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Items: 1 to 50 of 73

1.

mRNAs biotinylated within the 5' cap and protected against decapping: new tools to capture RNA-protein complexes.

Bednarek S, Madan V, Sikorski PJ, Bartenschlager R, Kowalska J, Jemielity J.

Philos Trans R Soc Lond B Biol Sci. 2018 Nov 5;373(1762). pii: 20180167. doi: 10.1098/rstb.2018.0167.

PMID:
30397103
2.

Inroads into Internalization: Five Years of Endocytic Exploration.

Reynolds GD, Wang C, Pan J, Bednarek SY.

Plant Physiol. 2018 Jan;176(1):208-218. doi: 10.1104/pp.17.01117. Epub 2017 Oct 26. Review. No abstract available.

3.

SCD1 and SCD2 Form a Complex That Functions with the Exocyst and RabE1 in Exocytosis and Cytokinesis.

Mayers JR, Hu T, Wang C, Cárdenas JJ, Tan Y, Pan J, Bednarek SY.

Plant Cell. 2017 Oct;29(10):2610-2625. doi: 10.1105/tpc.17.00409. Epub 2017 Sep 29.

4.

Analysis of mononucleotides by tandem mass spectrometry: investigation of fragmentation pathways for phosphate- and ribose-modified nucleotide analogues.

Strzelecka D, Chmielinski S, Bednarek S, Jemielity J, Kowalska J.

Sci Rep. 2017 Aug 21;7(1):8931. doi: 10.1038/s41598-017-09416-6.

5.

Arabidopsis SH3P2 is an ubiquitin-binding protein that functions together with ESCRT-I and the deubiquitylating enzyme AMSH3.

Nagel MK, Kalinowska K, Vogel K, Reynolds GD, Wu Z, Anzenberger F, Ichikawa M, Tsutsumi C, Sato MH, Kuster B, Bednarek SY, Isono E.

Proc Natl Acad Sci U S A. 2017 Aug 22;114(34):E7197-E7204. doi: 10.1073/pnas.1710866114. Epub 2017 Aug 7.

6.

Analysis of the origin of birth defects in pregnant women from the Kujawy-Pomerania Region.

Lauda-Świeciak A, Bednarek S, Skórczewski J, Borowski D, Dubiel M.

Ginekol Pol. 2016;87(10):711-716. doi: 10.5603/GP.2016.0073.

7.

Clathrin regulates blue light-triggered lateral auxin distribution and hypocotyl phototropism in Arabidopsis.

Zhang Y, Yu Q, Jiang N, Yan X, Wang C, Wang Q, Liu J, Zhu M, Bednarek SY, Xu J, Pan J.

Plant Cell Environ. 2017 Jan;40(1):165-176. doi: 10.1111/pce.12854. Epub 2016 Nov 28.

PMID:
27770560
8.

TrackMate: An open and extensible platform for single-particle tracking.

Tinevez JY, Perry N, Schindelin J, Hoopes GM, Reynolds GD, Laplantine E, Bednarek SY, Shorte SL, Eliceiri KW.

Methods. 2017 Feb 15;115:80-90. doi: 10.1016/j.ymeth.2016.09.016. Epub 2016 Oct 3.

9.

Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification.

Dejonghe W, Kuenen S, Mylle E, Vasileva M, Keech O, Viotti C, Swerts J, Fendrych M, Ortiz-Morea FA, Mishev K, Delang S, Scholl S, Zarza X, Heilmann M, Kourelis J, Kasprowicz J, Nguyen le SL, Drozdzecki A, Van Houtte I, Szatmári AM, Majda M, Baisa G, Bednarek SY, Robert S, Audenaert D, Testerink C, Munnik T, Van Damme D, Heilmann I, Schumacher K, Winne J, Friml J, Verstreken P, Russinova E.

Nat Commun. 2016 Jun 8;7:11710. doi: 10.1038/ncomms11710.

10.

Differential Regulation of Clathrin and Its Adaptor Proteins during Membrane Recruitment for Endocytosis.

Wang C, Hu T, Yan X, Meng T, Wang Y, Wang Q, Zhang X, Gu Y, Sánchez-Rodríguez C, Gadeyne A, Lin J, Persson S, Van Damme D, Li C, Bednarek SY, Pan J.

Plant Physiol. 2016 May;171(1):215-29. doi: 10.1104/pp.15.01716. Epub 2016 Mar 4.

11.

Loss of Arabidopsis thaliana Dynamin-Related Protein 2B reveals separation of innate immune signaling pathways.

Smith JM, Leslie ME, Robinson SJ, Korasick DA, Zhang T, Backues SK, Cornish PV, Koo AJ, Bednarek SY, Heese A.

PLoS Pathog. 2014 Dec 18;10(12):e1004578. doi: 10.1371/journal.ppat.1004578. eCollection 2014 Dec.

12.

The microtubule plus-end tracking proteins SPR1 and EB1b interact to maintain polar cell elongation and directional organ growth in Arabidopsis.

Galva C, Kirik V, Lindeboom JJ, Kaloriti D, Rancour DM, Hussey PJ, Bednarek SY, Ehrhardt DW, Sedbrook JC.

Plant Cell. 2014 Nov;26(11):4409-25. doi: 10.1105/tpc.114.131482. Epub 2014 Nov 18.

13.

High lipid order of Arabidopsis cell-plate membranes mediated by sterol and DYNAMIN-RELATED PROTEIN1A function.

Frescatada-Rosa M, Stanislas T, Backues SK, Reichardt I, Men S, Boutté Y, Jürgens G, Moritz T, Bednarek SY, Grebe M.

Plant J. 2014 Dec;80(5):745-57. doi: 10.1111/tpj.12674. Epub 2014 Oct 25.

14.

The VASCULATURE COMPLEXITY AND CONNECTIVITY gene encodes a plant-specific protein required for embryo provasculature development.

Roschzttardtz H, Paez-Valencia J, Dittakavi T, Jali S, Reyes FC, Baisa G, Anne P, Gissot L, Palauqui JC, Masson PH, Bednarek SY, Otegui MS.

Plant Physiol. 2014 Oct;166(2):889-902. doi: 10.1104/pp.114.246314. Epub 2014 Aug 22.

15.

Preparation of enriched plant clathrin-coated vesicles by differential and density gradient centrifugation.

Reynolds GD, August B, Bednarek SY.

Methods Mol Biol. 2014;1209:163-77. doi: 10.1007/978-1-4939-1420-3_13.

PMID:
25117283
16.

Electron spin separation without magnetic field.

Pawłowski J, Szumniak P, Skubis A, Bednarek S.

J Phys Condens Matter. 2014 Aug 27;26(34):345302. doi: 10.1088/0953-8984/26/34/345302. Epub 2014 Aug 8.

PMID:
25106038
17.

The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants.

Gadeyne A, Sánchez-Rodríguez C, Vanneste S, Di Rubbo S, Zauber H, Vanneste K, Van Leene J, De Winne N, Eeckhout D, Persiau G, Van De Slijke E, Cannoot B, Vercruysse L, Mayers JR, Adamowski M, Kania U, Ehrlich M, Schweighofer A, Ketelaar T, Maere S, Bednarek SY, Friml J, Gevaert K, Witters E, Russinova E, Persson S, De Jaeger G, Van Damme D.

Cell. 2014 Feb 13;156(4):691-704. doi: 10.1016/j.cell.2014.01.039.

18.

Mediation of clathrin-dependent trafficking during cytokinesis and cell expansion by Arabidopsis stomatal cytokinesis defective proteins.

McMichael CM, Reynolds GD, Koch LM, Wang C, Jiang N, Nadeau J, Sack FD, Gelderman MB, Pan J, Bednarek SY.

Plant Cell. 2013 Oct;25(10):3910-25. doi: 10.1105/tpc.113.115162. Epub 2013 Oct 31.

19.

Budding and braking news about clathrin-mediated endocytosis.

Baisa GA, Mayers JR, Bednarek SY.

Curr Opin Plant Biol. 2013 Dec;16(6):718-25. doi: 10.1016/j.pbi.2013.09.005. Epub 2013 Oct 15. Review.

PMID:
24139529
20.

MTV1 and MTV4 encode plant-specific ENTH and ARF GAP proteins that mediate clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network.

Sauer M, Delgadillo MO, Zouhar J, Reynolds GD, Pennington JG, Jiang L, Liljegren SJ, Stierhof YD, De Jaeger G, Otegui MS, Bednarek SY, Rojo E.

Plant Cell. 2013 Jun;25(6):2217-35. doi: 10.1105/tpc.113.111724. Epub 2013 Jun 14.

21.

Clathrin light chains regulate clathrin-mediated trafficking, auxin signaling, and development in Arabidopsis.

Wang C, Yan X, Chen Q, Jiang N, Fu W, Ma B, Liu J, Li C, Bednarek SY, Pan J.

Plant Cell. 2013 Feb;25(2):499-516. doi: 10.1105/tpc.112.108373. Epub 2013 Feb 19.

22.

Cis-Golgi cisternal assembly and biosynthetic activation occur sequentially in plants and algae.

Donohoe BS, Kang BH, Gerl MJ, Gergely ZR, McMichael CM, Bednarek SY, Staehelin LA.

Traffic. 2013 May;14(5):551-67. doi: 10.1111/tra.12052. Epub 2013 Feb 25.

23.

Cytoskeletal and membrane dynamics during higher plant cytokinesis.

McMichael CM, Bednarek SY.

New Phytol. 2013 Mar;197(4):1039-57. doi: 10.1111/nph.12122. Epub 2013 Jan 24. Review.

24.

Spin-orbit-mediated manipulation of heavy-hole spin qubits in gated semiconductor nanodevices.

Szumniak P, Bednarek S, Partoens B, Peeters FM.

Phys Rev Lett. 2012 Sep 7;109(10):107201. Epub 2012 Sep 4.

PMID:
23005320
25.

Cell plate restricted association of DRP1A and PIN proteins is required for cell polarity establishment in Arabidopsis.

Mravec J, Petrášek J, Li N, Boeren S, Karlova R, Kitakura S, Pařezová M, Naramoto S, Nodzyński T, Dhonukshe P, Bednarek SY, Zažímalová E, de Vries S, Friml J.

Curr Biol. 2011 Jun 21;21(12):1055-60. doi: 10.1016/j.cub.2011.05.018. Epub 2011 Jun 9.

26.

The Arabidopsis dynamin-related protein2 family is essential for gametophyte development.

Backues SK, Korasick DA, Heese A, Bednarek SY.

Plant Cell. 2010 Oct;22(10):3218-31. doi: 10.1105/tpc.110.077727. Epub 2010 Oct 19.

27.

ABP1 mediates auxin inhibition of clathrin-dependent endocytosis in Arabidopsis.

Robert S, Kleine-Vehn J, Barbez E, Sauer M, Paciorek T, Baster P, Vanneste S, Zhang J, Simon S, Čovanová M, Hayashi K, Dhonukshe P, Yang Z, Bednarek SY, Jones AM, Luschnig C, Aniento F, Zažímalová E, Friml J.

Cell. 2010 Oct 1;143(1):111-21. doi: 10.1016/j.cell.2010.09.027.

28.

Protein antigen expression in Escherichia coli for antibody production.

Rancour DM, Backues SK, Bednarek SY.

Methods Mol Biol. 2010;657:3-20. doi: 10.1007/978-1-60761-783-9_1.

PMID:
20602203
29.

Plant dynamin-related protein families DRP1 and DRP2 in plant development.

Bednarek SY, Backues SK.

Biochem Soc Trans. 2010 Jun;38(3):797-806. doi: 10.1042/BST0380797. Review.

PMID:
20491667
30.

Novel functions of Stomatal Cytokinesis-Defective 1 (SCD1) in innate immune responses against bacteria.

Korasick DA, McMichael C, Walker KA, Anderson JC, Bednarek SY, Heese A.

J Biol Chem. 2010 Jul 23;285(30):23342-50. doi: 10.1074/jbc.M109.090787. Epub 2010 May 14.

31.

Arabidopsis dynamin-related protein 1A polymers bind, but do not tubulate, liposomes.

Backues SK, Bednarek SY.

Biochem Biophys Res Commun. 2010 Mar 19;393(4):734-9. doi: 10.1016/j.bbrc.2010.02.070. Epub 2010 Feb 18.

32.

Gated combo nanodevice for sequential operations on single electron spin.

Bednarek S, Szafran B.

Nanotechnology. 2009 Feb 11;20(6):065402. doi: 10.1088/0957-4484/20/6/065402. Epub 2009 Jan 15.

PMID:
19417385
33.

Magnetic-field asymmetry of electron wave packet transmission in bent channels capacitively coupled to a metal gate.

Kalina R, Szafran B, Bednarek S, Peeters FM.

Phys Rev Lett. 2009 Feb 13;102(6):066807. Epub 2009 Feb 12.

PMID:
19257623
34.

[Neglected children: birth, life and survival].

Bednarek S, Absil G, Vandoorne C, Lachaussée S, Vanmeerbeek M.

Presse Med. 2009 Mar;38(3):377-83. doi: 10.1016/j.lpm.2009.01.001. Epub 2009 Jan 24. French.

35.

Spin rotations induced by an electron running in closed trajectories in gated semiconductor nanodevices.

Bednarek S, Szafran B.

Phys Rev Lett. 2008 Nov 21;101(21):216805. Epub 2008 Nov 21.

PMID:
19113439
36.

In planta analysis of the cell cycle-dependent localization of AtCDC48A and its critical roles in cell division, expansion, and differentiation.

Park S, Rancour DM, Bednarek SY.

Plant Physiol. 2008 Sep;148(1):246-58. doi: 10.1104/pp.108.121897. Epub 2008 Jul 25.

37.

Induced quantum dots and wires: electron storage and delivery.

Bednarek S, Szafran B, Dudek RJ, Lis K.

Phys Rev Lett. 2008 Mar 28;100(12):126805. Epub 2008 Mar 28.

PMID:
18517899
38.

Dynamics of Arabidopsis dynamin-related protein 1C and a clathrin light chain at the plasma membrane.

Konopka CA, Backues SK, Bednarek SY.

Plant Cell. 2008 May;20(5):1363-80. doi: 10.1105/tpc.108.059428. Epub 2008 May 23.

39.

Comparison of the dynamics and functional redundancy of the Arabidopsis dynamin-related isoforms DRP1A and DRP1C during plant development.

Konopka CA, Bednarek SY.

Plant Physiol. 2008 Aug;147(4):1590-602. doi: 10.1104/pp.108.116863. Epub 2008 Mar 14.

40.

Bridging the divide between cytokinesis and cell expansion.

Backues SK, Konopka CA, McMichael CM, Bednarek SY.

Curr Opin Plant Biol. 2007 Dec;10(6):607-15. Epub 2007 Oct 23. Review.

PMID:
17936678
41.
43.

Membrane association, mechanism of action, and structure of Arabidopsis embryonic factor 1 (FAC1).

Han BW, Bingman CA, Mahnke DK, Bannen RM, Bednarek SY, Sabina RL, Phillips GN Jr.

J Biol Chem. 2006 May 26;281(21):14939-47. Epub 2006 Mar 16.

44.

Dynamin and cytokinesis.

Konopka CA, Schleede JB, Skop AR, Bednarek SY.

Traffic. 2006 Mar;7(3):239-47. Review.

45.

Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays.

Stolc V, Samanta MP, Tongprasit W, Sethi H, Liang S, Nelson DC, Hegeman A, Nelson C, Rancour D, Bednarek S, Ulrich EL, Zhao Q, Wrobel RL, Newman CS, Fox BG, Phillips GN Jr, Markley JL, Sussman MR.

Proc Natl Acad Sci U S A. 2005 Mar 22;102(12):4453-8. Epub 2005 Mar 8.

46.

Plant UBX domain-containing protein 1, PUX1, regulates the oligomeric structure and activity of arabidopsis CDC48.

Rancour DM, Park S, Knight SD, Bednarek SY.

J Biol Chem. 2004 Dec 24;279(52):54264-74. Epub 2004 Oct 21.

47.

Membrane trafficking in plants: new discoveries and approaches.

Carter CJ, Bednarek SY, Raikhel NV.

Curr Opin Plant Biol. 2004 Dec;7(6):701-7. Review.

PMID:
15491919
48.

The Arabidopsis Rab GTPase RabA4b localizes to the tips of growing root hair cells.

Preuss ML, Serna J, Falbel TG, Bednarek SY, Nielsen E.

Plant Cell. 2004 Jun;16(6):1589-603. Epub 2004 May 21.

49.

A unified nomenclature for Arabidopsis dynamin-related large GTPases based on homology and possible functions.

Hong Z, Bednarek SY, Blumwald E, Hwang I, Jurgens G, Menzel D, Osteryoung KW, Raikhel NV, Shinozaki K, Tsutsumi N, Verma DP.

Plant Mol Biol. 2003 Oct;53(3):261-5. No abstract available.

PMID:
14750516
50.

Cytokinesis: GAGs form the walls that separate our parts.

White J, Bednarek S.

Curr Biol. 2003 Sep 16;13(18):R717-8.

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