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Items: 39

1.

Variable Baseline Papio cynocephalus Endogenous Retrovirus (PcEV) Expression Is Upregulated in Acutely SIV-Infected Macaques and Correlated to STAT1 Expression in the Spleen.

Maze EA, Ham C, Kelly J, Ussher L, Almond N, Towers GJ, Berry N, Belshaw R.

Front Immunol. 2019 May 15;10:901. doi: 10.3389/fimmu.2019.00901. eCollection 2019.

2.

Systematic Analysis and Biomarker Study for Alzheimer's Disease.

Li X, Wang H, Long J, Pan G, He T, Anichtchik O, Belshaw R, Albani D, Edison P, Green EK, Scott J.

Sci Rep. 2018 Nov 26;8(1):17394. doi: 10.1038/s41598-018-35789-3.

3.

Overlapping genes and the proteins they encode differ significantly in their sequence composition from non-overlapping genes.

Pavesi A, Vianelli A, Chirico N, Bao Y, Blinkova O, Belshaw R, Firth A, Karlin D.

PLoS One. 2018 Oct 19;13(10):e0202513. doi: 10.1371/journal.pone.0202513. eCollection 2018.

4.

Discovery of Novel Biomarkers for Alzheimer's Disease from Blood.

Long J, Pan G, Ifeachor E, Belshaw R, Li X.

Dis Markers. 2016;2016:4250480. doi: 10.1155/2016/4250480. Epub 2016 May 29.

5.

Integrated genomic approaches identify major pathways and upstream regulators in late onset Alzheimer's disease.

Li X, Long J, He T, Belshaw R, Scott J.

Sci Rep. 2015 Jul 23;5:12393. doi: 10.1038/srep12393.

6.

The decline of human endogenous retroviruses: extinction and survival.

Magiorkinis G, Blanco-Melo D, Belshaw R.

Retrovirology. 2015 Feb 2;12:8. doi: 10.1186/s12977-015-0136-x.

7.

Larger mammalian body size leads to lower retroviral activity.

Katzourakis A, Magiorkinis G, Lim AG, Gupta S, Belshaw R, Gifford R.

PLoS Pathog. 2014 Jul 17;10(7):e1004214. doi: 10.1371/journal.ppat.1004214. eCollection 2014 Jul.

8.

Unfixed endogenous retroviral insertions in the human population.

Marchi E, Kanapin A, Magiorkinis G, Belshaw R.

J Virol. 2014 Sep 1;88(17):9529-37. doi: 10.1128/JVI.00919-14. Epub 2014 Jun 11.

9.

Neanderthal and Denisovan retroviruses in modern humans.

Marchi E, Kanapin A, Byott M, Magiorkinis G, Belshaw R.

Curr Biol. 2013 Nov 18;23(22):R994-R995. doi: 10.1016/j.cub.2013.10.028. No abstract available.

10.

'There and back again': revisiting the pathophysiological roles of human endogenous retroviruses in the post-genomic era.

Magiorkinis G, Belshaw R, Katzourakis A.

Philos Trans R Soc Lond B Biol Sci. 2013 Aug 12;368(1626):20120504. doi: 10.1098/rstb.2012.0504. Print 2013 Sep 19. Review.

11.

Integrating phylodynamics and epidemiology to estimate transmission diversity in viral epidemics.

Magiorkinis G, Sypsa V, Magiorkinis E, Paraskevis D, Katsoulidou A, Belshaw R, Fraser C, Pybus OG, Hatzakis A.

PLoS Comput Biol. 2013;9(1):e1002876. doi: 10.1371/journal.pcbi.1002876. Epub 2013 Jan 31.

12.

Dating the origin and dispersal of hepatitis B virus infection in humans and primates.

Paraskevis D, Magiorkinis G, Magiorkinis E, Ho SY, Belshaw R, Allain JP, Hatzakis A.

Hepatology. 2013 Mar;57(3):908-16. doi: 10.1002/hep.26079. Epub 2013 Feb 7.

PMID:
22987324
13.

Env-less endogenous retroviruses are genomic superspreaders.

Magiorkinis G, Gifford RJ, Katzourakis A, De Ranter J, Belshaw R.

Proc Natl Acad Sci U S A. 2012 May 8;109(19):7385-90. doi: 10.1073/pnas.1200913109. Epub 2012 Apr 23.

14.

Viral mutation and substitution: units and levels.

Belshaw R, Sanjuán R, Pybus OG.

Curr Opin Virol. 2011 Nov;1(5):430-5. doi: 10.1016/j.coviro.2011.08.004. Epub 2011 Sep 15. Review.

PMID:
22440847
15.
16.

Viral mutation rates.

Sanjuán R, Nebot MR, Chirico N, Mansky LM, Belshaw R.

J Virol. 2010 Oct;84(19):9733-48. doi: 10.1128/JVI.00694-10. Epub 2010 Jul 21. Review.

17.

Why genes overlap in viruses.

Chirico N, Vianelli A, Belshaw R.

Proc Biol Sci. 2010 Dec 22;277(1701):3809-17. doi: 10.1098/rspb.2010.1052. Epub 2010 Jul 7.

18.

The RNA virus database.

Belshaw R, de Oliveira T, Markowitz S, Rambaut A.

Nucleic Acids Res. 2009 Jan;37(Database issue):D431-5. doi: 10.1093/nar/gkn729. Epub 2008 Oct 23.

19.

Conserved footprints of APOBEC3G on Hypermutated human immunodeficiency virus type 1 and human endogenous retrovirus HERV-K(HML2) sequences.

Armitage AE, Katzourakis A, de Oliveira T, Welch JJ, Belshaw R, Bishop KN, Kramer B, McMichael AJ, Rambaut A, Iversen AK.

J Virol. 2008 Sep;82(17):8743-61. doi: 10.1128/JVI.00584-08. Epub 2008 Jun 18.

20.

Pacing a small cage: mutation and RNA viruses.

Belshaw R, Gardner A, Rambaut A, Pybus OG.

Trends Ecol Evol. 2008 Apr;23(4):188-93. doi: 10.1016/j.tree.2007.11.010. Epub 2008 Mar 4.

PMID:
18295930
21.

Anti-CCP antibodies as an aid to prioritization of patients referred to the rheumatology clinic.

Madan A, Belshaw R, Grennan D.

QJM. 2007 Nov;100(11):737-8. Epub 2007 Oct 19. No abstract available.

PMID:
17951317
22.

The evolution of genome compression and genomic novelty in RNA viruses.

Belshaw R, Pybus OG, Rambaut A.

Genome Res. 2007 Oct;17(10):1496-504. Epub 2007 Sep 4.

23.

Rate of recombinational deletion among human endogenous retroviruses.

Belshaw R, Watson J, Katzourakis A, Howe A, Woolven-Allen J, Burt A, Tristem M.

J Virol. 2007 Sep;81(17):9437-42. Epub 2007 Jun 20.

24.

Phylogenetic evidence for deleterious mutation load in RNA viruses and its contribution to viral evolution.

Pybus OG, Rambaut A, Belshaw R, Freckleton RP, Drummond AJ, Holmes EC.

Mol Biol Evol. 2007 Mar;24(3):845-52. Epub 2007 Jan 11.

PMID:
17218639
25.

The rise and falls of introns.

Belshaw R, Bensasson D.

Heredity (Edinb). 2006 Mar;96(3):208-13. Review.

26.
27.

High copy number in human endogenous retrovirus families is associated with copying mechanisms in addition to reinfection.

Belshaw R, Katzourakis A, Paces J, Burt A, Tristem M.

Mol Biol Evol. 2005 Apr;22(4):814-7. Epub 2005 Jan 19.

PMID:
15659556
28.

BlastAlign: a program that uses blast to align problematic nucleotide sequences.

Belshaw R, Katzourakis A.

Bioinformatics. 2005 Jan 1;21(1):122-3. Epub 2004 Aug 13.

PMID:
15310559
29.

Long-term reinfection of the human genome by endogenous retroviruses.

Belshaw R, Pereira V, Katzourakis A, Talbot G, Paces J, Burt A, Tristem M.

Proc Natl Acad Sci U S A. 2004 Apr 6;101(14):4894-9. Epub 2004 Mar 25.

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35.

Noise and incongruence: interpreting results of the incongruence length difference test.

Dolphin K, Belshaw R, Orme CD, Quicke DL.

Mol Phylogenet Evol. 2000 Dec;17(3):401-6.

PMID:
11133194
36.

Estimating ancestral geographical distributions: a Gondwanan origin for aphid parasitoids?

Belshaw R, Dowton M, Quicke DL, Austin AD.

Proc Biol Sci. 2000 Mar 7;267(1442):491-6.

37.

MOLECULAR MARKERS INDICATE RARE SEX IN A PREDOMINANTLY ASEXUAL PARASITOID WASP.

Belshaw R, Quicke DLJ, Völkl W, Godfray HCJ.

Evolution. 1999 Aug;53(4):1189-1199. doi: 10.1111/j.1558-5646.1999.tb04532.x.

PMID:
28565514
38.
39.

A molecular phylogeny of the Aphidiinae (Hymenoptera: Braconidae).

Belshaw R, Quicke DL.

Mol Phylogenet Evol. 1997 Jun;7(3):281-93.

PMID:
9187088

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