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Items: 1 to 50 of 346

1.

3D grating-based X-ray phase-contrast computed tomography for high-resolution quantitative assessment of cartilage: An experimental feasibility study with 3T MRI, 7T MRI and biomechanical correlation.

Herzen J, Karampinos DC, Foehr P, Birnbacher L, Viermetz M, Burgkart R, Baum T, Lohoefer F, Wildgruber M, Schilling F, Willner M, Marschner M, Noël PB, Rummeny EJ, Pfeiffer F, Jungmann PM.

PLoS One. 2019 Feb 14;14(2):e0212106. doi: 10.1371/journal.pone.0212106. eCollection 2019.

2.

DXA-equivalent quantification of bone mineral density using dual-layer spectral CT scout scans.

Laugerette A, Schwaiger BJ, Brown K, Frerking LC, Kopp FK, Mei K, Sellerer T, Kirschke J, Baum T, Gersing AS, Pfeiffer D, Fingerle AA, Rummeny EJ, Proksa R, Noël PB, Pfeiffer F.

Eur Radiol. 2019 Feb 13. doi: 10.1007/s00330-019-6005-6. [Epub ahead of print]

PMID:
30758656
3.

The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes.

Masonbrink R, Maier TR, Muppirala U, Seetharam AS, Lord E, Juvale PS, Schmutz J, Johnson NT, Korkin D, Mitchum MG, Mimee B, den Akker SE, Hudson M, Severin AJ, Baum TJ.

BMC Genomics. 2019 Feb 7;20(1):119. doi: 10.1186/s12864-019-5485-8.

4.

Paraspinal Muscle DTI Metrics Predict Muscle Strength.

Klupp E, Cervantes B, Schlaeger S, Inhuber S, Kreuzpointer F, Schwirtz A, Rohrmeier A, Dieckmeyer M, Hedderich DM, Diefenbach MN, Freitag F, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC, Baum T.

J Magn Reson Imaging. 2019 Feb 5. doi: 10.1002/jmri.26679. [Epub ahead of print]

PMID:
30723976
5.

Heterodera glycines utilizes promiscuous spliced leaders and demonstrates a unique preference for a species-specific spliced leader over C. elegans SL1.

Barnes SN, Masonbrink RE, Maier TR, Seetharam A, Sindhu AS, Severin AJ, Baum TJ.

Sci Rep. 2019 Feb 4;9(1):1356. doi: 10.1038/s41598-018-37857-0.

6.

Homeostasis in the soybean microRNA396-GRF network is essential for productive soybean cyst nematode infections.

Noon JB, Hewezi T, Baum TJ.

J Exp Bot. 2019 Jan 30. doi: 10.1093/jxb/erz022. [Epub ahead of print]

PMID:
30715445
7.

Longitudinal changes in subchondral bone structure as assessed with MRI are associated with functional outcome after high tibial osteotomy.

Gersing AS, Jungmann PM, Schwaiger BJ, Zarnowski J, Kopp FK, Landwehr S, Sauerschnig M, Joseph GB, Imhoff AB, Rummeny EJ, Kirschke JS, Baum T.

J ISAKOS. 2018 Jul 20;3(4):205-212. doi: 10.1136/jisakos-2017-000194. Epub 2018 Jun 28.

PMID:
30705762
8.

Differentiating supraclavicular from gluteal adipose tissue based on simultaneous PDFF and T2 * mapping using a 20-echo gradient-echo acquisition.

Franz D, Diefenbach MN, Treibel F, Weidlich D, Syväri J, Ruschke S, Wu M, Holzapfel C, Drabsch T, Baum T, Eggers H, Rummeny EJ, Hauner H, Karampinos DC.

J Magn Reson Imaging. 2019 Jan 25. doi: 10.1002/jmri.26661. [Epub ahead of print]

PMID:
30684282
9.

Quantitative magnetic resonance imaging of the upper trapezius muscles - assessment of myofascial trigger points in patients with migraine.

Sollmann N, Mathonia N, Weidlich D, Bonfert M, Schroeder SA, Badura KA, Renner T, Trepte-Freisleder F, Ganter C, Krieg SM, Zimmer C, Rummeny EJ, Karampinos DC, Baum T, Landgraf MN, Heinen F.

J Headache Pain. 2019 Jan 18;20(1):8. doi: 10.1186/s10194-019-0960-9.

10.

Gender- and Age-Related Changes in Trunk Muscle Composition Using Chemical Shift Encoding-Based Water⁻Fat MRI.

Burian E, Syväri J, Holzapfel C, Drabsch T, Kirschke JS, Rummeny EJ, Zimmer C, Hauner H, Karampinos DC, Baum T, Franz D.

Nutrients. 2018 Dec 13;10(12). pii: E1972. doi: 10.3390/nu10121972.

11.

Comparative Flavivirus-Host Protein Interaction Mapping Reveals Mechanisms of Dengue and Zika Virus Pathogenesis.

Shah PS, Link N, Jang GM, Sharp PP, Zhu T, Swaney DL, Johnson JR, Von Dollen J, Ramage HR, Satkamp L, Newton B, Hüttenhain R, Petit MJ, Baum T, Everitt A, Laufman O, Tassetto M, Shales M, Stevenson E, Iglesias GN, Shokat L, Tripathi S, Balasubramaniam V, Webb LG, Aguirre S, Willsey AJ, Garcia-Sastre A, Pollard KS, Cherry S, Gamarnik AV, Marazzi I, Taunton J, Fernandez-Sesma A, Bellen HJ, Andino R, Krogan NJ.

Cell. 2018 Dec 13;175(7):1931-1945.e18. doi: 10.1016/j.cell.2018.11.028.

PMID:
30550790
12.

Automated assessment of paraspinal muscle fat composition based on the segmentation of chemical shift encoding-based water/fat-separated images.

Baum T, Lorenz C, Buerger C, Freitag F, Dieckmeyer M, Eggers H, Zimmer C, Karampinos DC, Kirschke JS.

Eur Radiol Exp. 2018 Nov 7;2(1):32. doi: 10.1186/s41747-018-0065-2.

13.

Differentiation of Acute/Subacute versus Old Vertebral Fractures in Multislice Detector Computed Tomography: Is Magnetic Resonance Imaging Always Needed?

Hedderich DM, Maegerlein C, Baum T, Hapfelmeier A, Ryang YM, Zimmer C, Kirschke JS.

World Neurosurg. 2019 Feb;122:e676-e683. doi: 10.1016/j.wneu.2018.10.121. Epub 2018 Oct 29.

PMID:
30385360
14.

An Effector from the Cyst Nematode Heterodera schachtii Derepresses Host rRNA Genes by Altering Histone Acetylation.

Vijayapalani P, Hewezi T, Pontvianne F, Baum TJ.

Plant Cell. 2018 Nov;30(11):2795-2812. doi: 10.1105/tpc.18.00570. Epub 2018 Oct 17.

15.

Associations Between Lumbar Vertebral Bone Marrow and Paraspinal Muscle Fat Compositions-An Investigation by Chemical Shift Encoding-Based Water-Fat MRI.

Sollmann N, Dieckmeyer M, Schlaeger S, Rohrmeier A, Syvaeri J, Diefenbach MN, Weidlich D, Ruschke S, Klupp E, Franz D, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC, Baum T.

Front Endocrinol (Lausanne). 2018 Sep 28;9:563. doi: 10.3389/fendo.2018.00563. eCollection 2018.

16.

On the sensitivity of quantitative susceptibility mapping for measuring trabecular bone density.

Diefenbach MN, Meineke J, Ruschke S, Baum T, Gersing A, Karampinos DC.

Magn Reson Med. 2019 Mar;81(3):1739-1754. doi: 10.1002/mrm.27531. Epub 2018 Sep 28.

PMID:
30265769
17.

T2-relaxation time of cartilage repair tissue is associated with bone remodeling after spongiosa-augmented matrix-associated autologous chondrocyte implantation.

Gersing AS, Feuerriegel G, Holwein C, Suchowierski J, Karampinos DC, Haller B, Baum T, Schwaiger BJ, Kirschke JS, Rummeny EJ, Imhoff AB, Woertler K, Jungmann PM.

Osteoarthritis Cartilage. 2019 Jan;27(1):90-98. doi: 10.1016/j.joca.2018.08.023. Epub 2018 Sep 22.

PMID:
30248504
18.

Effect of Statistically Iterative Image Reconstruction on Vertebral Bone Strength Prediction Using Bone Mineral Density and Finite Element Modeling: A Preliminary Study.

Anitha D, Subburaj K, Kopp FK, Mei K, Foehr P, Burgkart R, Sollmann N, Maegerlein C, Kirschke JS, Noel PB, Baum T.

J Comput Assist Tomogr. 2019 Jan/Feb;43(1):61-65. doi: 10.1097/RCT.0000000000000788.

PMID:
30211797
19.

Effects of virtual tube current reduction and sparse sampling on MDCT-based femoral BMD measurements.

Sollmann N, Mei K, Schwaiger BJ, Gersing AS, Kopp FK, Bippus R, Maegerlein C, Zimmer C, Rummeny EJ, Kirschke JS, Noël PB, Baum T.

Osteoporos Int. 2018 Dec;29(12):2685-2692. doi: 10.1007/s00198-018-4675-6. Epub 2018 Aug 24.

20.

MDCT-based Finite Element Analysis of Vertebral Fracture Risk: What Dose is Needed?

Anitha D, Mei K, Dieckmeyer M, Kopp FK, Sollmann N, Zimmer C, Kirschke JS, Noel PB, Baum T, Subburaj K.

Clin Neuroradiol. 2018 Aug 21. doi: 10.1007/s00062-018-0722-0. [Epub ahead of print]

PMID:
30132090
21.

Correction to: STATAWAARS: a promoter motif associated with spatial expression in the major effector-producing tissues of the plantparasitic nematode Bursaphelenchus xylophilus.

Espada M, den Akker SE, Maier T, Vijayapalani P, Baum T, Mota M, Jones JT.

BMC Genomics. 2018 Aug 10;19(1):603. doi: 10.1186/s12864-018-4990-5.

22.

Reliable semiquantitative whole-joint MRI score for the shoulder joint: The shoulder osteoarthritis severity (SOAS) score.

Jungmann PM, Gersing AS, Woertler K, Dietrich TJ, Baum T, Baumann F, Bensler S.

J Magn Reson Imaging. 2018 Aug 5. doi: 10.1002/jmri.26251. [Epub ahead of print]

PMID:
30079543
23.

STATAWAARS: a promoter motif associated with spatial expression in the major effector-producing tissues of the plant-parasitic nematode Bursaphelenchus xylophilus.

Espada M, Eves-van den Akker S, Maier T, Vijayapalani P, Baum T, Mota M, Jones JT.

BMC Genomics. 2018 Jul 27;19(1):553. doi: 10.1186/s12864-018-4908-2. Erratum in: BMC Genomics. 2018 Aug 10;19(1):603.

24.

The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders.

Willsey AJ, Morris MT, Wang S, Willsey HR, Sun N, Teerikorpi N, Baum TB, Cagney G, Bender KJ, Desai TA, Srivastava D, Davis GW, Doudna J, Chang E, Sohal V, Lowenstein DH, Li H, Agard D, Keiser MJ, Shoichet B, von Zastrow M, Mucke L, Finkbeiner S, Gan L, Sestan N, Ward ME, Huttenhain R, Nowakowski TJ, Bellen HJ, Frank LM, Khokha MK, Lifton RP, Kampmann M, Ideker T, State MW, Krogan NJ.

Cell. 2018 Jul 26;174(3):505-520. doi: 10.1016/j.cell.2018.06.016. Review.

PMID:
30053424
25.

Improved Brachial Plexus Visualization Using an Adiabatic iMSDE-Prepared STIR 3D TSE.

Klupp E, Cervantes B, Sollmann N, Treibel F, Weidlich D, Baum T, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC.

Clin Neuroradiol. 2018 Jul 23. doi: 10.1007/s00062-018-0706-0. [Epub ahead of print]

PMID:
30039352
26.

Association of paraspinal muscle water-fat MRI-based measurements with isometric strength measurements.

Schlaeger S, Inhuber S, Rohrmeier A, Dieckmeyer M, Freitag F, Klupp E, Weidlich D, Feuerriegel G, Kreuzpointner F, Schwirtz A, Rummeny EJ, Zimmer C, Kirschke JS, Karampinos DC, Baum T.

Eur Radiol. 2019 Feb;29(2):599-608. doi: 10.1007/s00330-018-5631-8. Epub 2018 Jul 16.

PMID:
30014202
27.

Acute infarction after mechanical thrombectomy is better delineable in virtual non-contrast compared to conventional images using a dual-layer spectral CT.

Riederer I, Fingerle AA, Baum T, Kirschke JS, Rummeny EJ, Noël PB, Pfeiffer D.

Sci Rep. 2018 Jun 19;8(1):9329. doi: 10.1038/s41598-018-27437-7.

28.

Thigh muscle segmentation of chemical shift encoding-based water-fat magnetic resonance images: The reference database MyoSegmenTUM.

Schlaeger S, Freitag F, Klupp E, Dieckmeyer M, Weidlich D, Inhuber S, Deschauer M, Schoser B, Bublitz S, Montagnese F, Zimmer C, Rummeny EJ, Karampinos DC, Kirschke JS, Baum T.

PLoS One. 2018 Jun 7;13(6):e0198200. doi: 10.1371/journal.pone.0198200. eCollection 2018.

29.

Magnetic Resonance Imaging of Adipose Tissue in Metabolic Dysfunction.

Franz D, Syväri J, Weidlich D, Baum T, Rummeny EJ, Karampinos DC.

Rofo. 2018 Dec;190(12):1121-1130. doi: 10.1055/a-0612-8006. Epub 2018 Jun 6. Review.

30.

Quasi-Orbital Angular Momentum (Q-OAM) Generated by Quasi-Circular Array Antenna (QCA).

Fouda RM, Baum TC, Ghorbani K.

Sci Rep. 2018 May 30;8(1):8363. doi: 10.1038/s41598-018-26733-6.

31.

Three-material decomposition with dual-layer spectral CT compared to MRI for the detection of bone marrow edema in patients with acute vertebral fractures.

Schwaiger BJ, Gersing AS, Hammel J, Mei K, Kopp FK, Kirschke JS, Rummeny EJ, Wörtler K, Baum T, Noël PB.

Skeletal Radiol. 2018 Nov;47(11):1533-1540. doi: 10.1007/s00256-018-2981-x. Epub 2018 May 25.

32.

The novel cyst nematode effector protein 30D08 targets host nuclear functions to alter gene expression in feeding sites.

Verma A, Lee C, Morriss S, Odu F, Kenning C, Rizzo N, Spollen WG, Lin M, McRae AG, Givan SA, Hewezi T, Hussey R, Davis EL, Baum TJ, Mitchum MG.

New Phytol. 2018 Jul;219(2):697-713. doi: 10.1111/nph.15179. Epub 2018 May 4.

PMID:
29726613
33.

The plant-parasitic cyst nematode effector GLAND4 is a DNA-binding protein.

Barnes SN, Wram CL, Mitchum MG, Baum TJ.

Mol Plant Pathol. 2018 Oct;19(10):2263-2276. doi: 10.1111/mpp.12697. Epub 2018 Jul 26.

PMID:
29719112
34.

Anatomical Variation of Age-Related Changes in Vertebral Bone Marrow Composition Using Chemical Shift Encoding-Based Water-Fat Magnetic Resonance Imaging.

Baum T, Rohrmeier A, Syväri J, Diefenbach MN, Franz D, Dieckmeyer M, Scharr A, Hauner H, Ruschke S, Kirschke JS, Karampinos DC.

Front Endocrinol (Lausanne). 2018 Apr 4;9:141. doi: 10.3389/fendo.2018.00141. eCollection 2018.

35.

Multidetector Computed Tomography Imaging: Effect of Sparse Sampling and Iterative Reconstruction on Trabecular Bone Microstructure.

Mookiah MRK, Subburaj K, Mei K, Kopp FK, Kaesmacher J, Jungmann PM, Foehr P, Noel PB, Kirschke JS, Baum T.

J Comput Assist Tomogr. 2018 May/Jun;42(3):441-447. doi: 10.1097/RCT.0000000000000710.

PMID:
29489591
36.

Identification of candidate effector genes of Pratylenchus penetrans.

Vieira P, Maier TR, Eves-van den Akker S, Howe DK, Zasada I, Baum TJ, Eisenback JD, Kamo K.

Mol Plant Pathol. 2018 Feb 9. doi: 10.1111/mpp.12666. [Epub ahead of print]

PMID:
29424950
37.

Novel global effector mining from the transcriptome of early life stages of the soybean cyst nematode Heterodera glycines.

Gardner M, Dhroso A, Johnson N, Davis EL, Baum TJ, Korkin D, Mitchum MG.

Sci Rep. 2018 Feb 6;8(1):2505. doi: 10.1038/s41598-018-20536-5.

38.

"Cyst-ained" research into Heterodera parasitism.

Juvale PS, Baum TJ.

PLoS Pathog. 2018 Feb 1;14(2):e1006791. doi: 10.1371/journal.ppat.1006791. eCollection 2018 Feb. Review. No abstract available.

39.

Feasibility of opportunistic osteoporosis screening in routine contrast-enhanced multi detector computed tomography (MDCT) using texture analysis.

Mookiah MRK, Rohrmeier A, Dieckmeyer M, Mei K, Kopp FK, Noel PB, Kirschke JS, Baum T, Subburaj K.

Osteoporos Int. 2018 Apr;29(4):825-835. doi: 10.1007/s00198-017-4342-3. Epub 2018 Jan 10.

PMID:
29322221
40.

Sleep and hypothalamic pituitary adrenal axis responses to metyrapone in posttraumatic stress disorder.

Inslicht SS, Rao MN, Richards A, O'Donovan A, Gibson CJ, Baum T, Metzler TJ, Neylan TC.

Psychoneuroendocrinology. 2018 Feb;88:136-143. doi: 10.1016/j.psyneuen.2017.12.002. Epub 2017 Dec 7.

41.

Multi-level hp-finite cell method for embedded interface problems with application in biomechanics.

Elhaddad M, Zander N, Bog T, Kudela L, Kollmannsberger S, Kirschke J, Baum T, Ruess M, Rank E.

Int J Numer Method Biomed Eng. 2018 Apr;34(4):e2951. doi: 10.1002/cnm.2951. Epub 2018 Feb 13.

PMID:
29265715
42.

Bone mineral density measurements in vertebral specimens and phantoms using dual-layer spectral computed tomography.

Mei K, Schwaiger BJ, Kopp FK, Ehn S, Gersing AS, Kirschke JS, Muenzel D, Fingerle AA, Rummeny EJ, Pfeiffer F, Baum T, Noël PB.

Sci Rep. 2017 Dec 13;7(1):17519. doi: 10.1038/s41598-017-17855-4.

43.

Suppression or Activation of Immune Responses by Predicted Secreted Proteins of the Soybean Rust Pathogen Phakopsora pachyrhizi.

Qi M, Grayczyk JP, Seitz JM, Lee Y, Link TI, Choi D, Pedley KF, Voegele RT, Baum TJ, Whitham SA.

Mol Plant Microbe Interact. 2018 Jan;31(1):163-174. doi: 10.1094/MPMI-07-17-0173-FI. Epub 2017 Nov 16.

PMID:
29144203
44.

Association of proton density fat fraction in adipose tissue with imaging-based and anthropometric obesity markers in adults.

Franz D, Weidlich D, Freitag F, Holzapfel C, Drabsch T, Baum T, Eggers H, Witte A, Rummeny EJ, Hauner H, Karampinos DC.

Int J Obes (Lond). 2018 Feb;42(2):175-182. doi: 10.1038/ijo.2017.194. Epub 2017 Aug 14.

45.

Regional analysis of age-related local bone loss in the spine of a healthy population using 3D voxel-based modeling.

Valentinitsch A, Trebeschi S, Alarcón E, Baum T, Kaesmacher J, Zimmer C, Lorenz C, Kirschke JS.

Bone. 2017 Oct;103:233-240. doi: 10.1016/j.bone.2017.06.013. Epub 2017 Jul 14.

PMID:
28716553
46.

Is multidetector CT-based bone mineral density and quantitative bone microstructure assessment at the spine still feasible using ultra-low tube current and sparse sampling?

Mei K, Kopp FK, Bippus R, Köhler T, Schwaiger BJ, Gersing AS, Fehringer A, Sauter A, Münzel D, Pfeiffer F, Rummeny EJ, Kirschke JS, Noël PB, Baum T.

Eur Radiol. 2017 Dec;27(12):5261-5271. doi: 10.1007/s00330-017-4904-y. Epub 2017 Jun 21.

47.

Effects of ketamine on the unconditioned and conditioned locomotor activity of preadolescent and adolescent rats: impact of age, sex, and drug dose.

McDougall SA, Moran AE, Baum TJ, Apodaca MG, Real V.

Psychopharmacology (Berl). 2017 Sep;234(18):2683-2696. doi: 10.1007/s00213-017-4660-3. Epub 2017 Jun 7.

48.

Quantitative MRI and spectroscopy of bone marrow.

Karampinos DC, Ruschke S, Dieckmeyer M, Diefenbach M, Franz D, Gersing AS, Krug R, Baum T.

J Magn Reson Imaging. 2018 Feb;47(2):332-353. doi: 10.1002/jmri.25769. Epub 2017 Jun 1. Review.

49.

Cooperative Regulatory Functions of miR858 and MYB83 during Cyst Nematode Parasitism.

Piya S, Kihm C, Rice JH, Baum TJ, Hewezi T.

Plant Physiol. 2017 Jul;174(3):1897-1912. doi: 10.1104/pp.17.00273. Epub 2017 May 16.

50.

Hypnosis for Symptom Control in Cancer Patients at the End-of-Life: A Systematic Review.

Montgomery GH, Sucala M, Baum T, Schnur JB.

Int J Clin Exp Hypn. 2017 Jul-Sep;65(3):296-307. doi: 10.1080/00207144.2017.1314728. Review.

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