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Items: 1 to 50 of 215

1.

Alpha- and beta-mannan utilization by marine Bacteroidetes.

Chen J, Robb CS, Unfried F, Kappelmann L, Markert S, Song T, Harder J, Avcı B, Becher D, Xie P, Amann RI, Hehemann JH, Schweder T, Teeling H.

Environ Microbiol. 2018 Sep 24. doi: 10.1111/1462-2920.14414. [Epub ahead of print]

PMID:
30246424
2.

Metabolic Reprogramming of Clostridioides difficile During the Stationary Phase With the Induction of Toxin Production.

Hofmann JD, Otto A, Berges M, Biedendieck R, Michel AM, Becher D, Jahn D, Neumann-Schaal M.

Front Microbiol. 2018 Aug 21;9:1970. doi: 10.3389/fmicb.2018.01970. eCollection 2018.

3.

Biphasic cellular adaptations and ecological implications of Alteromonas macleodii degrading a mixture of algal polysaccharides.

Koch H, Dürwald A, Schweder T, Noriega-Ortega B, Vidal-Melgosa S, Hehemann JH, Dittmar T, Freese HM, Becher D, Simon M, Wietz M.

ISME J. 2018 Aug 16. doi: 10.1038/s41396-018-0252-4. [Epub ahead of print]

PMID:
30116038
4.

Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans.

Kappelmann L, Krüger K, Hehemann JH, Harder J, Markert S, Unfried F, Becher D, Shapiro N, Schweder T, Amann RI, Teeling H.

ISME J. 2018 Aug 15. doi: 10.1038/s41396-018-0242-6. [Epub ahead of print]

PMID:
30111868
5.

An ancient family of mobile genomic islands introducing cephalosporinase and carbapenemase genes in Enterobacteriaceae.

Nepal S, Bonn F, Grasso S, Stobernack T, de Jong A, Zhou K, Wedema R, Rosema S, Becher D, Otto A, Rossen JW, van Dijl JM, Bathoorn E.

Virulence. 2018;9(1):1377-1389. doi: 10.1080/21505594.2018.1509666.

6.

Proteomic analysis of bacterial (outer) membrane vesicles: progress and clinical potential.

Kroniger T, Otto A, Becher D.

Expert Rev Proteomics. 2018 Aug;15(8):623-626. doi: 10.1080/14789450.2018.1505509. Epub 2018 Aug 2. No abstract available.

PMID:
30068219
7.

Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms.

Unfried F, Becker S, Robb CS, Hehemann JH, Markert S, Heiden SE, Hinzke T, Becher D, Reintjes G, Krüger K, Avcı B, Kappelmann L, Hahnke RL, Fischer T, Harder J, Teeling H, Fuchs B, Barbeyron T, Amann RI, Schweder T.

ISME J. 2018 Jul 30. doi: 10.1038/s41396-018-0243-5. [Epub ahead of print]

PMID:
30061707
8.

The Escherichia coli Type III Secretion System 2 Has a Global Effect on Cell Surface.

Shulman A, Yair Y, Biran D, Sura T, Otto A, Gophna U, Becher D, Hecker M, Ron EZ.

MBio. 2018 Jul 3;9(4). pii: e01070-18. doi: 10.1128/mBio.01070-18.

9.

Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys.

Pjevac P, Meier DV, Markert S, Hentschker C, Schweder T, Becher D, Gruber-Vodicka HR, Richter M, Bach W, Amann R, Meyerdierks A.

Front Microbiol. 2018 Apr 6;9:680. doi: 10.3389/fmicb.2018.00680. eCollection 2018.

10.

Proteomic response of Streptococcus pneumoniae to iron limitation.

Hoyer J, Bartel J, Gómez-Mejia A, Rohde M, Hirschfeld C, Heß N, Sura T, Maaß S, Hammerschmidt S, Becher D.

Int J Med Microbiol. 2018 Aug;308(6):713-721. doi: 10.1016/j.ijmm.2018.02.001. Epub 2018 Feb 13.

PMID:
29496408
11.

Differential daptomycin resistance development in Staphylococcus aureus strains with active and mutated gra regulatory systems.

Müller A, Grein F, Otto A, Gries K, Orlov D, Zarubaev V, Girard M, Sher X, Shamova O, Roemer T, François P, Becher D, Schneider T, Sahl HG.

Int J Med Microbiol. 2018 Apr;308(3):335-348. doi: 10.1016/j.ijmm.2017.12.002. Epub 2017 Dec 21.

PMID:
29429584
12.

Adaptation of Staphylococcus aureus to Airway Environments in Patients With Cystic Fibrosis by Upregulation of Superoxide Dismutase M and Iron-Scavenging Proteins.

Treffon J, Block D, Moche M, Reiss S, Fuchs S, Engelmann S, Becher D, Langhanki L, Mellmann A, Peters G, Kahl BC.

J Infect Dis. 2018 Apr 11;217(9):1453-1461. doi: 10.1093/infdis/jiy012.

PMID:
29325044
13.

A therapeutic Porphyromonas gingivalis gingipain vaccine induces neutralising IgG1 antibodies that protect against experimental periodontitis.

O'Brien-Simpson NM, Holden JA, Lenzo JC, Tan Y, Brammar GC, Walsh KA, Singleton W, Orth RKH, Slakeski N, Cross KJ, Darby IB, Becher D, Rowe T, Morelli AB, Hammet A, Nash A, Brown A, Ma B, Vingadassalom D, McCluskey J, Kleanthous H, Reynolds EC.

NPJ Vaccines. 2016 Dec 1;1:16022. doi: 10.1038/npjvaccines.2016.22. eCollection 2016.

14.

From the wound to the bench: exoproteome interplay between wound-colonizing Staphylococcus aureus strains and co-existing bacteria.

García-Pérez AN, de Jong A, Junker S, Becher D, Chlebowicz MA, Duipmans JC, Jonkman MF, van Dijl JM.

Virulence. 2018 Jan 1;9(1):363-378. doi: 10.1080/21505594.2017.1395129.

15.

The Proteomic Response of Bacillus pumilus Cells to Glucose Starvation.

Handtke S, Albrecht D, Otto A, Becher D, Hecker M, Voigt B.

Proteomics. 2018 Jan;18(1). doi: 10.1002/pmic.201700109.

PMID:
29193752
16.

Spectral Library Based Analysis of Arginine Phosphorylations in Staphylococcus aureus.

Junker S, Maaβ S, Otto A, Michalik S, Morgenroth F, Gerth U, Hecker M, Becher D.

Mol Cell Proteomics. 2018 Feb;17(2):335-348. doi: 10.1074/mcp.RA117.000378. Epub 2017 Nov 28.

PMID:
29183913
17.

Proteome-wide alterations in an industrial clavulanic acid producing strain of Streptomyces clavuligerus.

Ünsaldı E, Kurt-Kızıldoğan A, Voigt B, Becher D, Özcengiz G.

Synth Syst Biotechnol. 2016 Nov 6;2(1):39-48. doi: 10.1016/j.synbio.2016.10.003. eCollection 2017 Mar.

18.

A quantitative assessment of the membrane-integral sub-proteome of a bacterial magnetic organelle.

Raschdorf O, Bonn F, Zeytuni N, Zarivach R, Becher D, Schüler D.

J Proteomics. 2018 Feb 10;172:89-99. doi: 10.1016/j.jprot.2017.10.007. Epub 2017 Oct 17.

PMID:
29054541
19.

Global quantification of phosphoproteins combining metabolic labeling and gel-based proteomics in B. pumilus.

Hentschker C, Dewald C, Otto A, Büttner K, Hecker M, Becher D.

Electrophoresis. 2018 Jan;39(2):334-343. doi: 10.1002/elps.201700220. Epub 2017 Oct 17.

PMID:
28944503
20.

A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions.

Michalik S, Depke M, Murr A, Gesell Salazar M, Kusebauch U, Sun Z, Meyer TC, Surmann K, Pförtner H, Hildebrandt P, Weiss S, Palma Medina LM, Gutjahr M, Hammer E, Becher D, Pribyl T, Hammerschmidt S, Deutsch EW, Bader SL, Hecker M, Moritz RL, Mäder U, Völker U, Schmidt F.

Sci Rep. 2017 Sep 8;7(1):9718. doi: 10.1038/s41598-017-10059-w.

21.

Identification of new protein-coding genes with a potential role in the virulence of the plant pathogen Xanthomonas euvesicatoria.

Abendroth U, Adlung N, Otto A, Grüneisen B, Becher D, Bonas U.

BMC Genomics. 2017 Aug 16;18(1):625. doi: 10.1186/s12864-017-4041-7.

22.

The glyceraldehyde-3-phosphate dehydrogenase GapDH of Corynebacterium diphtheriae is redox-controlled by protein S-mycothiolation under oxidative stress.

Hillion M, Imber M, Pedre B, Bernhardt J, Saleh M, Loi VV, Maaß S, Becher D, Astolfi Rosado L, Adrian L, Weise C, Hell R, Wirtz M, Messens J, Antelmann H.

Sci Rep. 2017 Jul 10;7(1):5020. doi: 10.1038/s41598-017-05206-2.

23.

Ser/Thr protein kinase PrkC-mediated regulation of GroEL is critical for biofilm formation in Bacillus anthracis.

Arora G, Sajid A, Virmani R, Singhal A, Kumar CMS, Dhasmana N, Khanna T, Maji A, Misra R, Molle V, Becher D, Gerth U, Mande SC, Singh Y.

NPJ Biofilms Microbiomes. 2017 Mar 7;3:7. doi: 10.1038/s41522-017-0015-4. eCollection 2017.

24.

Signatures of cytoplasmic proteins in the exoproteome distinguish community- and hospital-associated methicillin-resistant Staphylococcus aureus USA300 lineages.

Mekonnen SA, Palma Medina LM, Glasner C, Tsompanidou E, de Jong A, Grasso S, Schaffer M, Mäder U, Larsen AR, Gumpert H, Westh H, Völker U, Otto A, Becher D, van Dijl JM.

Virulence. 2017 Aug 18;8(6):891-907. doi: 10.1080/21505594.2017.1325064. Epub 2017 May 5.

25.

Monitoring global protein thiol-oxidation and protein S-mycothiolation in Mycobacterium smegmatis under hypochlorite stress.

Hillion M, Bernhardt J, Busche T, Rossius M, Maaß S, Becher D, Rawat M, Wirtz M, Hell R, Rückert C, Kalinowski J, Antelmann H.

Sci Rep. 2017 Apr 26;7(1):1195. doi: 10.1038/s41598-017-01179-4.

26.

Bacillus pumilus KatX2 confers enhanced hydrogen peroxide resistance to a Bacillus subtilis PkatA::katX2 mutant strain.

Handtke S, Albrecht D, Zühlke D, Otto A, Becher D, Schweder T, Riedel K, Hecker M, Voigt B.

Microb Cell Fact. 2017 Apr 26;16(1):72. doi: 10.1186/s12934-017-0684-y.

27.

Insight into the evolution of microbial metabolism from the deep-branching bacterium, Thermovibrio ammonificans.

Giovannelli D, Sievert SM, Hügler M, Markert S, Becher D, Schweder T, Vetriani C.

Elife. 2017 Apr 24;6. pii: e18990. doi: 10.7554/eLife.18990.

28.

Aquatic adaptation of a laterally acquired pectin degradation pathway in marine gammaproteobacteria.

Hehemann JH, Truong LV, Unfried F, Welsch N, Kabisch J, Heiden SE, Junker S, Becher D, Thürmer A, Daniel R, Amann R, Schweder T.

Environ Microbiol. 2017 Jun;19(6):2320-2333. doi: 10.1111/1462-2920.13726. Epub 2017 Apr 3.

PMID:
28276126
29.

Comparative Proteomics of Purified Pathogen Vacuoles Correlates Intracellular Replication of Legionella pneumophila with the Small GTPase Ras-related protein 1 (Rap1).

Schmölders J, Manske C, Otto A, Hoffmann C, Steiner B, Welin A, Becher D, Hilbi H.

Mol Cell Proteomics. 2017 Apr;16(4):622-641. doi: 10.1074/mcp.M116.063453. Epub 2017 Feb 9.

30.

An Easy and Fast Protocol for Affinity Bead-Based Protein Enrichment and Storage of Proteome Samples.

Otto A, Maaß S, Bonn F, Büttner K, Becher D.

Methods Enzymol. 2017;585:1-13. doi: 10.1016/bs.mie.2016.09.012. Epub 2017 Jan 9.

PMID:
28109424
31.

Sample Preparation for Mass-Spectrometry Based Absolute Protein Quantification in Antibiotic Stress Research.

Bonn F, Maass S, Becher D.

Methods Mol Biol. 2017;1520:281-289. doi: 10.1007/978-1-4939-6634-9_17.

PMID:
27873259
32.

Metabolic and physiological interdependencies in the Bathymodiolus azoricus symbiosis.

Ponnudurai R, Kleiner M, Sayavedra L, Petersen JM, Moche M, Otto A, Becher D, Takeuchi T, Satoh N, Dubilier N, Schweder T, Markert S.

ISME J. 2017 Feb;11(2):463-477. doi: 10.1038/ismej.2016.124. Epub 2016 Nov 1.

33.

Nitrogen fixation in a chemoautotrophic lucinid symbiosis.

König S, Gros O, Heiden SE, Hinzke T, Thürmer A, Poehlein A, Meyer S, Vatin M, Mbéguié-A-Mbéguié D, Tocny J, Ponnudurai R, Daniel R, Becher D, Schweder T, Markert S.

Nat Microbiol. 2016 Oct 24;2:16193. doi: 10.1038/nmicrobiol.2016.193.

PMID:
27775698
34.

Extracellular Proteome and Citrullinome of the Oral Pathogen Porphyromonas gingivalis.

Stobernack T, Glasner C, Junker S, Gabarrini G, de Smit M, de Jong A, Otto A, Becher D, van Winkelhoff AJ, van Dijl JM.

J Proteome Res. 2016 Dec 2;15(12):4532-4543. Epub 2016 Oct 19.

PMID:
27712078
35.

Impact of Moderate Temperature Changes on Neisseria meningitidis Adhesion Phenotypes and Proteome.

Lappann M, Otto A, Brauer M, Becher D, Vogel U, Johswich K.

Infect Immun. 2016 Nov 18;84(12):3484-3495. Print 2016 Dec.

36.

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein.

Smirnov A, Förstner KU, Holmqvist E, Otto A, Günster R, Becher D, Reinhardt R, Vogel J.

Proc Natl Acad Sci U S A. 2016 Oct 11;113(41):11591-11596. Epub 2016 Sep 26.

37.

Proteomics of septicemic Escherichia coli.

Otto A, Biran D, Sura T, Becher D, Ron EZ.

Proteomics Clin Appl. 2016 Oct;10(9-10):1020-1024. doi: 10.1002/prca.201600049. Review.

PMID:
27604157
38.

The protein inventory of Clostridium difficile grown in complex and minimal medium.

Otto A, Maaß S, Lassek C, Becher D, Hecker M, Riedel K, Sievers S.

Proteomics Clin Appl. 2016 Oct;10(9-10):1068-1072. doi: 10.1002/prca.201600069. Epub 2016 Sep 12.

PMID:
27511832
39.

Electronic physiologic and subjective data acquisition in home-dwelling heart failure patients: An assessment of patient use and perception of usability.

Gardner CL, Flanagan MC, Franklin C, John-Swayers C, Walsh-Pouch S, Bryant FJ, Romano CA, Gibbons S, De Jong M, Hoang A, Becher D, Burke HB.

Int J Med Inform. 2016 Sep;93:42-8. doi: 10.1016/j.ijmedinf.2016.06.001. Epub 2016 Jun 3.

PMID:
27435946
40.

The adoption of an electronic health record did not improve A1c values in Type 2 diabetes.

Burke HB, Becher DA, Hoang A, Gimbel RW.

J Innov Health Inform. 2016 Apr 15;23(1):144. doi: 10.14236/jhi.v23i1.144.

41.

Costs of life - Dynamics of the protein inventory of Staphylococcus aureus during anaerobiosis.

Zühlke D, Dörries K, Bernhardt J, Maaß S, Muntel J, Liebscher V, Pané-Farré J, Riedel K, Lalk M, Völker U, Engelmann S, Becher D, Fuchs S, Hecker M.

Sci Rep. 2016 Jun 27;6:28172. doi: 10.1038/srep28172.

42.

Investigation of plasmid-induced growth defect in Pseudomonas putida.

Mi J, Sydow A, Schempp F, Becher D, Schewe H, Schrader J, Buchhaupt M.

J Biotechnol. 2016 Aug 10;231:167-173. doi: 10.1016/j.jbiotec.2016.06.001. Epub 2016 Jun 7.

PMID:
27287537
43.

Decoding the complete arsenal for cellulose and hemicellulose deconstruction in the highly efficient cellulose decomposer Paenibacillus O199.

López-Mondéjar R, Zühlke D, Větrovský T, Becher D, Riedel K, Baldrian P.

Biotechnol Biofuels. 2016 May 14;9:104. doi: 10.1186/s13068-016-0518-x. eCollection 2016.

44.

Evolutionary Events Associated with an Outbreak of Meningococcal Disease in Men Who Have Sex with Men.

Taha MK, Claus H, Lappann M, Veyrier FJ, Otto A, Becher D, Deghmane AE, Frosch M, Hellenbrand W, Hong E, Parent du Châtelet I, Prior K, Harmsen D, Vogel U.

PLoS One. 2016 May 11;11(5):e0154047. doi: 10.1371/journal.pone.0154047. eCollection 2016.

45.

Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems.

López-Mondéjar R, Zühlke D, Becher D, Riedel K, Baldrian P.

Sci Rep. 2016 Apr 29;6:25279. doi: 10.1038/srep25279.

46.

Global analysis of the impact of linezolid onto virulence factor production in S. aureus USA300.

Bonn F, Pané-Farré J, Schlüter R, Schaffer M, Fuchs S, Bernhardt J, Riedel K, Otto A, Völker U, van Dijl JM, Hecker M, Mäder U, Becher D.

Int J Med Microbiol. 2016 May;306(3):131-40. doi: 10.1016/j.ijmm.2016.02.004. Epub 2016 Feb 17.

PMID:
26996810
47.

Methods and applications of absolute protein quantification in microbial systems.

Maaß S, Becher D.

J Proteomics. 2016 Mar 16;136:222-33. doi: 10.1016/j.jprot.2016.01.015. Epub 2016 Jan 26. Review.

PMID:
26825536
48.

Updating the proteome of the uncultivable hemotrophic Mycoplasma suis in experimentally infected pigs.

Dietz S, Lassek C, Mack SL, Ritzmann M, Stadler J, Becher D, Hoelzle K, Riedel K, Hoelzle LE.

Proteomics. 2016 Feb;16(4):609-13. doi: 10.1002/pmic.201500238.

PMID:
26678042
49.

Comparative proteome analysis of Actinoplanes sp. SE50/110 grown with maltose or glucose shows minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters.

Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Wolf T, Zemke T, Wehmeier UF, Hecker M, Kalinowski J, Becher D, Pühler A.

J Proteomics. 2016 Jan 10;131:140-148. doi: 10.1016/j.jprot.2015.10.023. Epub 2015 Oct 25.

PMID:
26597626
50.

Life Stage-specific Proteomes of Legionella pneumophila Reveal a Highly Differential Abundance of Virulence-associated Dot/Icm effectors.

Aurass P, Gerlach T, Becher D, Voigt B, Karste S, Bernhardt J, Riedel K, Hecker M, Flieger A.

Mol Cell Proteomics. 2016 Jan;15(1):177-200. doi: 10.1074/mcp.M115.053579. Epub 2015 Nov 6.

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