10.5588/ijtld.17.0223.

PMID:
29506612
7.

Using an Emergency Department Syndromic Surveillance System to Evaluate Reporting of Potential Rabies Exposures, Illinois, 2013-2015.

Bemis K, Frias M, Patel MT, Christiansen D.

Public Health Rep. 2017 Jul/Aug;132(1_suppl):59S-64S. doi: 10.1177/0033354917708355.

8.

matter: an R package for rapid prototyping with larger-than-memory datasets on disk.

Bemis KA, Vitek O.

Bioinformatics. 2017 Jun 15. doi: 10.1093/bioinformatics/btx392. [Epub ahead of print]

9.

The relative effect of particles and turbulence on acoustic scattering from deep sea hydrothermal vent plumes revisited.

Xu G, Jackson DR, Bemis KG.

J Acoust Soc Am. 2017 Mar;141(3):1446. doi: 10.1121/1.4974828.

PMID:
28372053
10.

Measles Outbreak in a Child Care Center, Cook County, Illinois, 2015.

Clegg WJ, Linchangco PC, Arwady MA, Frias M, Bemis K, Beron AJ, Albertson JP, Conover C, Reid H, Saathoff-Huber L, Echols F, Rubin R, Christiansen D.

J Pediatric Infect Dis Soc. 2017 Sep 1;6(3):239-244. doi: 10.1093/jpids/piw011.

PMID:
27012274
11.

Protein biomarkers on tissue as imaged via MALDI mass spectrometry: A systematic approach to study the limits of detection.

van de Ven SM, Bemis KD, Lau K, Adusumilli R, Kota U, Stolowitz M, Vitek O, Mallick P, Gambhir SS.

Proteomics. 2016 Jun;16(11-12):1660-9. doi: 10.1002/pmic.201500515. Epub 2016 May 11.

PMID:
26970438
12.

Probabilistic Segmentation of Mass Spectrometry (MS) Images Helps Select Important Ions and Characterize Confidence in the Resulting Segments.

Bemis KD, Harry A, Eberlin LS, Ferreira CR, van de Ven SM, Mallick P, Stolowitz M, Vitek O.

Mol Cell Proteomics. 2016 May;15(5):1761-72. doi: 10.1074/mcp.O115.053918. Epub 2016 Jan 21.

13.

Cardinal: an R package for statistical analysis of mass spectrometry-based imaging experiments.

Bemis KD, Harry A, Eberlin LS, Ferreira C, van de Ven SM, Mallick P, Stolowitz M, Vitek O.

Bioinformatics. 2015 Jul 15;31(14):2418-20. doi: 10.1093/bioinformatics/btv146. Epub 2015 Mar 15.

14.

Civil Surgeon Tuberculosis Evaluations for Foreign-Born Persons Seeking Permanent U.S. Residence.

Bemis K, Thornton A, Rodriguez-Lainz A, Lowenthal P, Escobedo M, Sosa LE, Tibbs A, Sharnprapai S, Moser KS, Cochran J, Lobato MN.

J Immigr Minor Health. 2016 Apr;18(2):301-7. doi: 10.1007/s10903-015-0169-1.

15.

Socioeconomic status and campylobacteriosis, Connecticut, USA, 1999-2009.

Bemis K, Marcus R, Hadler JL.

Emerg Infect Dis. 2014 Jul;20(7):1240-2. doi: 10.3201/eid2007.131333. No abstract available.

16.

Activity detection in scientific visualization.

Ozer S, Silver D, Bemis K, Martin P.

IEEE Trans Vis Comput Graph. 2014 Mar;20(3):377-90. doi: 10.1109/TVCG.2013.117.

PMID:
24434219
17.

The systemic cytokine environment is permanently altered in multiple myeloma.

Zheng MM, Zhang Z, Bemis K, Belch AR, Pilarski LM, Shively JE, Kirshner J.

PLoS One. 2013;8(3):e58504. doi: 10.1371/journal.pone.0058504. Epub 2013 Mar 27.

18.

The proteome of normal pancreatic juice.

Doyle CJ, Yancey K, Pitt HA, Wang M, Bemis K, Yip-Schneider MT, Sherman ST, Lillemoe KD, Goggins MD, Schmidt CM.

Pancreas. 2012 Mar;41(2):186-94. doi: 10.1097/MPA.0b013e31822862f6.

19.

Proteomic Characterization of Cerebrospinal Fluid from Ataxia-Telangiectasia (A-T) Patients Using a LC/MS-Based Label-Free Protein Quantification Technology.

Dzieciatkowska M, Qi G, You J, Bemis KG, Sahm H, Lederman HM, Crawford TO, Gelbert LM, Rothblum-Oviatt C, Wang M.

Int J Proteomics. 2011;2011:578903. doi: 10.1155/2011/578903. Epub 2011 Jun 23.

20.

Ten-year trends and risk factors for non-O157 Shiga toxin-producing Escherichia coli found through Shiga toxin testing, Connecticut, 2000-2009.

Hadler JL, Clogher P, Hurd S, Phan Q, Mandour M, Bemis K, Marcus R.

Clin Infect Dis. 2011 Aug 1;53(3):269-76. doi: 10.1093/cid/cir377.

PMID:
21765075
21.

Serum proteomic analysis of diet-induced steatohepatitis and metabolic syndrome in the Ossabaw miniature swine.

Bell LN, Lee L, Saxena R, Bemis KG, Wang M, Theodorakis JL, Vuppalanchi R, Alloosh M, Sturek M, Chalasani N.

Am J Physiol Gastrointest Liver Physiol. 2010 May;298(5):G746-54. doi: 10.1152/ajpgi.00485.2009. Epub 2010 Feb 18.

22.

Serum proteomics and biomarker discovery across the spectrum of nonalcoholic fatty liver disease.

Bell LN, Theodorakis JL, Vuppalanchi R, Saxena R, Bemis KG, Wang M, Chalasani N.

Hepatology. 2010 Jan;51(1):111-20. doi: 10.1002/hep.23271.

23.

LC/MS-based quantitative proteomic analysis of paraffin-embedded archival melanomas reveals potential proteomic biomarkers associated with metastasis.

Huang SK, Darfler MM, Nicholl MB, You J, Bemis KG, Tegeler TJ, Wang M, Wery JP, Chong KK, Nguyen L, Scolyer RA, Hoon DS.

PLoS One. 2009;4(2):e4430. doi: 10.1371/journal.pone.0004430. Epub 2009 Feb 16.

24.

Label-free mass spectrometry-based protein quantification technologies in proteomic analysis.

Wang M, You J, Bemis KG, Tegeler TJ, Brown DP.

Brief Funct Genomic Proteomic. 2008 Sep;7(5):329-39. doi: 10.1093/bfgp/eln031. Epub 2008 Jun 25.

PMID:
18579615
25.

A multiple reaction monitoring method for absolute quantification of the human liver alcohol dehydrogenase ADH1C1 isoenzyme.

Janecki DJ, Bemis KG, Tegeler TJ, Sanghani PC, Zhai L, Hurley TD, Bosron WF, Wang M.

Anal Biochem. 2007 Oct 1;369(1):18-26. Epub 2007 Jul 6.

PMID:
17692277
26.

Searching for potential biomarkers of cisplatin resistance in human ovarian cancer using a label-free LC/MS-based protein quantification method.

Fitzpatrick DP, You JS, Bemis KG, Wery JP, Ludwig JR, Wang M.

Proteomics Clin Appl. 2007 Mar;1(3):246-63. doi: 10.1002/prca.200600768. Epub 2007 Jan 22.

PMID:
21136676
27.

Tissue heterogeneity of the mammalian mitochondrial proteome.

Johnson DT, Harris RA, French S, Blair PV, You J, Bemis KG, Wang M, Balaban RS.

Am J Physiol Cell Physiol. 2007 Feb;292(2):C689-97. Epub 2006 Aug 23.

28.

SUM: a new way to incorporate mismatch probe measurements.

Huang S, Wang Y, Chen P, Qian HR, Yeo A, Bemis K.

Genomics. 2004 Oct;84(4):767-77.

PMID:
15475255
29.

Establishment of an ex vivo model of monocytes-derived macrophages differentiated from peripheral blood mononuclear cells (PBMCs) from HIV-1 transgenic rats.

Mazzucchelli R, Amadio M, Curreli S, Denaro F, Bemis K, Reid W, Bryant J, Riva A, Galli M, Zella D.

Mol Immunol. 2004 Aug;41(10):979-84.

PMID:
15302160
30.

Phencyclidine-induced changes in rat cortical gene expression identified by microarray analysis: implications for schizophrenia.

Kaiser S, Foltz LA, George CA, Kirkwood SC, Bemis KG, Lin X, Gelbert LM, Nisenbaum LK.

Neurobiol Dis. 2004 Jun;16(1):220-35.

PMID:
15207279
31.

At what scale should microarray data be analyzed?

Huang S, Yeo AA, Gelbert L, Lin X, Nisenbaum L, Bemis KG.

Am J Pharmacogenomics. 2004;4(2):129-39.

PMID:
15059035
32.

Assessing the variability in GeneChip data.

Huang S, Qian HR, Geringer C, Love C, Gelbert L, Bemis K.

Am J Pharmacogenomics. 2003;3(4):279-90.

PMID:
12930160
33.

Human primary CD4 + T cells activated in the presence of IFN-alpha 2b express functional indoleamine 2,3-dioxygenase.

Curreli S, Romerio F, Mirandola P, Barion P, Bemis K, Zella D.

J Interferon Cytokine Res. 2001 Jun;21(6):431-7.

PMID:
11440641
34.
35.

Kinetic analysis of LY320236: competitive inhibitor of type I and non-competitive inhibitor of type II human steroid 5alpha-reductase.

McNulty AM, Audia JE, Bemis KG, Goode RL, Rocco VP, Neubauer BL.

J Steroid Biochem Mol Biol. 2000 Jan-Feb;72(1-2):13-21.

PMID:
10731633
36.

Human herpesvirus 7 infection induces profound cell cycle perturbations coupled to disregulation of cdc2 and cyclin B and polyploidization of CD4(+) T cells.

Secchiero P, Bertolaso L, Casareto L, Gibellini D, Vitale M, Bemis K, Aleotti A, Capitani S, Franchini G, Gallo RC, Zauli G.

Blood. 1998 Sep 1;92(5):1685-96.

PMID:
9716597
37.

Enforced expression of human bcl-2 in CD4+ T cells enhances human herpesvirus 7 replication and induction of cytopathic effects.

Secchiero P, Bertolaso L, Gibellini D, Ricci D, Bemis K, Capitani S, Gallo RC, Zauli G.

Eur J Immunol. 1998 May;28(5):1587-96.

38.

Advantages of raloxifene over alendronate or estrogen on nonreproductive and reproductive tissues in the long-term dosing of ovariectomized rats.

Sato M, Bryant HU, Iversen P, Helterbrand J, Smietana F, Bemis K, Higgs R, Turner CH, Owan I, Takano Y, Burr DB.

J Pharmacol Exp Ther. 1996 Oct;279(1):298-305.

PMID:
8859007
41.

General pharmacology of gemcitabine hydrochloride in animals.

Turk J, Bemis K, Colbert W, Heim R, Helton D, Rush G, Shannon H, Shetler T, Todd G, Wilson B.

Arzneimittelforschung. 1994 Sep;44(9):1089-92.

PMID:
7986250
42.

Comparative QSAR studies of two series of 1,4-dihydropyridines as slow calcium channel blockers.

Wikel JH, Bemis KG, Kurz K, Denney ML, Main BW, Moore RA, Smith T, Shingleton L, Holland DR.

Drug Des Discov. 1994 Jan;11(1):1-14.

PMID:
8068815
43.

Purification and kinetic characterization of human cytomegalovirus assemblin.

Smith MC, Giordano J, Cook JA, Wakulchik M, Villarreal EC, Becker GW, Bemis K, Labus J, Manetta JS.

Methods Enzymol. 1994;244:412-23. No abstract available.

PMID:
7845223
44.
45.

Muscarinic M1 receptor agonist actions of muscarinic receptor agonists in rabbit vas deferens.

Shannon HE, Sawyer BD, Bemis KG, Bymaster FP, Health I, Mitch CH, Ward JS.

Eur J Pharmacol. 1993 Feb 23;232(1):47-57.

PMID:
8458395
46.

Porcine pancreatic phospholipase A2-induced contractions of guinea pig lung pleural strips.

Sommers CD, Bobbitt JL, Bemis KG, Snyder DW.

Eur J Pharmacol. 1992 May 27;216(1):87-96.

PMID:
1526256
47.

Potency and efficacy of dopamine agonists in mouse strains differing in dopamine cell and receptor number.

Shannon HE, Bemis KG, Peters SC.

Pharmacol Biochem Behav. 1991 Sep;40(1):103-7.

PMID:
1685781
48.
49.

Effects of oral pergolide mesylate on nociceptive spinal cord reflexes in rats.

Shannon HE, Bemis KG, Peters SC.

Life Sci. 1991;48(23):2243-8.

PMID:
2046457
50.

Chiral recognition of pinacidil and its 3-pyridyl isomer by canine cardiac and smooth muscle: antagonism by sulfonylureas.

Steinberg MI, Wiest SA, Zimmerman KM, Ertel PJ, Bemis KG, Robertson DW.

J Pharmacol Exp Ther. 1991 Jan;256(1):222-9.

PMID:
1899116

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