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Items: 43

1.

Membrane proteins significantly restrict exosome mobility.

Skliar M, Chernyshev VS, Belnap DM, Sergey GV, Al-Hakami SM, Bernard PS, Stijleman IJ, Rachamadugu R.

Biochem Biophys Res Commun. 2018 Jul 2;501(4):1055-1059. doi: 10.1016/j.bbrc.2018.05.107. Epub 2018 May 19.

PMID:
29777705
2.

The Neuronal Gene Arc Encodes a Repurposed Retrotransposon Gag Protein that Mediates Intercellular RNA Transfer.

Pastuzyn ED, Day CE, Kearns RB, Kyrke-Smith M, Taibi AV, McCormick J, Yoder N, Belnap DM, Erlendsson S, Morado DR, Briggs JAG, Feschotte C, Shepherd JD.

Cell. 2018 Mar 22;173(1):275. doi: 10.1016/j.cell.2018.03.024. No abstract available.

3.

The Neuronal Gene Arc Encodes a Repurposed Retrotransposon Gag Protein that Mediates Intercellular RNA Transfer.

Pastuzyn ED, Day CE, Kearns RB, Kyrke-Smith M, Taibi AV, McCormick J, Yoder N, Belnap DM, Erlendsson S, Morado DR, Briggs JAG, Feschotte C, Shepherd JD.

Cell. 2018 Jan 11;172(1-2):275-288.e18. doi: 10.1016/j.cell.2017.12.024. Erratum in: Cell. 2018 Mar 22;173(1):275.

4.

Designed proteins induce the formation of nanocage-containing extracellular vesicles.

Votteler J, Ogohara C, Yi S, Hsia Y, Nattermann U, Belnap DM, King NP, Sundquist WI.

Nature. 2016 Dec 8;540(7632):292-295. doi: 10.1038/nature20607. Epub 2016 Nov 30.

5.

Electron Microscopy and Image Processing: Essential Tools for Structural Analysis of Macromolecules.

Belnap DM.

Curr Protoc Protein Sci. 2015 Nov 2;82:17.2.1-61. doi: 10.1002/0471140864.ps1702s82.

PMID:
26521712
6.

Size and shape characterization of hydrated and desiccated exosomes.

Chernyshev VS, Rachamadugu R, Tseng YH, Belnap DM, Jia Y, Branch KJ, Butterfield AE, Pease LF 3rd, Bernard PS, Skliar M.

Anal Bioanal Chem. 2015 May;407(12):3285-301. doi: 10.1007/s00216-015-8535-3. Epub 2015 Mar 28.

PMID:
25821114
7.

Nectin-like interactions between poliovirus and its receptor trigger conformational changes associated with cell entry.

Strauss M, Filman DJ, Belnap DM, Cheng N, Noel RT, Hogle JM.

J Virol. 2015 Apr;89(8):4143-57. doi: 10.1128/JVI.03101-14. Epub 2015 Jan 28.

8.

The genomes, proteomes, and structures of three novel phages that infect the Bacillus cereus group and carry putative virulence factors.

Grose JH, Belnap DM, Jensen JD, Mathis AD, Prince JT, Merrill BD, Burnett SH, Breakwell DP.

J Virol. 2014 Oct;88(20):11846-60. doi: 10.1128/JVI.01364-14. Epub 2014 Aug 6.

9.

Ultrasound sensitive eLiposomes containing doxorubicin for drug targeting therapy.

Lin CY, Javadi M, Belnap DM, Barrow JR, Pitt WG.

Nanomedicine. 2014 Jan;10(1):67-76. doi: 10.1016/j.nano.2013.06.011. Epub 2013 Jul 9.

PMID:
23845926
10.

Conformational shift of a major poliovirus antigen confirmed by immuno-cryogenic electron microscopy.

Lin J, Cheng N, Hogle JM, Steven AC, Belnap DM.

J Immunol. 2013 Jul 15;191(2):884-91. doi: 10.4049/jimmunol.1202014. Epub 2013 Jun 14.

11.

Ultrasound-induced calcein release from eLiposomes.

Lattin JR, Pitt WG, Belnap DM, Husseini GA.

Ultrasound Med Biol. 2012 Dec;38(12):2163-73. doi: 10.1016/j.ultrasmedbio.2012.08.001. Epub 2012 Oct 11.

PMID:
23062373
12.

Encapsulating nanoemulsions inside eLiposomes for ultrasonic drug delivery.

Javadi M, Pitt WG, Belnap DM, Tsosie NH, Hartley JM.

Langmuir. 2012 Oct 16;28(41):14720-9. doi: 10.1021/la303464v. Epub 2012 Oct 4.

PMID:
22989347
13.

Sequence and structural characterization of great salt lake bacteriophage CW02, a member of the T7-like supergroup.

Shen PS, Domek MJ, Sanz-García E, Makaju A, Taylor RM, Hoggan R, Culumber MD, Oberg CJ, Breakwell DP, Prince JT, Belnap DM.

J Virol. 2012 Aug;86(15):7907-17. doi: 10.1128/JVI.00407-12. Epub 2012 May 16.

14.

Structure of the Fab-labeled "breathing" state of native poliovirus.

Lin J, Lee LY, Roivainen M, Filman DJ, Hogle JM, Belnap DM.

J Virol. 2012 May;86(10):5959-62. doi: 10.1128/JVI.05990-11. Epub 2012 Mar 7.

15.

Formation of eLiposomes as a drug delivery vehicle.

Lattin JR, Belnap DM, Pitt WG.

Colloids Surf B Biointerfaces. 2012 Jan 1;89:93-100. doi: 10.1016/j.colsurfb.2011.08.030. Epub 2011 Sep 14.

PMID:
21962853
16.

An externalized polypeptide partitions between two distinct sites on genome-released poliovirus particles.

Lin J, Cheng N, Chow M, Filman DJ, Steven AC, Hogle JM, Belnap DM.

J Virol. 2011 Oct;85(19):9974-83. doi: 10.1128/JVI.05013-11. Epub 2011 Jul 20.

17.

The structure of avian polyomavirus reveals variably sized capsids, non-conserved inter-capsomere interactions, and a possible location of the minor capsid protein VP4.

Shen PS, Enderlein D, Nelson CD, Carter WS, Kawano M, Xing L, Swenson RD, Olson NH, Baker TS, Cheng RH, Atwood WJ, Johne R, Belnap DM.

Virology. 2011 Mar 1;411(1):142-52. doi: 10.1016/j.virol.2010.12.005. Epub 2011 Jan 15.

18.

The random-model method enables ab initio 3D reconstruction of asymmetric particles and determination of particle symmetry.

Sanz-García E, Stewart AB, Belnap DM.

J Struct Biol. 2010 Aug;171(2):216-22. doi: 10.1016/j.jsb.2010.03.017. Epub 2010 Mar 28.

19.

Selective trapping and concentration of nanoparticles and viruses in dual-height nanofluidic channels.

Hamblin MN, Xuan J, Maynes D, Tolley HD, Belnap DM, Woolley AT, Lee ML, Hawkins AR.

Lab Chip. 2010 Jan 21;10(2):173-8. doi: 10.1039/b916746c. Epub 2009 Nov 18.

PMID:
20066244
20.

Large structural change in isolated synaptic vesicles upon loading with neurotransmitter.

Budzinski KL, Allen RW, Fujimoto BS, Kensel-Hammes P, Belnap DM, Bajjalieh SM, Chiu DT.

Biophys J. 2009 Nov 4;97(9):2577-84. doi: 10.1016/j.bpj.2009.08.032.

21.

Characterization of Pseudomonas chlororaphis myovirus 201varphi2-1 via genomic sequencing, mass spectrometry, and electron microscopy.

Thomas JA, Rolando MR, Carroll CA, Shen PS, Belnap DM, Weintraub ST, Serwer P, Hardies SC.

Virology. 2008 Jul 5;376(2):330-8. doi: 10.1016/j.virol.2008.04.004. Epub 2008 May 13.

22.

Bsoft: image processing and molecular modeling for electron microscopy.

Heymann JB, Belnap DM.

J Struct Biol. 2007 Jan;157(1):3-18. Epub 2006 Jun 28.

PMID:
17011211
23.

Epitope diversity of hepatitis B virus capsids: quasi-equivalent variations in spike epitopes and binding of different antibodies to the same epitope.

Harris A, Belnap DM, Watts NR, Conway JF, Cheng N, Stahl SJ, Vethanayagam JG, Wingfield PT, Steven AC.

J Mol Biol. 2006 Jan 20;355(3):562-76. Epub 2005 Nov 8.

PMID:
16309704
24.

Structure, assembly, and antigenicity of hepatitis B virus capsid proteins.

Steven AC, Conway JF, Cheng N, Watts NR, Belnap DM, Harris A, Stahl SJ, Wingfield PT.

Adv Virus Res. 2005;64:125-64. No abstract available.

PMID:
16139594
25.

Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology.

Heymann JB, Chagoyen M, Belnap DM.

J Struct Biol. 2005 Aug;151(2):196-207. Erratum in: J Struct Biol. 2006 Mar;153(3):312.

PMID:
16043364
26.
27.

Visualization of the binding of Hsc70 ATPase to clathrin baskets: implications for an uncoating mechanism.

Heymann JB, Iwasaki K, Yim YI, Cheng N, Belnap DM, Greene LE, Eisenberg E, Steven AC.

J Biol Chem. 2005 Feb 25;280(8):7156-61. Epub 2004 Dec 13.

28.

Three-dimensional structure of herpes simplex virus from cryo-electron tomography.

Grünewald K, Desai P, Winkler DC, Heymann JB, Belnap DM, Baumeister W, Steven AC.

Science. 2003 Nov 21;302(5649):1396-8.

29.

Diversity of core antigen epitopes of hepatitis B virus.

Belnap DM, Watts NR, Conway JF, Cheng N, Stahl SJ, Wingfield PT, Steven AC.

Proc Natl Acad Sci U S A. 2003 Sep 16;100(19):10884-9. Epub 2003 Sep 3.

30.

Characterization of a conformational epitope on hepatitis B virus core antigen and quasiequivalent variations in antibody binding.

Conway JF, Watts NR, Belnap DM, Cheng N, Stahl SJ, Wingfield PT, Steven AC.

J Virol. 2003 Jun;77(11):6466-73.

31.

Handedness of the herpes simplex virus capsid and procapsid.

Cheng N, Trus BL, Belnap DM, Newcomb WW, Brown JC, Steven AC.

J Virol. 2002 Aug;76(15):7855-9.

32.

The morphogenic linker peptide of HBV capsid protein forms a mobile array on the interior surface.

Watts NR, Conway JF, Cheng N, Stahl SJ, Belnap DM, Steven AC, Wingfield PT.

EMBO J. 2002 Mar 1;21(5):876-84.

33.

'Déjà vu all over again': the similar structures of bacteriophage PRD1 and adenovirus.

Belnap DM, Steven AC.

Trends Microbiol. 2000 Mar;8(3):91-3. No abstract available.

PMID:
10707053
34.

Molecular tectonic model of virus structural transitions: the putative cell entry states of poliovirus.

Belnap DM, Filman DJ, Trus BL, Cheng N, Booy FP, Conway JF, Curry S, Hiremath CN, Tsang SK, Steven AC, Hogle JM.

J Virol. 2000 Feb;74(3):1342-54.

35.

Three-dimensional structure of poliovirus receptor bound to poliovirus.

Belnap DM, McDermott BM Jr, Filman DJ, Cheng N, Trus BL, Zuccola HJ, Racaniello VR, Hogle JM, Steven AC.

Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):73-8.

37.

Low-resolution density maps from atomic models: how stepping "back" can be a step "forward".

Belnap DM, Kumar A, Folk JT, Smith TJ, Baker TS.

J Struct Biol. 1999 Apr-May;125(2-3):166-75.

PMID:
10222272
38.

At sixes and sevens: characterization of the symmetry mismatch of the ClpAP chaperone-assisted protease.

Beuron F, Maurizi MR, Belnap DM, Kocsis E, Booy FP, Kessel M, Steven AC.

J Struct Biol. 1998 Nov;123(3):248-59.

PMID:
9878579
39.

Structural invariance of constitutively active and inactive mutants of acanthamoeba myosin IC bound to F-actin in the rigor and ADP-bound states.

Carragher BO, Cheng N, Wang ZY, Korn ED, Reilein A, Belnap DM, Hammer JA 3rd, Steven AC.

Proc Natl Acad Sci U S A. 1998 Dec 22;95(26):15206-11.

40.

Hepatitis B virus capsid: localization of the putative immunodominant loop (residues 78 to 83) on the capsid surface, and implications for the distinction between c and e-antigens.

Conway JF, Cheng N, Zlotnick A, Stahl SJ, Wingfield PT, Belnap DM, Kanngiesser U, Noah M, Steven AC.

J Mol Biol. 1998 Jun 26;279(5):1111-21.

PMID:
9642088
41.

A method for establishing the handedness of biological macromolecules.

Belnap DM, Olson NH, Baker TS.

J Struct Biol. 1997 Oct;120(1):44-51.

PMID:
9356290
42.

Conserved features in papillomavirus and polyomavirus capsids.

Belnap DM, Olson NH, Cladel NM, Newcomb WW, Brown JC, Kreider JW, Christensen ND, Baker TS.

J Mol Biol. 1996 Jun 7;259(2):249-63.

43.

Use of radial density plots to calibrate image magnification for frozen-hydrated specimens.

Belnap DM, Grochulski WD, Olson NH, Baker TS.

Ultramicroscopy. 1993 Mar;48(3):347-58.

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