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Items: 20

1.

CG dinucleotides enhance promoter activity independent of DNA methylation.

Hartl D, Krebs AR, Grand RS, Baubec T, Isbel L, Wirbelauer C, Burger L, Schübeler D.

Genome Res. 2019 Apr;29(4):554-563. doi: 10.1101/gr.241653.118. Epub 2019 Feb 1.

2.

Efficient Pre-mRNA Cleavage Prevents Replication-Stress-Associated Genome Instability.

Teloni F, Michelena J, Lezaja A, Kilic S, Ambrosi C, Menon S, Dobrovolna J, Imhof R, Janscak P, Baubec T, Altmeyer M.

Mol Cell. 2019 Feb 21;73(4):670-683.e12. doi: 10.1016/j.molcel.2018.11.036. Epub 2019 Jan 10.

3.

Genome-Wide Profiling of DNA Methyltransferases in Mammalian Cells.

Manzo M, Ambrosi C, Baubec T.

Methods Mol Biol. 2018;1766:157-174. doi: 10.1007/978-1-4939-7768-0_9.

PMID:
29605852
4.

Binding of high mobility group A proteins to the mammalian genome occurs as a function of AT-content.

Colombo DF, Burger L, Baubec T, Schübeler D.

PLoS Genet. 2017 Dec 21;13(12):e1007102. doi: 10.1371/journal.pgen.1007102. eCollection 2017 Dec.

5.

Isoform-specific localization of DNMT3A regulates DNA methylation fidelity at bivalent CpG islands.

Manzo M, Wirz J, Ambrosi C, Villaseñor R, Roschitzki B, Baubec T.

EMBO J. 2017 Dec 1;36(23):3421-3434. doi: 10.15252/embj.201797038. Epub 2017 Oct 26.

6.

Dynamics and Context-Dependent Roles of DNA Methylation.

Ambrosi C, Manzo M, Baubec T.

J Mol Biol. 2017 May 19;429(10):1459-1475. doi: 10.1016/j.jmb.2017.02.008. Epub 2017 Feb 16. Review.

PMID:
28214512
7.

Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin.

Hiragami-Hamada K, Soeroes S, Nikolov M, Wilkins B, Kreuz S, Chen C, De La Rosa-Velázquez IA, Zenn HM, Kost N, Pohl W, Chernev A, Schwarzer D, Jenuwein T, Lorincz M, Zimmermann B, Walla PJ, Neumann H, Baubec T, Urlaub H, Fischle W.

Nat Commun. 2016 Apr 19;7:11310. doi: 10.1038/ncomms11310.

8.

Analysis of Chromatin ADP-Ribosylation at the Genome-wide Level and at Specific Loci by ADPr-ChAP.

Bartolomei G, Leutert M, Manzo M, Baubec T, Hottiger MO.

Mol Cell. 2016 Feb 4;61(3):474-485. doi: 10.1016/j.molcel.2015.12.025. Epub 2016 Jan 28.

9.

Repair of DNA Damage Induced by the Cytidine Analog Zebularine Requires ATR and ATM in Arabidopsis.

Liu CH, Finke A, Díaz M, Rozhon W, Poppenberger B, Baubec T, Pecinka A.

Plant Cell. 2015 Jun;27(6):1788-800. doi: 10.1105/tpc.114.135467. Epub 2015 May 28.

10.

Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation.

Baubec T, Colombo DF, Wirbelauer C, Schmidt J, Burger L, Krebs AR, Akalin A, Schübeler D.

Nature. 2015 Apr 9;520(7546):243-7. doi: 10.1038/nature14176. Epub 2015 Jan 21.

PMID:
25607372
11.

Genomic patterns and context specific interpretation of DNA methylation.

Baubec T, Schübeler D.

Curr Opin Genet Dev. 2014 Apr;25:85-92. doi: 10.1016/j.gde.2013.11.015. Epub 2014 Mar 7. Review.

PMID:
24614011
12.

Meristem-specific expression of epigenetic regulators safeguards transposon silencing in Arabidopsis.

Baubec T, Finke A, Mittelsten Scheid O, Pecinka A.

EMBO Rep. 2014 Apr;15(4):446-52. doi: 10.1002/embr.201337915. Epub 2014 Feb 20.

13.

Methylation-dependent and -independent genomic targeting principles of the MBD protein family.

Baubec T, Ivánek R, Lienert F, Schübeler D.

Cell. 2013 Apr 11;153(2):480-92. doi: 10.1016/j.cell.2013.03.011.

14.

Genomic prevalence of heterochromatic H3K9me2 and transcription do not discriminate pluripotent from terminally differentiated cells.

Lienert F, Mohn F, Tiwari VK, Baubec T, Roloff TC, Gaidatzis D, Stadler MB, Schübeler D.

PLoS Genet. 2011 Jun;7(6):e1002090. doi: 10.1371/journal.pgen.1002090. Epub 2011 Jun 2.

15.

Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis.

Pecinka A, Dinh HQ, Baubec T, Rosa M, Lettner N, Mittelsten Scheid O.

Plant Cell. 2010 Sep;22(9):3118-29. doi: 10.1105/tpc.110.078493. Epub 2010 Sep 28.

16.

Cooperation of multiple chromatin modifications can generate unanticipated stability of epigenetic States in Arabidopsis.

Baubec T, Dinh HQ, Pecinka A, Rakic B, Rozhon W, Wohlrab B, von Haeseler A, Mittelsten Scheid O.

Plant Cell. 2010 Jan;22(1):34-47. doi: 10.1105/tpc.109.072819. Epub 2010 Jan 22.

17.

Effective, homogeneous and transient interference with cytosine methylation in plant genomic DNA by zebularine.

Baubec T, Pecinka A, Rozhon W, Mittelsten Scheid O.

Plant J. 2009 Feb;57(3):542-54. doi: 10.1111/j.1365-313X.2008.03699.x. Epub 2008 Oct 30.

18.

Rapid quantification of global DNA methylation by isocratic cation exchange high-performance liquid chromatography.

Rozhon W, Baubec T, Mayerhofer J, Mittelsten Scheid O, Jonak C.

Anal Biochem. 2008 Apr 15;375(2):354-60. doi: 10.1016/j.ab.2008.01.001. Epub 2008 Jan 9.

PMID:
18249178
19.

Medea in full self-control.

Baubec T, Mittelsten Scheid O.

Trends Plant Sci. 2006 Oct;11(10):469-71. Epub 2006 Sep 1.

PMID:
16949328
20.

The Air noncoding RNA: an imprinted cis-silencing transcript.

Braidotti G, Baubec T, Pauler F, Seidl C, Smrzka O, Stricker S, Yotova I, Barlow DP.

Cold Spring Harb Symp Quant Biol. 2004;69:55-66. Review. No abstract available.

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