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Items: 28

1.

Tissue patrol by resident memory CD8+ T cells in human skin.

Dijkgraaf FE, Matos TR, Hoogenboezem M, Toebes M, Vredevoogd DW, Mertz M, van den Broek B, Song JY, Teunissen MBM, Luiten RM, Beltman JB, Schumacher TN.

Nat Immunol. 2019 Jun;20(6):756-764. doi: 10.1038/s41590-019-0404-3. Epub 2019 May 20.

PMID:
31110315
2.

Contact-Dependent Killing by Cytotoxic T Lymphocytes Is Insufficient for EL4 Tumor Regression In Vivo.

Beck RJ, Slagter M, Beltman JB.

Cancer Res. 2019 Jul 1;79(13):3406-3416. doi: 10.1158/0008-5472.CAN-18-3147. Epub 2019 Apr 30.

PMID:
31040155
3.

Single-cell imaging of CAR T cell activity in vivo reveals extensive functional and anatomical heterogeneity.

Cazaux M, Grandjean CL, Lemaître F, Garcia Z, Beck RJ, Milo I, Postat J, Beltman JB, Cheadle EJ, Bousso P.

J Exp Med. 2019 May 6;216(5):1038-1049. doi: 10.1084/jem.20182375. Epub 2019 Apr 1.

PMID:
30936262
4.

A systematic analysis of Nrf2 pathway activation dynamics during repeated xenobiotic exposure.

Bischoff LJM, Kuijper IA, Schimming JP, Wolters L, Braak BT, Langenberg JP, Noort D, Beltman JB, van de Water B.

Arch Toxicol. 2019 Feb;93(2):435-451. doi: 10.1007/s00204-018-2353-2. Epub 2018 Nov 20.

PMID:
30456486
5.

Heritable tumor cell division rate heterogeneity induces clonal dominance.

Palm MM, Elemans M, Beltman JB.

PLoS Comput Biol. 2018 Feb 12;14(2):e1005954. doi: 10.1371/journal.pcbi.1005954. eCollection 2018 Feb.

6.

Deciphering Epithelial-Mesenchymal Transition Regulatory Networks in Cancer through Computational Approaches.

Burger GA, Danen EHJ, Beltman JB.

Front Oncol. 2017 Aug 3;7:162. doi: 10.3389/fonc.2017.00162. eCollection 2017. Review.

7.

A Sigmoid Functional Response Emerges When Cytotoxic T Lymphocytes Start Killing Fresh Target Cells.

Gadhamsetty S, Marée AFM, Beltman JB, de Boer RJ.

Biophys J. 2017 Mar 28;112(6):1221-1235. doi: 10.1016/j.bpj.2017.02.008.

8.

Tissue Dimensionality Influences the Functional Response of Cytotoxic T Lymphocyte-Mediated Killing of Targets.

Gadhamsetty S, Marée AF, de Boer RJ, Beltman JB.

Front Immunol. 2017 Jan 11;7:668. doi: 10.3389/fimmu.2016.00668. eCollection 2016.

9.

Combination Approaches with Immune-Checkpoint Blockade in Cancer Therapy.

Swart M, Verbrugge I, Beltman JB.

Front Oncol. 2016 Nov 1;6:233. eCollection 2016. Review.

10.

Unraveling cellular pathways contributing to drug-induced liver injury by dynamical modeling.

Kuijper IA, Yang H, Van De Water B, Beltman JB.

Expert Opin Drug Metab Toxicol. 2017 Jan;13(1):5-17. Epub 2016 Sep 23. Review.

PMID:
27609146
11.

Reproducibility of Illumina platform deep sequencing errors allows accurate determination of DNA barcodes in cells.

Beltman JB, Urbanus J, Velds A, van Rooij N, Rohr JC, Naik SH, Schumacher TN.

BMC Bioinformatics. 2016 Apr 2;17:151. doi: 10.1186/s12859-016-0999-4.

12.

Subtle CXCR3-Dependent Chemotaxis of CTLs within Infected Tissue Allows Efficient Target Localization.

Ariotti S, Beltman JB, Borsje R, Hoekstra ME, Halford WP, Haanen JB, de Boer RJ, Schumacher TN.

J Immunol. 2015 Dec 1;195(11):5285-95. doi: 10.4049/jimmunol.1500853. Epub 2015 Nov 2.

13.

What do mathematical models tell us about killing rates during HIV-1 infection?

Gadhamsetty S, Beltman JB, de Boer RJ.

Immunol Lett. 2015 Nov;168(1):1-6. doi: 10.1016/j.imlet.2015.07.009. Epub 2015 Aug 13. Review.

14.

Random migration and signal integration promote rapid and robust T cell recruitment.

Textor J, Henrickson SE, Mandl JN, von Andrian UH, Westermann J, de Boer RJ, Beltman JB.

PLoS Comput Biol. 2014 Aug 7;10(8):e1003752. doi: 10.1371/journal.pcbi.1003752. eCollection 2014 Aug.

15.

A general functional response of cytotoxic T lymphocyte-mediated killing of target cells.

Gadhamsetty S, Marée AF, Beltman JB, de Boer RJ.

Biophys J. 2014 Apr 15;106(8):1780-91. doi: 10.1016/j.bpj.2014.01.048.

16.

Heterogeneous differentiation patterns of individual CD8+ T cells.

Gerlach C, Rohr JC, Perié L, van Rooij N, van Heijst JW, Velds A, Urbanus J, Naik SH, Jacobs H, Beltman JB, de Boer RJ, Schumacher TN.

Science. 2013 May 3;340(6132):635-9. doi: 10.1126/science.1235487. Epub 2013 Mar 14.

17.

Chemotactic migration of T cells towards dendritic cells promotes the detection of rare antigens.

Vroomans RM, Marée AF, de Boer RJ, Beltman JB.

PLoS Comput Biol. 2012;8(11):e1002763. doi: 10.1371/journal.pcbi.1002763. Epub 2012 Nov 15.

18.

Tissue-resident memory CD8+ T cells continuously patrol skin epithelia to quickly recognize local antigen.

Ariotti S, Beltman JB, Chodaczek G, Hoekstra ME, van Beek AE, Gomez-Eerland R, Ritsma L, van Rheenen J, Marée AF, Zal T, de Boer RJ, Haanen JB, Schumacher TN.

Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19739-44. doi: 10.1073/pnas.1208927109. Epub 2012 Nov 12.

19.

TIL therapy broadens the tumor-reactive CD8(+) T cell compartment in melanoma patients.

Kvistborg P, Shu CJ, Heemskerk B, Fankhauser M, Thrue CA, Toebes M, van Rooij N, Linnemann C, van Buuren MM, Urbanus JH, Beltman JB, Thor Straten P, Li YF, Robbins PF, Besser MJ, Schachter J, Kenter GG, Dudley ME, Rosenberg SA, Haanen JB, Hadrup SR, Schumacher TN.

Oncoimmunology. 2012 Jul 1;1(4):409-418.

20.

B cells within germinal centers migrate preferentially from dark to light zone.

Beltman JB, Allen CD, Cyster JG, de Boer RJ.

Proc Natl Acad Sci U S A. 2011 May 24;108(21):8755-60. doi: 10.1073/pnas.1101554108. Epub 2011 May 9.

21.

Analysing immune cell migration.

Beltman JB, Marée AF, de Boer RJ.

Nat Rev Immunol. 2009 Nov;9(11):789-98. doi: 10.1038/nri2638. Epub 2009 Oct 16. Review.

PMID:
19834485
22.

Towards estimating the true duration of dendritic cell interactions with T cells.

Beltman JB, Henrickson SE, von Andrian UH, de Boer RJ, Marée AF.

J Immunol Methods. 2009 Aug 15;347(1-2):54-69. doi: 10.1016/j.jim.2009.05.013. Epub 2009 Jun 9.

23.

Spatial modelling of brief and long interactions between T cells and dendritic cells.

Beltman JB, Marée AF, de Boer RJ.

Immunol Cell Biol. 2007 Jun;85(4):306-14. Epub 2007 Apr 10.

PMID:
17420768
24.

Lymph node topology dictates T cell migration behavior.

Beltman JB, Marée AF, Lynch JN, Miller MJ, de Boer RJ.

J Exp Med. 2007 Apr 16;204(4):771-80. Epub 2007 Mar 26.

25.

Speciation: more likely through a genetic or through a learned habitat preference?

Beltman JB, Metz JA.

Proc Biol Sci. 2005 Jul 22;272(1571):1455-63.

26.

Speciation through the learning of habitat features.

Beltman JB, Haccou P.

Theor Popul Biol. 2005 May;67(3):189-202.

PMID:
15808336
27.

Learning and colonization of new niches: a first step toward speciation.

Beltman JB, Haccou P, ten Cate C.

Evolution. 2004 Jan;58(1):35-46.

PMID:
15058717
28.

MHC polymorphism under host-pathogen coevolution.

Borghans JA, Beltman JB, De Boer RJ.

Immunogenetics. 2004 Feb;55(11):732-9. Epub 2004 Jan 13.

PMID:
14722687

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