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Plasma Concentrations of High Molecular Weight Kininogen and Prekallikrein and Venous Thromboembolism Incidence in the General Population.

Folsom AR, Tang W, Basu S, Misialek JR, Couper D, Heckbert SR, Cushman M.

Thromb Haemost. 2019 Feb 19. doi: 10.1055/s-0039-1678737. [Epub ahead of print]


Commentary: Serpiginous choroiditis-so near yet so far.

Basu S.

Indian J Ophthalmol. 2019 Mar;67(3):333-334. doi: 10.4103/ijo.IJO_1686_18. No abstract available.


Association of Primary Care Physician Supply With Population Mortality in the United States, 2005-2015.

Basu S, Berkowitz SA, Phillips RL, Bitton A, Landon BE, Phillips RS.

JAMA Intern Med. 2019 Feb 18. doi: 10.1001/jamainternmed.2018.7624. [Epub ahead of print]


Copy-choice recombination during mitochondrial L-strand synthesis causes DNA deletions.

Persson Ö, Muthukumar Y, Basu S, Jenninger L, Uhler JP, Berglund AK, McFarland R, Taylor RW, Gustafsson CM, Larsson E, Falkenberg M.

Nat Commun. 2019 Feb 15;10(1):759. doi: 10.1038/s41467-019-08673-5.


Personalizing Second-Line Type 2 Diabetes Treatment Selection: Combining Network Meta-analysis, Individualized Risk, and Patient Preferences for Unified Decision Support.

Choi SE, Berkowitz SA, Yudkin JS, Naci H, Basu S.

Med Decis Making. 2019 Feb 15:272989X19829735. doi: 10.1177/0272989X19829735. [Epub ahead of print]


Stable G-quadruplex enabling sequences are selected against by the context-dependent codon bias.

Arachchilage GM, Arachchilage MH, Venkataraman A, Piontkivska H, Basu S.

Gene. 2019 Feb 9. pii: S0378-1119(19)30113-1. doi: 10.1016/j.gene.2019.02.006. [Epub ahead of print]


Molecular characterization of prostate cancer with associated Gleason score using mass spectrometry imaging.

Randall EC, Zadra G, Chetta P, Lopez BGC, Syamala S, Basu SS, Agar JN, Loda M, Tempany CM, Fennessy FM, Agar NYR.

Mol Cancer Res. 2019 Feb 11. pii: molcanres.1057.2018. doi: 10.1158/1541-7786.MCR-18-1057. [Epub ahead of print]


Genome wide analysis of W-box element in Arabidopsis thaliana reveals TGAC motif with genes down regulated by heat and salinity.

Dhatterwal P, Basu S, Mehrotra S, Mehrotra R.

Sci Rep. 2019 Feb 8;9(1):1681. doi: 10.1038/s41598-019-38757-7.


Effect of arabinoxylan and β-glucan stearic acid ester coatings on post-harvest quality of apple (Royal Delicious).

Ali U, Kanwar S, Yadav K, Basu S, Mazumder K.

Carbohydr Polym. 2019 Apr 1;209:338-349. doi: 10.1016/j.carbpol.2019.01.002. Epub 2019 Jan 2.


Supramolecular self-assembly of triazine-based small molecules: targeting the endoplasmic reticulum in cancer cells.

Ghosh C, Nandi A, Basu S.

Nanoscale. 2019 Feb 14;11(7):3326-3335. doi: 10.1039/c8nr08682f.


A novel octaray multielectrode catheter for high-resolution atrial mapping: Electrogram characterization and utility for mapping ablation gaps.

Sroubek J, Rottmann M, Barkagan M, Leshem E, Shapira-Daniels A, Brem E, Fuentes-Ortega C, Malinaric J, Basu S, Bar-Tal M, Anter E.

J Cardiovasc Electrophysiol. 2019 Feb 5. doi: 10.1111/jce.13867. [Epub ahead of print]


Multicolumn Spinal Cord Stimulation for Predominant Back Pain in Failed Back Surgery Syndrome Patients: A Multicenter Randomized Controlled Trial.

Rigoard P, Basu S, Desai M, Taylor R, Annemans L, Tan Y, Johnson MJ, Van den Abeele C, North R; PROMISE Study Group.

Pain. 2019 Feb 1. doi: 10.1097/j.pain.0000000000001510. [Epub ahead of print]


Third Trimester Cerebellar Metabolite Concentrations are Decreased in Very Premature Infants with Structural Brain Injury.

Basu SK, Pradhan S, Kapse K, McCarter R, Murnick J, Chang T, Limperopoulos C.

Sci Rep. 2019 Feb 4;9(1):1212. doi: 10.1038/s41598-018-37203-4.


Buparlisib in Patients With Recurrent Glioblastoma Harboring Phosphatidylinositol 3-Kinase Pathway Activation: An Open-Label, Multicenter, Multi-Arm, Phase II Trial.

Wen PY, Touat M, Alexander BM, Mellinghoff IK, Ramkissoon S, McCluskey CS, Pelton K, Haidar S, Basu SS, Gaffey SC, Brown LE, Martinez-Ledesma JE, Wu S, Kim J, Wei W, Park MA, Huse JT, Kuhn JG, Rinne ML, Colman H, Agar NYR, Omuro AM, DeAngelis LM, Gilbert MR, de Groot JF, Cloughesy TF, Chi AS, Roberts TM, Zhao JJ, Lee EQ, Nayak L, Heath JR, Horky LL, Batchelor TT, Beroukhim R, Chang SM, Ligon AH, Dunn IF, Koul D, Young GS, Prados MD, Reardon DA, Yung WKA, Ligon KL.

J Clin Oncol. 2019 Feb 4:JCO1801207. doi: 10.1200/JCO.18.01207. [Epub ahead of print]


Health Care Spending Slowed After Rhode Island Applied Affordability Standards To Commercial Insurers.

Baum A, Song Z, Landon BE, Phillips RS, Bitton A, Basu S.

Health Aff (Millwood). 2019 Feb;38(2):237-245. doi: 10.1377/hlthaff.2018.05164.


Controlling self-assembly and buckling in nano fluid droplets through vapour mediated interaction of adjacent droplets.

Hegde O, Kabi P, Agarwal S, Basu S.

J Colloid Interface Sci. 2019 Apr 1;541:348-355. doi: 10.1016/j.jcis.2019.01.106. Epub 2019 Jan 25.


Colloidal Gels with Tunable Mechanomorphology Regulate Endothelial Morphogenesis.

Nair SK, Basu S, Sen B, Lin MH, Kumar AN, Yuan Y, Cullen PJ, Sarkar D.

Sci Rep. 2019 Jan 31;9(1):1072. doi: 10.1038/s41598-018-37788-w.


Estimating the long-run relationship between state cigarette taxes and county life expectancy.

Baum A, Aguilar-Gomez S, Lightwood J, Bruzelius E, Glantz SA, Basu S.

Tob Control. 2019 Jan 31. pii: tobaccocontrol-2018-054686. doi: 10.1136/tobaccocontrol-2018-054686. [Epub ahead of print]


Multivalent Role of Human TFIID in Recruiting Elongation Components at the Promoter-Proximal Region for Transcriptional Control.

Yadav D, Ghosh K, Basu S, Roeder RG, Biswas D.

Cell Rep. 2019 Jan 29;26(5):1303-1317.e7. doi: 10.1016/j.celrep.2019.01.012.


Structural Perspective on Revealing and Altering Molecular Functions of Genetic Variants Linked with Diseases.

Peng Y, Alexov E, Basu S.

Int J Mol Sci. 2019 Jan 28;20(3). pii: E548. doi: 10.3390/ijms20030548. Review.


Molecular characterization of NDM-1-producing Klebsiella pneumoniae ST29, ST347, ST1224, and ST2558 causing sepsis in neonates in a tertiary care hospital of North-East India.

Mukherjee S, Bhattacharjee A, Naha S, Majumdar T, Debbarma SK, Kaur H, Dutta S, Basu S.

Infect Genet Evol. 2019 Jan 21;69:166-175. doi: 10.1016/j.meegid.2019.01.024. [Epub ahead of print]


Evaluating strategies for control of tuberculosis in prisons and prevention of spillover into communities: An observational and modeling study from Brazil.

Mabud TS, de Lourdes Delgado Alves M, Ko AI, Basu S, Walter KS, Cohen T, Mathema B, Colijn C, Lemos E, Croda J, Andrews JR.

PLoS Med. 2019 Jan 24;16(1):e1002737. doi: 10.1371/journal.pmed.1002737. eCollection 2019 Jan.


Effects of acute dietary nitrate supplementation on aortic blood pressures and pulse wave characteristics in post-menopausal women.

Kim DJ, Roe CA, Somani YB, Moore DJ, Barrett MA, Flanagan M, Kim-Shapiro DB, Basu S, Muller MD, Proctor DN.

Nitric Oxide. 2019 Jan 19;85:10-16. doi: 10.1016/j.niox.2019.01.008. [Epub ahead of print]


Laparoscopic repair of type III/IV giant para-oesophageal herniae with biological prosthesis: a single centre experience.

Shrestha AK, Joshi M, DeBono L, Naeem K, Basu S.

Hernia. 2019 Jan 19. doi: 10.1007/s10029-019-01888-x. [Epub ahead of print]


A large-scale exome array analysis of venous thromboembolism.

Lindström S, Brody JA, Turman C, Germain M, Bartz TM, Smith EN, Chen MH, Puurunen M, Chasman D, Hassler J, Pankratz N, Basu S, Guan W, Gyorgy B, Ibrahim M, Empana JP, Olaso R, Jackson R, Braekkan SK, McKnight B, Deleuze JF, O'Donnell CJ, Jouven X, Frazer KA, Psaty BM, Wiggins KL, Taylor K, Reiner AP, Heckbert SR, Kooperberg C, Ridker P, Hansen JB, Tang W, Johnson AD, Morange PE, Trégouët DA, Kraft P, Smith NL, Kabrhel C; INVENT Consortium.

Genet Epidemiol. 2019 Jan 19. doi: 10.1002/gepi.22187. [Epub ahead of print]


Description and analysis of patients and outcomes following third-time heart transplantation: An analysis of the United Network for Organ Sharing database from 1985 to 2017.

Bhalla S, Dubey GK, Basu S, Kanangat S, Dobrescu C, Nath DS.

Clin Transplant. 2019 Jan 19:e13482. doi: 10.1111/ctr.13482. [Epub ahead of print]


Automated data collection and real-time data analysis suite for serial synchrotron crystallography.

Basu S, Kaminski JW, Panepucci E, Huang CY, Warshamanage R, Wang M, Wojdyla JA.

J Synchrotron Radiat. 2019 Jan 1;26(Pt 1):244-252. doi: 10.1107/S1600577518016570. Epub 2019 Jan 1.


Cytogenetic and micronuclei study of human papillomavirus-related oral squamous cell carcinoma.

Pal P, Raychowdhury R, Basu S, Gure PK, Das S, Halder A.

J Oral Maxillofac Pathol. 2018 Sep-Dec;22(3):335-340. doi: 10.4103/jomfp.JOMFP_269_17.


Mature IgDlow/- B cells maintain tolerance by promoting regulatory T cell homeostasis.

Ray A, Khalil MI, Pulakanti KL, Burns RT, Gurski CJ, Basu S, Wang D, Rao S, Dittel BN.

Nat Commun. 2019 Jan 14;10(1):190. doi: 10.1038/s41467-018-08122-9.


Induction of Apoptosis in Metastatic Breast Cancer Cells: XV. Downregulation of DNA Polymerase-α - Helicase Complex (Replisomes) and Glyco-Genes.

Basu SC, Boyle P, Ma R, Agarwal A, Basu M, Moskal JR, Banerjee S, Tuteja N.

Adv Exp Med Biol. 2018;1112:199-221. doi: 10.1007/978-981-13-3065-0_15.


Comparison of immune infiltrates in melanoma and pancreatic cancer highlights VISTA as a potential target in pancreatic cancer.

Blando J, Sharma A, Higa MG, Zhao H, Vence L, Yadav SS, Kim J, Sepulveda AM, Sharp M, Maitra A, Wargo J, Tetzlaff M, Broaddus R, Katz MHG, Varadhachary GR, Overman M, Wang H, Yee C, Bernatchez C, Iacobuzio-Donahue C, Basu S, Allison JP, Sharma P.

Proc Natl Acad Sci U S A. 2019 Jan 29;116(5):1692-1697. doi: 10.1073/pnas.1811067116. Epub 2019 Jan 11.


Support for Resettling Refugees: The Role of Fixed Versus Growth Mind-Sets.

Madan S, Basu S, Rattan A, Savani K.

Psychol Sci. 2019 Feb;30(2):238-249. doi: 10.1177/0956797618813561. Epub 2019 Jan 11.


Epithelial cell functionality on electroconductive Fe/Sr co-doped biphasic calcium phosphate.

Basu S, Ghosh A, Barui A, Basu B.

J Biomater Appl. 2019 Jan 10:885328218821549. doi: 10.1177/0885328218821549. [Epub ahead of print]


A study of the role of vision in the foraging behaviour of the pyrrhocorid bug Antilochus conquebertii (Insecta; Hemiptera; Pyrrhocoridae).

Mishra M, Chakraborty I, Basu S.

Invert Neurosci. 2019 Jan 2;19(1):2. doi: 10.1007/s10158-018-0222-6.


Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy.

Arbel H, Basu S, Fisher WW, Hammonds AS, Wan KH, Park S, Weiszmann R, Booth BW, Keranen SV, Henriquez C, Shams Solari O, Bickel PJ, Biggin MD, Celniker SE, Brown JB.

Proc Natl Acad Sci U S A. 2019 Jan 15;116(3):900-908. doi: 10.1073/pnas.1808833115. Epub 2018 Dec 31.


Polycystic Ovarian Condition May Be a Risk Factor for Ovarian Tumor Development in the Laying Hen Model of Spontaneous Ovarian Cancer.

Lee HJ, Bahr JM, Bitterman P, Basu S, Sharma S, Abramowicz JS, Barua A.

J Immunol Res. 2018 Nov 25;2018:2590910. doi: 10.1155/2018/2590910. eCollection 2018.


Testosterone augments FSH signaling by upregulating the expression and activity of FSH-Receptor in Pubertal Primate Sertoli cells.

Bhattacharya I, Basu S, Pradhan BS, Sarkar H, Nagarajan P, Majumdar SS.

Mol Cell Endocrinol. 2019 Feb 15;482:70-80. doi: 10.1016/j.mce.2018.12.012. Epub 2018 Dec 21.


Structure of a human intramembrane ceramidase explains enzymatic dysfunction found in leukodystrophy.

Vasiliauskaité-Brooks I, Healey RD, Rochaix P, Saint-Paul J, Sounier R, Grison C, Waltrich-Augusto T, Fortier M, Hoh F, Saied EM, Arenz C, Basu S, Leyrat C, Granier S.

Nat Commun. 2018 Dec 21;9(1):5437. doi: 10.1038/s41467-018-07864-w.


Global, Regional, and Country-Specific Lifetime Risks of Stroke, 1990 and 2016.

GBD 2016 Lifetime Risk of Stroke Collaborators, Feigin VL, Nguyen G, Cercy K, Johnson CO, Alam T, Parmar PG, Abajobir AA, Abate KH, Abd-Allah F, Abejie AN, Abyu GY, Ademi Z, Agarwal G, Ahmed MB, Akinyemi RO, Al-Raddadi R, Aminde LN, Amlie-Lefond C, Ansari H, Asayesh H, Asgedom SW, Atey TM, Ayele HT, Banach M, Banerjee A, Barac A, Barker-Collo SL, Bärnighausen T, Barregard L, Basu S, Bedi N, Behzadifar M, Béjot Y, Bennett DA, Bensenor IM, Berhe DF, Boneya DJ, Brainin M, Campos-Nonato IR, Caso V, Castañeda-Orjuela CA, Rivas JC, Catalá-López F, Christensen H, Criqui MH, Damasceno A, Dandona L, Dandona R, Davletov K, de Courten B, deVeber G, Dokova K, Edessa D, Endres M, Faraon EJA, Farvid MS, Fischer F, Foreman K, Forouzanfar MH, Gall SL, Gebrehiwot TT, Geleijnse JM, Gillum RF, Giroud M, Goulart AC, Gupta R, Gupta R, Hachinski V, Hamadeh RR, Hankey GJ, Hareri HA, Havmoeller R, Hay SI, Hegazy MI, Hibstu DT, James SL, Jeemon P, John D, Jonas JB, Jóźwiak J, Kalani R, Kandel A, Kasaeian A, Kengne AP, Khader YS, Khan AR, Khang YH, Khubchandani J, Kim D, Kim YJ, Kivimaki M, Kokubo Y, Kolte D, Kopec JA, Kosen S, Kravchenko M, Krishnamurthi R, Kumar GA, Lafranconi A, Lavados PM, Legesse Y, Li Y, Liang X, Lo WD, Lorkowski S, Lotufo PA, Loy CT, Mackay MT, Abd El Razek HM, Mahdavi M, Majeed A, Malekzadeh R, Malta DC, Mamun AA, Mantovani LG, Martins SCO, Mate KK, Mazidi M, Mehata S, Meier T, Melaku YA, Mendoza W, Mensah GA, Meretoja A, Mezgebe HB, Miazgowski T, Miller TR, Ibrahim NM, Mohammed S, Mokdad AH, Moosazadeh M, Moran AE, Musa KI, Negoi RI, Nguyen M, Nguyen QL, Nguyen TH, Tran TT, Nguyen TT, Anggraini Ningrum DN, Norrving B, Noubiap JJ, O’Donnell MJ, Olagunju AT, Onuma OK, Owolabi MO, Parsaeian M, Patton GC, Piradov M, Pletcher MA, Pourmalek F, Prakash V, Qorbani M, Rahman M, Rahman MA, Rai RK, Ranta A, Rawaf D, Rawaf S, Renzaho AM, Robinson SR, Sahathevan R, Sahebkar A, Salomon JA, Santalucia P, Santos IS, Sartorius B, Schutte AE, Sepanlou SG, Shafieesabet A, Shaikh MA, Shamsizadeh M, Sheth KN, Sisay M, Shin MJ, Shiue I, Silva DAS, Sobngwi E, Soljak M, Sorensen RJD, Sposato LA, Stranges S, Suliankatchi RA, Tabarés-Seisdedos R, Tanne D, Nguyen CT, Thakur JS, Thrift AG, Tirschwell DL, Topor-Madry R, Tran BX, Nguyen LT, Truelsen T, Tsilimparis N, Tyrovolas S, Ukwaja KN, Uthman OA, Varakin Y, Vasankari T, Venketasubramanian N, Vlassov VV, Wang W, Werdecker A, Wolfe CDA, Xu G, Yano Y, Yonemoto N, Yu C, Zaidi Z, El Sayed Zaki M, Zhou M, Ziaeian B, Zipkin B, Vos T, Naghavi M, Murray CJL, Roth GA.

N Engl J Med. 2018 Dec 20;379(25):2429-2437. doi: 10.1056/NEJMoa1804492.


Limbal ischemia: Reliability of clinical assessment and implications in the management of ocular burns.

Kam KW, Patel CN, Nikpoor N, Yu M, Basu S.

Indian J Ophthalmol. 2019 Jan;67(1):32-36. doi: 10.4103/ijo.IJO_945_18.


Amphiphilic carbon dots derived by cationic surfactant for selective and sensitive detection of metal ions.

Kaur N, Mehta A, Mishra A, Chaudhary S, Rawat M, Basu S.

Mater Sci Eng C Mater Biol Appl. 2019 Feb 1;95:72-77. doi: 10.1016/j.msec.2018.10.058. Epub 2018 Oct 22.


X-ray Emission Spectroscopy at X-ray Free Electron Lasers: Limits to Observation of the Classical Spectroscopic Response for Electronic Structure Analysis.

Jensen SC, Sullivan B, Hartzler DA, Aguilar JM, Awel S, Bajt S, Basu S, Bean R, Chapman HN, Conrad C, Frank M, Fromme R, Martin-Garcia JM, Grant TD, Heymann M, Hunter MS, Ketawala G, Kirian RA, Knoska J, Kupitz C, Li X, Liang M, Lisova S, Mariani V, Mazalova V, Messerschmidt M, Moran M, Nelson G, Oberthür D, Schaffer A, Sierra RG, Vaughn N, Weierstall U, Wiedorn MO, Xavier PL, Yang JH, Yefanov O, Zatsepin NA, Aquila A, Fromme P, Boutet S, Seidler GT, Pushkar Y.

J Phys Chem Lett. 2019 Feb 7;10(3):441-446. doi: 10.1021/acs.jpclett.8b03595. Epub 2019 Jan 16.


Tumour treating fields in a combinational therapeutic approach.

Branter J, Basu S, Smith S.

Oncotarget. 2018 Nov 27;9(93):36631-36644. doi: 10.18632/oncotarget.26344. eCollection 2018 Nov 27. Review.



Dave VP, Pathengay A, Sharma S, Naveen N, Basu S, Pappuru RR, Das T.

Am J Ophthalmol. 2019 Mar;199:258. doi: 10.1016/j.ajo.2018.10.024. Epub 2018 Dec 15. No abstract available.


VarGenius executes cohort-level DNA-seq variant calling and annotation and allows to manage the resulting data through a PostgreSQL database.

Musacchia F, Ciolfi A, Mutarelli M, Bruselles A, Castello R, Pinelli M, Basu S, Banfi S, Casari G, Tartaglia M, Nigro V; TUDP.

BMC Bioinformatics. 2018 Dec 12;19(1):477. doi: 10.1186/s12859-018-2532-4.


Utilizing serum bicarbonate instead of venous pH to transition from intravenous to subcutaneous insulin shortens the duration of insulin infusion in pediatric diabetic ketoacidosis.

Gauntt J, Vaidyanathan P, Basu S.

J Pediatr Endocrinol Metab. 2018 Dec 7. pii: /j/jpem.ahead-of-print/jpem-2018-0394/jpem-2018-0394.xml. doi: 10.1515/jpem-2018-0394. [Epub ahead of print]


Implications of scaling up cardiovascular disease treatment in South Africa: a microsimulation and cost-effectiveness analysis.

Basu S, Wagner RG, Sewpaul R, Reddy P, Davies J.

Lancet Glob Health. 2019 Feb;7(2):e270-e280. doi: 10.1016/S2214-109X(18)30450-9. Epub 2018 Dec 6.


Outcomes Analysis of Children Diagnosed With Hemophagocytic Lymphohistiocytosis in the PICU.

Gregory J, Greenberg J, Basu S.

Pediatr Crit Care Med. 2018 Dec 4. doi: 10.1097/PCC.0000000000001827. [Epub ahead of print]


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