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Items: 34

1.

Contribution of RNA Degradation to Intrinsic and Extrinsic Noise in Gene Expression.

Baudrimont A, Jaquet V, Wallerich S, Voegeli S, Becskei A.

Cell Rep. 2019 Mar 26;26(13):3752-3761.e5. doi: 10.1016/j.celrep.2019.03.001.

2.

Synthetic Transcription Factors Switch from Local to Long-Range Control during Cell Differentiation.

Wada T, Wallerich S, Becskei A.

ACS Synth Biol. 2019 Feb 15;8(2):223-231. doi: 10.1021/acssynbio.8b00369. Epub 2019 Jan 17.

PMID:
30624895
3.

Stochastic Gene Choice during Cellular Differentiation.

Wada T, Wallerich S, Becskei A.

Cell Rep. 2018 Sep 25;24(13):3503-3512. doi: 10.1016/j.celrep.2018.08.074.

4.

Impact of Methods on the Measurement of mRNA Turnover.

Wada T, Becskei A.

Int J Mol Sci. 2017 Dec 15;18(12). pii: E2723. doi: 10.3390/ijms18122723. Review.

5.

Multiplexed gene control reveals rapid mRNA turnover.

Baudrimont A, Voegeli S, Viloria EC, Stritt F, Lenon M, Wada T, Jaquet V, Becskei A.

Sci Adv. 2017 Jul 12;3(7):e1700006. doi: 10.1126/sciadv.1700006. eCollection 2017 Jul.

6.

Measurement of In Vivo Protein Binding Affinities in a Signaling Network with Mass Spectrometry.

Gencoglu M, Schmidt A, Becskei A.

ACS Synth Biol. 2017 Jul 21;6(7):1305-1314. doi: 10.1021/acssynbio.6b00282. Epub 2017 Apr 5.

PMID:
28333434
7.

Measurement of bistability in a multidimensional parameter space.

Jaquet V, Hsu C, Becskei A.

Integr Biol (Camb). 2017 Feb 20;9(2):167-177. doi: 10.1039/c6ib00242k.

PMID:
28134382
8.

An open-loop approach to calculate noise-induced transitions.

Maleki F, Becskei A.

J Theor Biol. 2017 Feb 21;415:145-157. doi: 10.1016/j.jtbi.2016.12.012. Epub 2016 Dec 18.

PMID:
27993627
9.

Contribution of Bistability and Noise to Cell Fate Transitions Determined by Feedback Opening.

Hsu C, Jaquet V, Maleki F, Becskei A.

J Mol Biol. 2016 Oct 9;428(20):4115-4128. doi: 10.1016/j.jmb.2016.07.024. Epub 2016 Aug 4.

10.

Protein Dimerization Generates Bistability in Positive Feedback Loops.

Hsu C, Jaquet V, Gencoglu M, Becskei A.

Cell Rep. 2016 Aug 2;16(5):1204-1210. doi: 10.1016/j.celrep.2016.06.072. Epub 2016 Jul 14.

11.

Identification of optimal parameter combinations for the emergence of bistability.

Májer I, Hajihosseini A, Becskei A.

Phys Biol. 2015 Nov 24;12(6):066011. doi: 10.1088/1478-3975/12/6/066011.

PMID:
26599573
12.

Gene regulation: Expression feels two pulses.

Baudrimont A, Becskei A.

Nature. 2015 Nov 5;527(7576):46-7. doi: 10.1038/nature15634. Epub 2015 Oct 14. No abstract available.

PMID:
26466565
13.

Quantification of pre-mRNA escape rate and synergy in splicing.

Bonde MM, Voegeli S, Baudrimont A, Séraphin B, Becskei A.

Nucleic Acids Res. 2014 Nov 10;42(20):12847-60. doi: 10.1093/nar/gku1014. Epub 2014 Oct 28.

14.

Myoblasts inhibit prostate cancer growth by paracrine secretion of tumor necrosis factor-α.

Stölting MN, Ferrari S, Handschin C, Becskei A, Provenzano M, Sulser T, Eberli D.

J Urol. 2013 May;189(5):1952-9. doi: 10.1016/j.juro.2012.10.071. Epub 2012 Oct 30.

15.

Stochastic signalling rewires the interaction map of a multiple feedback network during yeast evolution.

Hsu C, Scherrer S, Buetti-Dinh A, Ratna P, Pizzolato J, Jaquet V, Becskei A.

Nat Commun. 2012 Feb 21;3:682. doi: 10.1038/ncomms1687.

16.

Modeling of chromosomal epigenetic silencing processes.

Becskei A, Scherrer S, Kelemen JZ, Murray AE.

Transcription. 2011 Jul;2(4):173-178.

17.

Construction of cis-regulatory input functions of yeast promoters.

Ratna P, Becskei A.

Methods Mol Biol. 2011;734:45-61. doi: 10.1007/978-1-61779-086-7_3.

PMID:
21468984
18.

Systems biology: The cost of feedback control.

Sun L, Becskei A.

Nature. 2010 Sep 9;467(7312):163-4. doi: 10.1038/467163a. No abstract available.

PMID:
20829785
19.

Spatial epigenetic control of mono- and bistable gene expression.

Kelemen JZ, Ratna P, Scherrer S, Becskei A.

PLoS Biol. 2010 Mar 16;8(3):e1000332. doi: 10.1371/journal.pbio.1000332.

20.

Biology inspires engineering.

Byun R, Becskei A.

Genome Biol. 2009;10(11):317. doi: 10.1186/gb-2009-10-11-317. Epub 2009 Nov 19.

21.

Control and signal processing by transcriptional interference.

Buetti-Dinh A, Ungricht R, Kelemen JZ, Shetty C, Ratna P, Becskei A.

Mol Syst Biol. 2009;5:300. doi: 10.1038/msb.2009.61. Epub 2009 Aug 18.

22.

Linearization through distortion: a new facet of negative feedback in signalling.

Becskei A.

Mol Syst Biol. 2009;5:255. doi: 10.1038/msb.2009.14. Epub 2009 Mar 17. No abstract available.

23.

Synergy of repression and silencing gradients along the chromosome.

Ratna P, Scherrer S, Fleischli C, Becskei A.

J Mol Biol. 2009 Apr 10;387(4):826-39. doi: 10.1016/j.jmb.2009.02.025. Epub 2009 Feb 20.

PMID:
19233208
24.

Contribution of IL-12R mediated feedback loop to Th1 cell differentiation.

Becskei A, Grusby MJ.

FEBS Lett. 2007 Nov 13;581(27):5199-206. Epub 2007 Oct 12.

25.

A system of counteracting feedback loops regulates Cdc42p activity during spontaneous cell polarization.

Ozbudak EM, Becskei A, van Oudenaarden A.

Dev Cell. 2005 Oct;9(4):565-71.

26.

Contributions of low molecule number and chromosomal positioning to stochastic gene expression.

Becskei A, Kaufmann BB, van Oudenaarden A.

Nat Genet. 2005 Sep;37(9):937-44. Epub 2005 Aug 7.

PMID:
16086016
27.

Enhancement of cellular memory by reducing stochastic transitions.

Acar M, Becskei A, van Oudenaarden A.

Nature. 2005 May 12;435(7039):228-32.

PMID:
15889097
28.

Quantitative models of nuclear transport.

Becskei A, Mattaj IW.

Curr Opin Cell Biol. 2005 Feb;17(1):27-34. Review.

PMID:
15661516
29.

Amplitude control of cell-cycle waves by nuclear import.

Becskei A, Boselli MG, van Oudenaarden A.

Nat Cell Biol. 2004 May;6(5):451-7. Epub 2004 Apr 25.

PMID:
15107861
30.

The strategy for coupling the RanGTP gradient to nuclear protein export.

Becskei A, Mattaj IW.

Proc Natl Acad Sci U S A. 2003 Feb 18;100(4):1717-22. Epub 2003 Jan 31.

31.

Binary and graded responses in gene networks.

Louis M, Becskei A.

Sci STKE. 2002 Jul 30;2002(143):pe33. Review.

PMID:
12149512
32.
33.

Engineering stability in gene networks by autoregulation.

Becskei A, Serrano L.

Nature. 2000 Jun 1;405(6786):590-3.

PMID:
10850721
34.

Beta-amyloid (1-42) peptide impairs blood-brain barrier function after intracarotid infusion in rats.

Jancsó G, Domoki F, Sántha P, Varga J, Fischer J, Orosz K, Penke B, Becskei A, Dux M, Tóth L.

Neurosci Lett. 1998 Sep 4;253(2):139-41.

PMID:
9774169

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