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Items: 4

1.

Whole genome sequencing and variant discovery in the ASPIRE autism spectrum disorder cohort.

Callaghan DB, Rogic S, Tan PPC, Calli K, Qiao Y, Baldwin R, Jacobson M, Belmadani M, Holmes N, Yu C, Li Y, Li Y, Kurtzke FE, Kuzeljevic B, Yu AY, Hudson M, Mcaughton AJM, Xu Y, Dionne-Laporte A, Girard S, Liang P, Separovic ER, Liu X, Rouleau G, Pavlidis P, Lewis MES.

Clin Genet. 2019 Sep;96(3):199-206. doi: 10.1111/cge.13556. Epub 2019 May 30.

PMID:
31038196
2.

Assessing Transcriptome Quality in Patch-Seq Datasets.

Tripathy SJ, Toker L, Bomkamp C, Mancarci BO, Belmadani M, Pavlidis P.

Front Mol Neurosci. 2018 Oct 8;11:363. doi: 10.3389/fnmol.2018.00363. eCollection 2018.

3.

A comprehensive analysis of 3' end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation.

Gruber AJ, Schmidt R, Gruber AR, Martin G, Ghosh S, Belmadani M, Keller W, Zavolan M.

Genome Res. 2016 Aug;26(8):1145-59. doi: 10.1101/gr.202432.115. Epub 2016 Jul 5.

4.

Interactive Exploration, Analysis, and Visualization of Complex Phenome-Genome Datasets with ASPIREdb.

Tan PP, Rogic S, Zoubarev A, McDonald C, Lui F, Charathsandran G, Jacobson M, Belmadani M, Leong J, Van Rossum T, Portales-Casamar E, Qiao Y, Calli K, Liu X, Hudson M, Rajcan-Separovic E, Lewis MS, Pavlidis P.

Hum Mutat. 2016 Aug;37(8):719-26. doi: 10.1002/humu.23011. Epub 2016 May 20.

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