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Matrix Models of Hierarchical Demography: Linking Group- and Population-Level Dynamics in Cooperative Breeders.

Bateman AW, Ozgul A, Krkošek M, Clutton-Brock TH.

Am Nat. 2018 Aug;192(2):188-203. doi: 10.1086/698217. Epub 2018 Jun 11.


A randomized controlled trial of a mentalization-based intervention (MBT-FACTS) for families of people with borderline personality disorder.

Bateman A, Fonagy P.

Personal Disord. 2018 Jul 12. doi: 10.1037/per0000298. [Epub ahead of print]


Correction: Software-aided approach to investigate peptide structure and metabolic susceptibility of amide bonds in peptide drugs based on high resolution mass spectrometry.

Radchenko T, Brink A, Siegrist Y, Kochansky C, Bateman A, Fontaine F, Morettoni L, Zamora I.

PLoS One. 2018 Jul 11;13(7):e0200772. doi: 10.1371/journal.pone.0200772. eCollection 2018.


Oust the louse: leaping behaviour removes sea lice from wild juvenile sockeye salmon Oncorhynchus nerka.

Atkinson EM, Bateman AW, Dill LM, Krkošek M, Reynolds JD, Godwin SC.

J Fish Biol. 2018 Jun 28. doi: 10.1111/jfb.13684. [Epub ahead of print]


Methods to Investigate the Roles of Progranulin in Angiogenesis Using In Vitro Strategies and Transgenic Mouse Models.

Toh H, Daniels E, Bateman A.

Methods Mol Biol. 2018;1806:329-360. doi: 10.1007/978-1-4939-8559-3_22.


Methods for Expression and Purification of Biologically Active Recombinant Progranulin.

Zhao CY, Bateman A.

Methods Mol Biol. 2018;1806:35-49. doi: 10.1007/978-1-4939-8559-3_3.


Chromatographic Methods for the Purification of Granulin Peptides.

Bateman A, Chitramuthu BP, Bennett HPJ.

Methods Mol Biol. 2018;1806:19-34. doi: 10.1007/978-1-4939-8559-3_2.


A Brief Overview of Progranulin in Health and Disease.

Bateman A, Cheung ST, Bennett HPJ.

Methods Mol Biol. 2018;1806:3-15. doi: 10.1007/978-1-4939-8559-3_1.


Viability of Candida auris and other Candida species after various MALDI-TOF extraction protocols.

Sterkel A, Bateman A, Valley A, Warshauer D.

J Clin Microbiol. 2018 Jun 27. pii: JCM.00886-18. doi: 10.1128/JCM.00886-18. [Epub ahead of print]


Non-Coding RNA Analysis Using the Rfam Database.

Kalvari I, Nawrocki EP, Argasinska J, Quinones-Olvera N, Finn RD, Bateman A, Petrov AI.

Curr Protoc Bioinformatics. 2018 Jun;62(1):e51. doi: 10.1002/cpbi.51. Epub 2018 Jun 5.


Cell-surface signatures of immune dysfunction risk-stratify critically ill patients: INFECT study.

Conway Morris A, Datta D, Shankar-Hari M, Stephen J, Weir CJ, Rennie J, Antonelli J, Bateman A, Warner N, Judge K, Keenan J, Wang A, Burpee T, Brown KA, Lewis SM, Mare T, Roy AI, Hulme G, Dimmick I, Rossi AG, Simpson AJ, Walsh TS.

Intensive Care Med. 2018 May;44(5):627-635. doi: 10.1007/s00134-018-5247-0. Epub 2018 Jun 7.


Methylphenidate-mediated motor control network enhancement in patients with traumatic brain injury.

Dorer CL, Manktelow AE, Allanson J, Sahakian BJ, Pickard JD, Bateman A, Menon DK, Stamatakis EA.

Brain Inj. 2018;32(8):1040-1049. doi: 10.1080/02699052.2018.1469166. Epub 2018 May 8.


Structure dissection of zebrafish progranulins identifies a well-folded granulin/epithelin module protein with pro-cell survival activities.

Wang P, Chitramuthu B, Bateman A, Bennett HPJ, Xu P, Ni F.

Protein Sci. 2018 May 7. doi: 10.1002/pro.3441. [Epub ahead of print]


Gene Unprediction with Spurio: A tool to identify spurious protein sequences.

Höps W, Jeffryes M, Bateman A.

F1000Res. 2018 Mar 2;7:261. doi: 10.12688/f1000research.14050.1. eCollection 2018.


Clinical impact of a Multiplex Gastrointestinal PCR Panel in Patients with Acute Gastroenteritis.

Cybulski RJ Jr, Bateman AC, Bourassa L, Bryan A, Beail B, Matsumoto J, Cookson BT, Fang FC.

Clin Infect Dis. 2018 Apr 25. doi: 10.1093/cid/ciy357. [Epub ahead of print]


Building a strong European alliance for personality disorder research and intervention.

Mehlum L, Bateman A, Dalewijk HJ, Doering S, Kaera A, Moran PA, Renneberg B, Ribaudi JS, Simonsen S, Wilberg T, Bohus M.

Borderline Personal Disord Emot Dysregul. 2018 Apr 2;5:7. doi: 10.1186/s40479-018-0082-z. eCollection 2018.


Evaluation of NeuroPage as a memory aid for people with multiple sclerosis: A randomised controlled trial.

Goodwin RA, Lincoln NB, das Nair R, Bateman A.

Neuropsychol Rehabil. 2018 Mar 20:1-17. doi: 10.1080/09602011.2018.1447973. [Epub ahead of print]


Highly Viscous States Affect the Browning of Atmospheric Organic Particulate Matter.

Liu P, Li YJ, Wang Y, Bateman AP, Zhang Y, Gong Z, Bertram AK, Martin ST.

ACS Cent Sci. 2018 Feb 28;4(2):207-215. doi: 10.1021/acscentsci.7b00452. Epub 2018 Jan 17.


Pharmacological management of agitation among individuals with moderate to severe acquired brain injury: A systematic review.

Mehta S, McIntyre A, Janzen S, Iruthayarajah J, Bateman A, Teasell R.

Brain Inj. 2018;32(3):287-296. doi: 10.1080/02699052.2017.1419377. Epub 2018 Jan 23.


The HMMER Web Server for Protein Sequence Similarity Search.

Prakash A, Jeffryes M, Bateman A, Finn RD.

Curr Protoc Bioinformatics. 2017 Dec 8;60:3.15.1-3.15.23. doi: 10.1002/cpbi.40.


Native-plant amendments and topsoil addition enhance soil function in post-mining arid grasslands.

Kneller T, Harris RJ, Bateman A, Muñoz-Rojas M.

Sci Total Environ. 2018 Apr 15;621:744-752. doi: 10.1016/j.scitotenv.2017.11.219. Epub 2017 Dec 1.


The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database.

Rawlings ND, Barrett AJ, Thomas PD, Huang X, Bateman A, Finn RD.

Nucleic Acids Res. 2018 Jan 4;46(D1):D624-D632. doi: 10.1093/nar/gkx1134.


Laboratory Focus on Improving the Culture of Biosafety: Statewide Risk Assessment of Clinical Laboratories That Process Specimens for Microbiologic Analysis.

Munson E, Bowles EJ, Dern R, Beck E, Podzorski RP, Bateman AC, Block TK, Kropp JL, Radke T, Siebers K, Simmons B, Smith MA, Spray-Larson F, Warshauer DM.

J Clin Microbiol. 2017 Dec 26;56(1). pii: e01569-17. doi: 10.1128/JCM.01569-17. Print 2018 Jan.


Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families.

Kalvari I, Argasinska J, Quinones-Olvera N, Nawrocki EP, Rivas E, Eddy SR, Bateman A, Finn RD, Petrov AI.

Nucleic Acids Res. 2018 Jan 4;46(D1):D335-D342. doi: 10.1093/nar/gkx1038.


Mutations in GPAA1, Encoding a GPI Transamidase Complex Protein, Cause Developmental Delay, Epilepsy, Cerebellar Atrophy, and Osteopenia.

Nguyen TTM, Murakami Y, Sheridan E, Ehresmann S, Rousseau J, St-Denis A, Chai G, Ajeawung NF, Fairbrother L, Reimschisel T, Bateman A, Berry-Kravis E, Xia F, Tardif J, Parry DA, Logan CV, Diggle C, Bennett CP, Hattingh L, Rosenfeld JA, Perry MS, Parker MJ, Le Deist F, Zaki MS, Ignatius E, Isohanni P, Lönnqvist T, Carroll CJ, Johnson CA, Gleeson JG, Kinoshita T, Campeau PM.

Am J Hum Genet. 2017 Nov 2;101(5):856-865. doi: 10.1016/j.ajhg.2017.09.020.


Software-aided approach to investigate peptide structure and metabolic susceptibility of amide bonds in peptide drugs based on high resolution mass spectrometry.

Radchenko T, Brink A, Siegrist Y, Kochansky C, Bateman A, Fontaine F, Morettoni L, Zamora I.

PLoS One. 2017 Nov 1;12(11):e0186461. doi: 10.1371/journal.pone.0186461. eCollection 2017. Erratum in: PLoS One. 2018 Jul 11;13(7):e0200772.


The Post-Injury Psychological Sequelae of High-level Jamaican Athletes: Exploration of a Post-Traumatic Stress Disorder-Self-Efficacy Conceptualisation.

Bateman A, Morgan KAD.

J Sport Rehabil. 2017 Nov 1:1-33. doi: 10.1123/jsr.2017-0140. [Epub ahead of print]


Progranulin: a new avenue towards the understanding and treatment of neurodegenerative disease.

Chitramuthu BP, Bennett HPJ, Bateman A.

Brain. 2017 Dec 1;140(12):3081-3104. doi: 10.1093/brain/awx198. Review.


On expert curation and scalability: UniProtKB/Swiss-Prot as a case study.

Poux S, Arighi CN, Magrane M, Bateman A, Wei CH, Lu Z, Boutet E, Bye-A-Jee H, Famiglietti ML, Roechert B, UniProt Consortium T.

Bioinformatics. 2017 Nov 1;33(21):3454-3460. doi: 10.1093/bioinformatics/btx439.


A mentalization-based approach to common factors in the treatment of borderline personality disorder.

Bateman A, Campbell C, Luyten P, Fonagy P.

Curr Opin Psychol. 2018 Jun;21:44-49. doi: 10.1016/j.copsyc.2017.09.005. Epub 2017 Sep 14. Review.


Conservation and Recombination in the Genome Sequence of Haemophilus influenzae Type f WAPHL1.

Bateman AC, Perez-Osorio AC, Li Z, Tran M, Greninger AL.

Genome Announc. 2017 Sep 21;5(38). pii: e00929-17. doi: 10.1128/genomeA.00929-17.


ROC-king onwards: intraepithelial lymphocyte counts, distribution & role in coeliac disease mucosal interpretation.

Rostami K, Marsh MN, Johnson MW, Mohaghegh H, Heal C, Holmes G, Ensari A, Aldulaimi D, Bancel B, Bassotti G, Bateman A, Becheanu G, Bozzola A, Carroccio A, Catassi C, Ciacci C, Ciobanu A, Danciu M, Derakhshan MH, Elli L, Ferrero S, Fiorentino M, Fiorino M, Ganji A, Ghaffarzadehgan K, Going JJ, Ishaq S, Mandolesi A, Mathews S, Maxim R, Mulder CJ, Neefjes-Borst A, Robert M, Russo I, Rostami-Nejad M, Sidoni A, Sotoudeh M, Villanacci V, Volta U, Zali MR, Srivastava A.

Gut. 2017 Dec;66(12):2080-2086. doi: 10.1136/gutjnl-2017-314297. Epub 2017 Sep 11.


Cleanliness in context: reconciling hygiene with a modern microbial perspective.

Vandegrift R, Bateman AC, Siemens KN, Nguyen M, Wilson HE, Green JL, Van Den Wymelenberg KG, Hickey RJ.

Microbiome. 2017 Jul 14;5(1):76. doi: 10.1186/s40168-017-0294-2. Review.


The yeast noncoding RNA interaction network.

Panni S, Prakash A, Bateman A, Orchard S.

RNA. 2017 Oct;23(10):1479-1492. doi: 10.1261/rna.060996.117. Epub 2017 Jul 12.


Home-based neurologic music therapy for arm hemiparesis following stroke: results from a pilot, feasibility randomized controlled trial.

Street AJ, Magee WL, Bateman A, Parker M, Odell-Miller H, Fachner J.

Clin Rehabil. 2018 Jan;32(1):18-28. doi: 10.1177/0269215517717060. Epub 2017 Jun 23.


Computerized Cognitive Behavioral Therapy to Treat Emotional Distress After Stroke: A Feasibility Randomized Controlled Trial.

Simblett SK, Yates M, Wagner AP, Watson P, Gracey F, Ring H, Bateman A.

JMIR Ment Health. 2017 May 31;4(2):e16. doi: 10.2196/mental.6022.


British Society of Gastroenterology position statement on serrated polyps in the colon and rectum.

East JE, Atkin WS, Bateman AC, Clark SK, Dolwani S, Ket SN, Leedham SJ, Phull PS, Rutter MD, Shepherd NA, Tomlinson I, Rees CJ.

Gut. 2017 Jul;66(7):1181-1196. doi: 10.1136/gutjnl-2017-314005. Epub 2017 Apr 27. Review.


Gastric foveolar dysplasia: a survey of reporting habits and diagnostic criteria.

Serra S, Ali R, Bateman AC, Dasgupta K, Deshpande V, Driman DK, Gibbons D, Grin A, Hafezi-Bakhtiari S, Sheahan K, Srivastava A, Szentgyorgyi E, Vajpeyi R, Walsh S, Wang LM, Chetty R.

Pathology. 2017 Jun;49(4):391-396. doi: 10.1016/j.pathol.2017.01.007. Epub 2017 Apr 21.


Neurotrophic effects of progranulin in vivo in reversing motor neuron defects caused by over or under expression of TDP-43 or FUS.

Chitramuthu BP, Kay DG, Bateman A, Bennett HP.

PLoS One. 2017 Mar 30;12(3):e0174784. doi: 10.1371/journal.pone.0174784. eCollection 2017.


Conjugal amyotrophic lateral sclerosis: a case report from Scotland.

Fernandes PM, Macleod MR, Bateman A, Abrahams S, Pal S.

BMC Neurol. 2017 Mar 29;17(1):64. doi: 10.1186/s12883-017-0847-9.


Eros is a novel transmembrane protein that controls the phagocyte respiratory burst and is essential for innate immunity.

Thomas DC, Clare S, Sowerby JM, Pardo M, Juss JK, Goulding DA, van der Weyden L, Storisteanu D, Prakash A, Espéli M, Flint S, Lee JC, Hoenderdos K, Kane L, Harcourt K, Mukhopadhyay S, Umrania Y, Antrobus R, Nathan JA, Adams DJ, Bateman A, Choudhary JS, Lyons PA, Condliffe AM, Chilvers ER, Dougan G, Smith KG.

J Exp Med. 2017 Apr 3;214(4):1111-1128. doi: 10.1084/jem.20161382. Epub 2017 Mar 28.


NEOSCOPE: A randomised phase II study of induction chemotherapy followed by oxaliplatin/capecitabine or carboplatin/paclitaxel based pre-operative chemoradiation for resectable oesophageal adenocarcinoma.

Mukherjee S, Hurt CN, Gwynne S, Sebag-Montefiore D, Radhakrishna G, Gollins S, Hawkins M, Grabsch HI, Jones G, Falk S, Sharma R, Bateman A, Roy R, Ray R, Canham J, Griffiths G, Maughan T, Crosby T.

Eur J Cancer. 2017 Mar;74:38-46. doi: 10.1016/j.ejca.2016.11.031. Epub 2017 Feb 8.


Cutaneous phaeohyphomycosis in a hematopoietic stem cell transplant patient caused by Alternaria rosae: First case report.

Liu AW, Bateman AC, Greenbaum A, Garvin K, Clarridge J, Grim J.

Transpl Infect Dis. 2017 Jun;19(3). doi: 10.1111/tid.12698. Epub 2017 May 4.


Primary Clear Cell Microcystic Adenoma of the Sinonasal Cavity: Pathological or Fortuitous Association?

Cooper R, Markham H, Theaker J, Bateman A, Bunyan D, Sommerlad M, Crawford G, Eccles D.

Case Rep Pathol. 2017;2017:9236780. doi: 10.1155/2017/9236780. Epub 2017 Feb 5.


Treating Borderline Personality Disorder With Psychotherapy: Where Do We Go From Here?

Fonagy P, Luyten P, Bateman A.

JAMA Psychiatry. 2017 Apr 1;74(4):316-317. doi: 10.1001/jamapsychiatry.2016.4302. No abstract available.


Increases in IgE, Eosinophils, and Mast Cells Can be Used in Diagnosis and to Predict Relapse of IgG4-Related Disease.

Culver EL, Sadler R, Bateman AC, Makuch M, Cargill T, Ferry B, Aalberse R, Barnes E, Rispens T.

Clin Gastroenterol Hepatol. 2017 Sep;15(9):1444-1452.e6. doi: 10.1016/j.cgh.2017.02.007. Epub 2017 Feb 20.


Structure of the Escherichia coli ProQ RNA-binding protein.

Gonzalez GM, Hardwick SW, Maslen SL, Skehel JM, Holmqvist E, Vogel J, Bateman A, Luisi BF, Broadhurst RW.

RNA. 2017 May;23(5):696-711. doi: 10.1261/rna.060343.116. Epub 2017 Feb 13.


Maintenance of polygenic sex determination in a fluctuating environment: an individual-based model.

Bateman AW, Anholt BR.

J Evol Biol. 2017 May;30(5):915-925. doi: 10.1111/jeb.13054. Epub 2017 Mar 29.


Emotion Recognition and Perspective Taking: A Comparison between Typical and Incarcerated Male Adolescents.

Morosan L, Badoud D, Zaharia A, Brosch T, Eliez S, Bateman A, Heller P, Debbané M.

PLoS One. 2017 Jan 25;12(1):e0170646. doi: 10.1371/journal.pone.0170646. eCollection 2017.


Quantification of BK Virus Standards by Quantitative Real-Time PCR and Droplet Digital PCR Is Confounded by Multiple Virus Populations in the WHO BKV International Standard.

Bateman AC, Greninger AL, Atienza EE, Limaye AP, Jerome KR, Cook L.

Clin Chem. 2017 Mar;63(3):761-769. doi: 10.1373/clinchem.2016.265512. Epub 2017 Jan 18.

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