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Items: 33

1.

Criticality Maximizes Complexity in Neural Tissue.

Timme NM, Marshall NJ, Bennett N, Ripp M, Lautzenhiser E, Beggs JM.

Front Physiol. 2016 Sep 27;7:425. eCollection 2016.

2.

Domoic acid disrupts the activity and connectivity of neuronal networks in organotypic brain slice cultures.

Hiolski EM, Ito S, Beggs JM, Lefebvre KA, Litke AM, Smith DR.

Neurotoxicology. 2016 Sep;56:215-224. doi: 10.1016/j.neuro.2016.08.004. Epub 2016 Aug 6.

3.

Analysis of Power Laws, Shape Collapses, and Neural Complexity: New Techniques and MATLAB Support via the NCC Toolbox.

Marshall N, Timme NM, Bennett N, Ripp M, Lautzenhiser E, Beggs JM.

Front Physiol. 2016 Jun 27;7:250. doi: 10.3389/fphys.2016.00250. eCollection 2016.

4.

High-Degree Neurons Feed Cortical Computations.

Timme NM, Ito S, Myroshnychenko M, Nigam S, Shimono M, Yeh FC, Hottowy P, Litke AM, Beggs JM.

PLoS Comput Biol. 2016 May 9;12(5):e1004858. doi: 10.1371/journal.pcbi.1004858. eCollection 2016 May.

5.

A novel cross-frequency coupling detection method using the generalized Morse wavelets.

Nakhnikian A, Ito S, Dwiel LL, Grasse LM, Rebec GV, Lauridsen LN, Beggs JM.

J Neurosci Methods. 2016 Aug 30;269:61-73. doi: 10.1016/j.jneumeth.2016.04.019. Epub 2016 Apr 26.

6.

Rich-Club Organization in Effective Connectivity among Cortical Neurons.

Nigam S, Shimono M, Ito S, Yeh FC, Timme N, Myroshnychenko M, Lapish CC, Tosi Z, Hottowy P, Smith WC, Masmanidis SC, Litke AM, Sporns O, Beggs JM.

J Neurosci. 2016 Jan 20;36(3):670-84. doi: 10.1523/JNEUROSCI.2177-15.2016.

7.

Quasicritical brain dynamics on a nonequilibrium Widom line.

Williams-GarcĂ­a RV, Moore M, Beggs JM, Ortiz G.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Dec;90(6):062714. Epub 2014 Dec 23.

PMID:
25615136
8.

Multiplex networks of cortical and hippocampal neurons revealed at different timescales.

Timme N, Ito S, Myroshnychenko M, Yeh FC, Hiolski E, Hottowy P, Beggs JM.

PLoS One. 2014 Dec 23;9(12):e115764. doi: 10.1371/journal.pone.0115764. eCollection 2014.

9.

Functional Clusters, Hubs, and Communities in the Cortical Microconnectome.

Shimono M, Beggs JM.

Cereb Cortex. 2015 Oct;25(10):3743-57. doi: 10.1093/cercor/bhu252. Epub 2014 Oct 21.

10.

Large-scale, high-resolution multielectrode-array recording depicts functional network differences of cortical and hippocampal cultures.

Ito S, Yeh FC, Hiolski E, Rydygier P, Gunning DE, Hottowy P, Timme N, Litke AM, Beggs JM.

PLoS One. 2014 Aug 15;9(8):e105324. doi: 10.1371/journal.pone.0105324. eCollection 2014.

11.

Behavior modulates effective connectivity between cortex and striatum.

Nakhnikian A, Rebec GV, Grasse LM, Dwiel LL, Shimono M, Beggs JM.

PLoS One. 2014 Mar 11;9(3):e89443. doi: 10.1371/journal.pone.0089443. eCollection 2014.

12.

Synergy, redundancy, and multivariate information measures: an experimentalist's perspective.

Timme N, Alford W, Flecker B, Beggs JM.

J Comput Neurosci. 2014 Apr;36(2):119-40. doi: 10.1007/s10827-013-0458-4. Epub 2013 Jul 3. Review.

PMID:
23820856
13.

Dense arrays of micro-needles for recording and electrical stimulation of neural activity in acute brain slices.

Gunning DE, Beggs JM, Dabrowski W, Hottowy P, Kenney CJ, Sher A, Litke AM, Mathieson K.

J Neural Eng. 2013 Feb;10(1):016007. doi: 10.1088/1741-2560/10/1/016007. Epub 2012 Dec 12.

PMID:
23234809
14.

Universal critical dynamics in high resolution neuronal avalanche data.

Friedman N, Ito S, Brinkman BA, Shimono M, DeVille RE, Dahmen KA, Beggs JM, Butler TC.

Phys Rev Lett. 2012 May 18;108(20):208102. Epub 2012 May 16.

PMID:
23003192
15.

Being critical of criticality in the brain.

Beggs JM, Timme N.

Front Physiol. 2012 Jun 7;3:163. doi: 10.3389/fphys.2012.00163. eCollection 2012.

16.

Extending transfer entropy improves identification of effective connectivity in a spiking cortical network model.

Ito S, Hansen ME, Heiland R, Lumsdaine A, Litke AM, Beggs JM.

PLoS One. 2011;6(11):e27431. doi: 10.1371/journal.pone.0027431. Epub 2011 Nov 15.

17.

Partial information decomposition as a spatiotemporal filter.

Flecker B, Alford W, Beggs JM, Williams PL, Beer RD.

Chaos. 2011 Sep;21(3):037104. doi: 10.1063/1.3638449.

PMID:
21974667
18.

Charitable giving expenditures and the faith factor.

Showers VE, Showers LS, Beggs JM, Cox JE Jr.

Am J Econ Sociol. 2011;70(1):152-86.

PMID:
21322897
19.

Aberrant neuronal avalanches in cortical tissue removed from juvenile epilepsy patients.

Hobbs JP, Smith JL, Beggs JM.

J Clin Neurophysiol. 2010 Dec;27(6):380-6. doi: 10.1097/WNP.0b013e3181fdf8d3.

PMID:
21076327
20.

A few strong connections: optimizing information retention in neuronal avalanches.

Chen W, Hobbs JP, Tang A, Beggs JM.

BMC Neurosci. 2010 Jan 6;11:3. doi: 10.1186/1471-2202-11-3.

21.

An open hypothesis: is epilepsy learned, and can it be unlearned?

Hsu D, Chen W, Hsu M, Beggs JM.

Epilepsy Behav. 2008 Oct;13(3):511-22. doi: 10.1016/j.yebeh.2008.05.007. Epub 2008 Jun 24. Review.

22.

A maximum entropy model applied to spatial and temporal correlations from cortical networks in vitro.

Tang A, Jackson D, Hobbs J, Chen W, Smith JL, Patel H, Prieto A, Petrusca D, Grivich MI, Sher A, Hottowy P, Dabrowski W, Litke AM, Beggs JM.

J Neurosci. 2008 Jan 9;28(2):505-18. doi: 10.1523/JNEUROSCI.3359-07.2008.

23.

Simple spontaneously active Hebbian learning model: homeostasis of activity and connectivity, and consequences for learning and epileptogenesis.

Hsu D, Tang A, Hsu M, Beggs JM.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Oct;76(4 Pt 1):041909. Epub 2007 Oct 11.

PMID:
17995028
24.

The criticality hypothesis: how local cortical networks might optimize information processing.

Beggs JM.

Philos Trans A Math Phys Eng Sci. 2008 Feb 13;366(1864):329-43. Review.

25.

Critical branching captures activity in living neural networks and maximizes the number of metastable States.

Haldeman C, Beggs JM.

Phys Rev Lett. 2005 Feb 11;94(5):058101. Epub 2005 Feb 7.

PMID:
15783702
27.

Neuronal avalanches in neocortical circuits.

Beggs JM, Plenz D.

J Neurosci. 2003 Dec 3;23(35):11167-77.

28.

A statistical theory of long-term potentiation and depression.

Beggs JM.

Neural Comput. 2001 Jan;13(1):87-111.

PMID:
11177429
29.
30.

Prolonged synaptic integration in perirhinal cortical neurons.

Beggs JM, Moyer JR Jr, McGann JP, Brown TH.

J Neurophysiol. 2000 Jun;83(6):3294-8.

31.

A new class of DNA glycosylase/apurinic/apyrimidinic lyases that act on specific adenines in single-stranded DNA.

Nicolas E, Beggs JM, Haltiwanger BM, Taraschi TF.

J Biol Chem. 1998 Jul 3;273(27):17216-20.

32.

Direct evidence for the deoxyribonuclease activity of the plant ribosome inactivating protein gelonin.

Nicolas E, Beggs JM, Haltiwanger BM, Taraschi TF.

FEBS Lett. 1997 Apr 7;406(1-2):162-4.

33.

Electrophysiology and morphology of neurons in rat perirhinal cortex.

Beggs JM, Kairiss EW.

Brain Res. 1994 Nov 28;665(1):18-32.

PMID:
7882014

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