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Items: 21

1.

Evaluation of Methods for Inoculating Dry Powder Foods with Salmonella enterica, Enterococcus faecium, or Cronobacter sakazakii.

Wiertzema JR, Borchardt C, Beckstrom AK, Dev K, Chen P, Chen C, Vickers Z, Feirtag J, Lee L, Ruan R, Baumler DJ.

J Food Prot. 2019 May 28:1082-1088. doi: 10.4315/0362-028X.JFP-18-284. [Epub ahead of print]

PMID:
31135183
2.

Draft Genome Sequence of Halobacillus trueperi SS1, Isolated from Lunsu, a Saltwater Body in the Northwest Himalayas.

Gupta S, Sharma P, Dev K, Baumler DJ, Sourirajan A.

Microbiol Resour Announc. 2019 Mar 7;8(10). pii: e01710-18. doi: 10.1128/MRA.01710-18. eCollection 2019 Mar.

3.

Draft Genome Sequence of Hyperthermophilic, Halotolerant Parageobacillus toebii PW12, Isolated from the Tattapani Hot Spring, Northwest Himalayas.

Sharma P, Gupta S, Sourirajan A, Baumler DJ, Dev K.

Microbiol Resour Announc. 2019 Jan 24;8(4). pii: e01163-18. doi: 10.1128/MRA.01163-18. eCollection 2019 Jan.

4.

16S rRNA Gene Amplicon Data Set-Based Bacterial Diversity in a Water-Soil Sample from Pangong Tso Lake, a High-Altitude Grassland Lake of the Northwest Himalayas.

Bisht G, Sourirajan A, Baumler DJ, Dev K.

Microbiol Resour Announc. 2018 Nov 1;7(17). pii: e01192-18. doi: 10.1128/MRA.01192-18. eCollection 2018 Nov.

5.

Segmented Filamentous Bacteria - Metabolism Meets Immunity.

Hedblom GA, Reiland HA, Sylte MJ, Johnson TJ, Baumler DJ.

Front Microbiol. 2018 Aug 24;9:1991. doi: 10.3389/fmicb.2018.01991. eCollection 2018. Review.

6.

Using genome-scale metabolic models to compare serovars of the foodborne pathogen Listeria monocytogenes.

Metz ZP, Ding T, Baumler DJ.

PLoS One. 2018 Jun 7;13(6):e0198584. doi: 10.1371/journal.pone.0198584. eCollection 2018.

7.

Vitamin Variation in Capsicum Spp. Provides Opportunities to Improve Nutritional Value of Human Diets.

Kantar MB, Anderson JE, Lucht SA, Mercer K, Bernau V, Case KA, Le NC, Frederiksen MK, DeKeyser HC, Wong ZZ, Hastings JC, Baumler DJ.

PLoS One. 2016 Aug 17;11(8):e0161464. doi: 10.1371/journal.pone.0161464. eCollection 2016.

8.

Predicting Essential Metabolic Genome Content of Niche-Specific Enterobacterial Human Pathogens during Simulation of Host Environments.

Ding T, Case KA, Omolo MA, Reiland HA, Metz ZP, Diao X, Baumler DJ.

PLoS One. 2016 Feb 17;11(2):e0149423. doi: 10.1371/journal.pone.0149423. eCollection 2016.

9.

Inferring ancient metabolism using ancestral core metabolic models of enterobacteria.

Baumler DJ, Ma B, Reed JL, Perna NT.

BMC Syst Biol. 2013 Jun 11;7:46. doi: 10.1186/1752-0509-7-46.

10.

Using comparative genomics for inquiry-based learning to dissect virulence of Escherichia coli O157:H7 and Yersinia pestis.

Baumler DJ, Banta LM, Hung KF, Schwarz JA, Cabot EL, Glasner JD, Perna NT.

CBE Life Sci Educ. 2012 Spring;11(1):81-93. doi: 10.1187/cbe.10-04-0057.

11.

The evolution of metabolic networks of E. coli.

Baumler DJ, Peplinski RG, Reed JL, Glasner JD, Perna NT.

BMC Syst Biol. 2011 Nov 1;5:182. doi: 10.1186/1752-0509-5-182.

12.

Reduction of Escherichia coli O157:H7 shedding in cattle by addition of chitosan microparticles to feed.

Jeong KC, Kang MY, Kang J, Baumler DJ, Kaspar CW.

Appl Environ Microbiol. 2011 Apr;77(8):2611-6. doi: 10.1128/AEM.02587-10. Epub 2011 Feb 18.

13.

Molybdate treatment and sulfate starvation decrease ATP and DNA levels in Ferroplasma acidarmanu.

Baumler DJ, Hung KF, Jeong KC, Kaspar CW.

Archaea. 2008 Dec;2(3):205-9.

14.

Acid stress damage of DNA is prevented by Dps binding in Escherichia coli O157:H7.

Jeong KC, Hung KF, Baumler DJ, Byrd JJ, Kaspar CW.

BMC Microbiol. 2008 Oct 15;8:181. doi: 10.1186/1471-2180-8-181.

15.

Enteropathogen Resource Integration Center (ERIC): bioinformatics support for research on biodefense-relevant enterobacteria.

Glasner JD, Plunkett G 3rd, Anderson BD, Baumler DJ, Biehl BS, Burland V, Cabot EL, Darling AE, Mau B, Neeno-Eckwall EC, Pot D, Qiu Y, Rissman AI, Worzella S, Zaremba S, Fedorko J, Hampton T, Liss P, Rusch M, Shaker M, Shaull L, Shetty P, Thotakura S, Whitmore J, Blattner FR, Greene JM, Perna NT.

Nucleic Acids Res. 2008 Jan;36(Database issue):D519-23. Epub 2007 Nov 13.

16.

Production of methanethiol and volatile sulfur compounds by the archaeon "Ferroplasma acidarmanus".

Baumler DJ, Hung KF, Jeong KC, Kaspar CW.

Extremophiles. 2007 Nov;11(6):841-51. Epub 2007 Oct 4.

PMID:
17914603
17.

H-NS controls metabolism and stress tolerance in Escherichia coli O157:H7 that influence mouse passage.

Erol I, Jeong KC, Baumler DJ, Vykhodets B, Choi SH, Kaspar CW.

BMC Microbiol. 2006 Aug 15;6:72.

18.

Enhancement of acid tolerance in Zymomonas mobilis by a proton-buffering peptide.

Baumler DJ, Hung KF, Bose JL, Vykhodets BM, Cheng CM, Jeong KC, Kaspar CW.

Appl Biochem Biotechnol. 2006 Jul;134(1):15-26.

PMID:
16891663
19.

dps expression in Escherichia coli O157:H7 requires an extended -10 region and is affected by the cAMP receptor protein.

Jeong KC, Baumler DJ, Kaspar CW.

Biochim Biophys Acta. 2006 Jan-Feb;1759(1-2):51-9. Epub 2006 Mar 9.

PMID:
16574257
20.

Sulfate requirement for heterotrophic growth of "Ferroplasma acidarmanus" strain fer1.

Baumler DJ, Jeong KC, Fox BG, Banfield JF, Kaspar CW.

Res Microbiol. 2005 May;156(4):492-8. Epub 2005 Feb 19.

PMID:
15862447
21.

Contribution of dps to acid stress tolerance and oxidative stress tolerance in Escherichia coli O157:H7.

Choi SH, Baumler DJ, Kaspar CW.

Appl Environ Microbiol. 2000 Sep;66(9):3911-6.

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