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Items: 1 to 50 of 119

1.

Myogenic differentiation triggers PML nuclear body loss and DAXX relocalization to chromocentres.

Salsman J, Rapkin LM, Margam NN, Duncan R, Bazett-Jones DP, Dellaire G.

Cell Death Dis. 2017 Mar 30;8(3):e2724. doi: 10.1038/cddis.2017.151.

2.

DNA methylation is dispensable for changes in global chromatin architecture but required for chromocentre formation in early stem cell differentiation.

Hassan-Zadeh V, Rugg-Gunn P, Bazett-Jones DP.

Chromosoma. 2017 Oct;126(5):605-614. doi: 10.1007/s00412-017-0625-x. Epub 2017 Jan 13.

PMID:
28084535
3.

FANCD2 limits BLM-dependent telomere instability in the alternative lengthening of telomeres pathway.

Root H, Larsen A, Komosa M, Al-Azri F, Li R, Bazett-Jones DP, Stephen Meyn M.

Hum Mol Genet. 2016 Aug 1;25(15):3255-3268. doi: 10.1093/hmg/ddw175. Epub 2016 Jul 17.

PMID:
27427384
4.

A novel single cell method to identify the genetic composition at a single nuclear body.

Anchel D, Ching RW, Cotton R, Li R, Bazett-Jones DP.

Sci Rep. 2016 Jul 8;6:29191. doi: 10.1038/srep29191.

5.

The pluripotency factor Nanog regulates pericentromeric heterochromatin organization in mouse embryonic stem cells.

Novo CL, Tang C, Ahmed K, Djuric U, Fussner E, Mullin NP, Morgan NP, Hayre J, Sienerth AR, Elderkin S, Nishinakamura R, Chambers I, Ellis J, Bazett-Jones DP, Rugg-Gunn PJ.

Genes Dev. 2016 May 1;30(9):1101-15. doi: 10.1101/gad.275685.115. Epub 2016 Apr 28.

6.

MLL5 Orchestrates a Cancer Self-Renewal State by Repressing the Histone Variant H3.3 and Globally Reorganizing Chromatin.

Gallo M, Coutinho FJ, Vanner RJ, Gayden T, Mack SC, Murison A, Remke M, Li R, Takayama N, Desai K, Lee L, Lan X, Park NI, Barsyte-Lovejoy D, Smil D, Sturm D, Kushida MM, Head R, Cusimano MD, Bernstein M, Clarke ID, Dick JE, Pfister SM, Rich JN, Arrowsmith CH, Taylor MD, Jabado N, Bazett-Jones DP, Lupien M, Dirks PB.

Cancer Cell. 2015 Dec 14;28(6):715-729. doi: 10.1016/j.ccell.2015.10.005. Epub 2015 Nov 25.

7.

The histone chaperone DAXX maintains the structural organization of heterochromatin domains.

Rapkin LM, Ahmed K, Dulev S, Li R, Kimura H, Ishov AM, Bazett-Jones DP.

Epigenetics Chromatin. 2015 Oct 21;8:44. doi: 10.1186/s13072-015-0036-2. eCollection 2015.

8.

Coming to terms with chromatin structure.

Even-Faitelson L, Hassan-Zadeh V, Baghestani Z, Bazett-Jones DP.

Chromosoma. 2016 Mar;125(1):95-110. doi: 10.1007/s00412-015-0534-9. Epub 2015 Jul 30. Review.

PMID:
26223534
9.

Unfolding the story of chromatin organization in senescent cells.

Swanson EC, Rapkin LM, Bazett-Jones DP, Lawrence JB.

Nucleus. 2015;6(4):254-60. doi: 10.1080/19491034.2015.1057670. Epub 2015 Jun 24. Review.

10.

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles.

Nott TJ, Petsalaki E, Farber P, Jervis D, Fussner E, Plochowietz A, Craggs TD, Bazett-Jones DP, Pawson T, Forman-Kay JD, Baldwin AJ.

Mol Cell. 2015 Mar 5;57(5):936-947. doi: 10.1016/j.molcel.2015.01.013.

11.

Identification of c-MYC SUMOylation by mass spectrometry.

Kalkat M, Chan PK, Wasylishen AR, Srikumar T, Kim SS, Ponzielli R, Bazett-Jones DP, Raught B, Penn LZ.

PLoS One. 2014 Dec 18;9(12):e115337. doi: 10.1371/journal.pone.0115337. eCollection 2014.

12.

Nano-dissection and sequencing of DNA at single sub-nuclear structures.

Chen BK, Anchel D, Gong Z, Cotton R, Li R, Sun Y, Bazett-Jones DP.

Small. 2014 Aug 27;10(16):3267-74. doi: 10.1002/smll.201400075. Epub 2014 May 3.

PMID:
24799430
13.

Electron spectroscopic tomography of specific chromatin domains.

Even-Faitelson L, Fussner E, Li R, Strauss M, Bazett-Jones DP.

Methods Mol Biol. 2013;1042:181-95. doi: 10.1007/978-1-62703-526-2_13.

PMID:
23980008
14.

Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations.

Visvanathan A, Ahmed K, Even-Faitelson L, Lleres D, Bazett-Jones DP, Lamond AI.

PLoS One. 2013 Jun 26;8(6):e67689. doi: 10.1371/journal.pone.0067689. Print 2013.

15.

CEP120 and SPICE1 cooperate with CPAP in centriole elongation.

Comartin D, Gupta GD, Fussner E, Coyaud É, Hasegan M, Archinti M, Cheung SW, Pinchev D, Lawo S, Raught B, Bazett-Jones DP, Lüders J, Pelletier L.

Curr Biol. 2013 Jul 22;23(14):1360-6. doi: 10.1016/j.cub.2013.06.002. Epub 2013 Jun 27.

16.

Identifying gene locus associations with promyelocytic leukemia nuclear bodies using immuno-TRAP.

Ching RW, Ahmed K, Boutros PC, Penn LZ, Bazett-Jones DP.

J Cell Biol. 2013 Apr 15;201(2):325-35. doi: 10.1083/jcb.201211097.

17.

Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres.

Fussner E, Strauss M, Djuric U, Li R, Ahmed K, Hart M, Ellis J, Bazett-Jones DP.

EMBO Rep. 2012 Nov 6;13(11):992-6.

18.

Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation.

Chandra T, Kirschner K, Thuret JY, Pope BD, Ryba T, Newman S, Ahmed K, Samarajiwa SA, Salama R, Carroll T, Stark R, Janky R, Narita M, Xue L, Chicas A, Nũnez S, Janknecht R, Hayashi-Takanaka Y, Wilson MD, Marshall A, Odom DT, Babu MM, Bazett-Jones DP, Tavaré S, Edwards PA, Lowe SW, Kimura H, Gilbert DM, Narita M.

Mol Cell. 2012 Jul 27;47(2):203-14. doi: 10.1016/j.molcel.2012.06.010. Epub 2012 Jul 12.

19.

A view of the chromatin landscape.

Rapkin LM, Anchel DR, Li R, Bazett-Jones DP.

Micron. 2012 Feb;43(2-3):150-8. doi: 10.1016/j.micron.2011.11.007. Epub 2011 Nov 26. Review.

PMID:
22172345
20.

Constitutive heterochromatin reorganization during somatic cell reprogramming.

Fussner E, Djuric U, Strauss M, Hotta A, Perez-Iratxeta C, Lanner F, Dilworth FJ, Ellis J, Bazett-Jones DP.

EMBO J. 2011 May 4;30(9):1778-89. doi: 10.1038/emboj.2011.96. Epub 2011 Apr 5.

21.

Copy number variation and selection during reprogramming to pluripotency.

Hussein SM, Batada NN, Vuoristo S, Ching RW, Autio R, Närvä E, Ng S, Sourour M, Hämäläinen R, Olsson C, Lundin K, Mikkola M, Trokovic R, Peitz M, Brüstle O, Bazett-Jones DP, Alitalo K, Lahesmaa R, Nagy A, Otonkoski T.

Nature. 2011 Mar 3;471(7336):58-62. doi: 10.1038/nature09871.

PMID:
21368824
22.

Structure and function of the perinucleolar compartment in cancer cells.

Slusarczyk A, Kamath R, Wang C, Anchel D, Pollock C, Lewandowska MA, Fitzpatrick T, Bazett-Jones DP, Huang S.

Cold Spring Harb Symp Quant Biol. 2010;75:599-605. doi: 10.1101/sqb.2010.75.026. Epub 2011 Feb 2.

23.

Changes in chromatin fiber density as a marker for pluripotency.

Fussner E, Ahmed K, Dehghani H, Strauss M, Bazett-Jones DP.

Cold Spring Harb Symp Quant Biol. 2010;75:245-9. doi: 10.1101/sqb.2010.75.012. Epub 2011 Mar 10.

PMID:
21139070
24.

Living without 30nm chromatin fibers.

Fussner E, Ching RW, Bazett-Jones DP.

Trends Biochem Sci. 2011 Jan;36(1):1-6. doi: 10.1016/j.tibs.2010.09.002.

PMID:
20926298
25.

Identification of a molecular recognition feature in the E1A oncoprotein that binds the SUMO conjugase UBC9 and likely interferes with polySUMOylation.

Yousef AF, Fonseca GJ, Pelka P, Ablack JN, Walsh C, Dick FA, Bazett-Jones DP, Shaw GS, Mymryk JS.

Oncogene. 2010 Aug 19;29(33):4693-704. doi: 10.1038/onc.2010.226. Epub 2010 Jun 14.

PMID:
20543865
26.

Global chromatin architecture reflects pluripotency and lineage commitment in the early mouse embryo.

Ahmed K, Dehghani H, Rugg-Gunn P, Fussner E, Rossant J, Bazett-Jones DP.

PLoS One. 2010 May 7;5(5):e10531. doi: 10.1371/journal.pone.0010531.

27.

Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis.

Hiratani I, Ryba T, Itoh M, Rathjen J, Kulik M, Papp B, Fussner E, Bazett-Jones DP, Plath K, Dalton S, Rathjen PD, Gilbert DM.

Genome Res. 2010 Feb;20(2):155-69. doi: 10.1101/gr.099796.109. Epub 2009 Dec 1.

28.
29.

A scientist track investigator program to support early career outcomes for clinician scientists.

Rosenblum ND, Bazett-Jones DP, O'Brodovich H.

J Pediatr. 2009 Nov;155(5):603-4.e1. doi: 10.1016/j.jpeds.2009.07.047. No abstract available.

PMID:
19840610
30.

PML nuclear bodies as sites of epigenetic regulation.

Torok D, Ching RW, Bazett-Jones DP.

Front Biosci (Landmark Ed). 2009 Jan 1;14:1325-36. Review.

PMID:
19273133
31.

Electron spectroscopic imaging of the nuclear landscape.

Ahmed K, Li R, Bazett-Jones DP.

Methods Mol Biol. 2009;464:415-23. doi: 10.1007/978-1-60327-461-6_23.

PMID:
18951198
32.

Global transcription in pluripotent embryonic stem cells.

Efroni S, Duttagupta R, Cheng J, Dehghani H, Hoeppner DJ, Dash C, Bazett-Jones DP, Le Grice S, McKay RD, Buetow KH, Gingeras TR, Misteli T, Meshorer E.

Cell Stem Cell. 2008 May 8;2(5):437-47. doi: 10.1016/j.stem.2008.03.021.

33.

Elucidating chromatin and nuclear domain architecture with electron spectroscopic imaging.

Bazett-Jones DP, Li R, Fussner E, Nisman R, Dehghani H.

Chromosome Res. 2008;16(3):397-412. doi: 10.1007/s10577-008-1237-3. Review.

PMID:
18461480
34.

Beta-globin LCR and intron elements cooperate and direct spatial reorganization for gene therapy.

Buzina A, Lo MY, Moffett A, Hotta A, Fussner E, Bharadwaj RR, Pasceri P, Garcia-Martinez JV, Bazett-Jones DP, Ellis J.

PLoS Genet. 2008 Apr 11;4(4):e1000051. doi: 10.1371/journal.pgen.1000051.

35.

The mobility of Bach2 nuclear foci is regulated by SUMO-1 modification.

Kono K, Harano Y, Hoshino H, Kobayashi M, Bazett-Jones DP, Muto A, Igarashi K, Tashiro S.

Exp Cell Res. 2008 Feb 15;314(4):903-13. doi: 10.1016/j.yexcr.2007.12.013. Epub 2007 Dec 23.

PMID:
18201693
36.

Probing intranuclear environments at the single-molecule level.

Grünwald D, Martin RM, Buschmann V, Bazett-Jones DP, Leonhardt H, Kubitscheck U, Cardoso MC.

Biophys J. 2008 Apr 1;94(7):2847-58. Epub 2007 Dec 7.

37.

Beyond repair foci: subnuclear domains and the cellular response to DNA damage.

Dellaire G, Bazett-Jones DP.

Cell Cycle. 2007 Aug 1;6(15):1864-72. Epub 2007 Jun 11. Review.

PMID:
17660715
38.

The nucleolar channel system of human endometrium is related to endoplasmic reticulum and R-rings.

Kittur N, Zapantis G, Aubuchon M, Santoro N, Bazett-Jones DP, Meier UT.

Mol Biol Cell. 2007 Jun;18(6):2296-304. Epub 2007 Apr 11.

39.
40.

Transcriptional regulation is affected by subnuclear targeting of reporter plasmids to PML nuclear bodies.

Block GJ, Eskiw CH, Dellaire G, Bazett-Jones DP.

Mol Cell Biol. 2006 Dec;26(23):8814-25. Epub 2006 Sep 11.

41.

ALIS are stress-induced protein storage compartments for substrates of the proteasome and autophagy.

Szeto J, Kaniuk NA, Canadien V, Nisman R, Mizushima N, Yoshimori T, Bazett-Jones DP, Brumell JH.

Autophagy. 2006 Jul-Sep;2(3):189-99. Epub 2006 Jul 22.

PMID:
16874109
42.

Changes in chromatin structure and mobility in living cells at sites of DNA double-strand breaks.

Kruhlak MJ, Celeste A, Dellaire G, Fernandez-Capetillo O, Müller WG, McNally JG, Bazett-Jones DP, Nussenzweig A.

J Cell Biol. 2006 Mar 13;172(6):823-34. Epub 2006 Mar 6.

43.

The number of PML nuclear bodies increases in early S phase by a fission mechanism.

Dellaire G, Ching RW, Dehghani H, Ren Y, Bazett-Jones DP.

J Cell Sci. 2006 Mar 15;119(Pt 6):1026-33. Epub 2006 Feb 21.

44.

Mitotic accumulations of PML protein contribute to the re-establishment of PML nuclear bodies in G1.

Dellaire G, Eskiw CH, Dehghani H, Ching RW, Bazett-Jones DP.

J Cell Sci. 2006 Mar 15;119(Pt 6):1034-42. Epub 2006 Feb 21.

45.

Evidence for the direct binding of phosphorylated p53 to sites of DNA breaks in vivo.

Al Rashid ST, Dellaire G, Cuddihy A, Jalali F, Vaid M, Coackley C, Folkard M, Xu Y, Chen BP, Chen DJ, Lilge L, Prise KM, Bazett Jones DP, Bristow RG.

Cancer Res. 2005 Dec 1;65(23):10810-21.

46.

Expression patterns and post-translational modifications associated with mammalian histone H3 variants.

Hake SB, Garcia BA, Duncan EM, Kauer M, Dellaire G, Shabanowitz J, Bazett-Jones DP, Allis CD, Hunt DF.

J Biol Chem. 2006 Jan 6;281(1):559-68. Epub 2005 Nov 2.

47.

A nonribosomal landscape in the nucleolus revealed by the stem cell protein nucleostemin.

Politz JC, Polena I, Trask I, Bazett-Jones DP, Pederson T.

Mol Biol Cell. 2005 Jul;16(7):3401-10. Epub 2005 Apr 27.

48.

PML bodies: a meeting place for genomic loci?

Ching RW, Dellaire G, Eskiw CH, Bazett-Jones DP.

J Cell Sci. 2005 Mar 1;118(Pt 5):847-54.

49.

Organization of chromatin in the interphase mammalian cell.

Dehghani H, Dellaire G, Bazett-Jones DP.

Micron. 2005;36(2):95-108. Review.

PMID:
15629642
50.

In situ imaging and isolation of proteins using dsDNA oligonucleotides.

Dellaire G, Nisman R, Eskiw CH, Bazett-Jones DP.

Nucleic Acids Res. 2004 Nov 23;32(20):e165.

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