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Items: 46

1.

Potentially important miRNAs in enteropathy-associated T-cell lymphoma pathogenesis: A pilot study.

Clarke L, Adduri RS, Smyth P, Quinn F, Jeffers M, Dunne B, O'Leary J, McKiernan S, Vandenberghe E, Pyne S, Bashyam MD, Sheils O, Flavin R.

Leuk Res Rep. 2018 Oct 16;10:52-54. doi: 10.1016/j.lrr.2018.10.002. eCollection 2018. No abstract available.

2.

The Yin and Yang of cancer genes.

Bashyam MD, Animireddy S, Bala P, Naz A, George SA.

Gene. 2019 Jul 1;704:121-133. doi: 10.1016/j.gene.2019.04.025. Epub 2019 Apr 11. Review.

PMID:
30980945
3.

XPNPEP3 is a novel transcriptional target of canonical Wnt/β-catenin signaling.

Kumar R, Kotapalli V, Naz A, Gowrishankar S, Rao S, Pollack JR, Bashyam MD.

Genes Chromosomes Cancer. 2018 Jun;57(6):304-310. doi: 10.1002/gcc.22531. Epub 2018 Feb 22.

PMID:
29383790
4.

Multiple oncogenic roles of nuclear beta-catenin.

Kumar R, Bashyam MD.

J Biosci. 2017 Dec;42(4):695-707. Review.

PMID:
29229887
5.

Ca2+/nuclear factor of activated T cells signaling is enriched in early-onset rectal tumors devoid of canonical Wnt activation.

Kumar R, Raman R, Kotapalli V, Gowrishankar S, Pyne S, Pollack JR, Bashyam MD.

J Mol Med (Berl). 2018 Feb;96(2):135-146. doi: 10.1007/s00109-017-1607-4. Epub 2017 Nov 9.

PMID:
29124284
6.

A novel large deletion that encompasses EDA and the downstream gene AWAT2 causes X-linked hypohidrotic/anhidrotic ectodermal dysplasia.

Chaudhary AK, Sankar VH, Bashyam MD.

J Dermatol Sci. 2016 Oct;84(1):105-107. doi: 10.1016/j.jdermsci.2016.06.012. Epub 2016 Jun 28. No abstract available.

PMID:
27443954
7.

The novel EDAR p.L397H missense mutation causes autosomal dominant hypohidrotic ectodermal dysplasia.

Chaudhary AK, Mohapatra R, Nagarajaram HA, Ranganath P, Dalal A, Dutta A, Danda S, Girisha KM, Bashyam MD.

J Eur Acad Dermatol Venereol. 2017 Jan;31(1):e17-e20. doi: 10.1111/jdv.13587. Epub 2016 May 11. No abstract available.

PMID:
27168349
8.

A novel EDARADD 5'-splice site mutation resulting in activation of two alternate cryptic 5'-splice sites causes autosomal recessive Hypohidrotic Ectodermal Dysplasia.

Chaudhary AK, Girisha KM, Bashyam MD.

Am J Med Genet A. 2016 Jun;170(6):1639-41. doi: 10.1002/ajmg.a.37607. Epub 2016 Mar 15. No abstract available.

PMID:
26991760
9.

Fucoidan from Turbinaria conoides: a multifaceted 'deliverable' to combat pancreatic cancer progression.

Delma CR, Somasundaram ST, Srinivasan GP, Khursheed M, Bashyam MD, Aravindan N.

Int J Biol Macromol. 2015 Mar;74:447-57. doi: 10.1016/j.ijbiomac.2014.12.031. Epub 2014 Dec 23. Erratum in: Int J Biol Macromol. 2015 May;76:330.

PMID:
25541359
10.

TP53 Pro72 allele is enriched in oral tongue cancer and frequently mutated in esophageal cancer in India.

Adduri RS, Katamoni R, Pandilla R, Madana SN, Paripati AK, Kotapalli V, Bashyam MD.

PLoS One. 2014 Dec 1;9(12):e114002. doi: 10.1371/journal.pone.0114002. eCollection 2014.

11.

Evidence for presence of mismatch repair gene expression positive Lynch syndrome cases in India.

Bashyam MD, Kotapalli V, Raman R, Chaudhary AK, Yadav BK, Gowrishankar S, Uppin SG, Kongara R, Sastry RA, Vamsy M, Patnaik S, Rao S, Dsouza S, Desai D, Tester A.

Mol Carcinog. 2015 Dec;54(12):1807-14. doi: 10.1002/mc.22244. Epub 2014 Nov 24.

PMID:
25420488
12.

P53 nuclear stabilization is associated with FHIT loss and younger age of onset in squamous cell carcinoma of oral tongue.

Adduri R Sr, Kotapalli V, Gupta NA, Gowrishankar S, Srinivasulu M, Ali MM, Rao S, Uppin SG, Nayak UK, Dhagam S, Chigurupati MV, Bashyam MD.

BMC Clin Pathol. 2014 Aug 9;14:37. doi: 10.1186/1472-6890-14-37. eCollection 2014.

13.

Apico-basal polarity complex and cancer.

Khursheed M, Bashyam MD.

J Biosci. 2014 Mar;39(1):145-55. Review.

PMID:
24499799
14.

Molecular analyses of novel ASAH1 mutations causing Farber lipogranulomatosis: analyses of exonic splicing enhancer inactivating mutation.

Bashyam MD, Chaudhary AK, Kiran M, Reddy V, Nagarajaram HA, Dalal A, Bashyam L, Suri D, Gupta A, Gupta N, Kabra M, Puri RD, RamaDevi R, Kapoor S, Danda S.

Clin Genet. 2014 Dec;86(6):530-8. doi: 10.1111/cge.12316. Epub 2013 Dec 20.

PMID:
24355074
15.

Splice, insertion-deletion and nonsense mutations that perturb the phenylalanine hydroxylase transcript cause phenylketonuria in India.

Bashyam MD, Chaudhary AK, Kiran M, Nagarajaram HA, Devi RR, Ranganath P, Dalal A, Bashyam L, Gupta N, Kabra M, Muranjan M, Puri RD, Verma IC, Nampoothiri S, Kadandale JS.

J Cell Biochem. 2014 Mar;115(3):566-74. doi: 10.1002/jcb.24692.

PMID:
24130151
16.

Distinct genetic aberrations in oesophageal adeno and squamous carcinoma.

Pandilla R, Kotapalli V, Gowrishankar S, Chigurupati M, Patnaik S, Uppin S, Rao S, Kalidindi N, Regulagadda S, Sundaram C, Srinivasulu M, Vasala A, Bashyam MD.

Eur J Clin Invest. 2013 Dec;43(12):1233-9. doi: 10.1111/eci.12163. Epub 2013 Sep 17.

PMID:
24102414
17.

ARID1B, a member of the human SWI/SNF chromatin remodeling complex, exhibits tumour-suppressor activities in pancreatic cancer cell lines.

Khursheed M, Kolla JN, Kotapalli V, Gupta N, Gowrishankar S, Uppin SG, Sastry RA, Koganti S, Sundaram C, Pollack JR, Bashyam MD.

Br J Cancer. 2013 May 28;108(10):2056-62. doi: 10.1038/bjc.2013.200. Epub 2013 May 9.

18.

PNUTS functions as a proto-oncogene by sequestering PTEN.

Kavela S, Shinde SR, Ratheesh R, Viswakalyan K, Bashyam MD, Gowrishankar S, Vamsy M, Pattnaik S, Rao S, Sastry RA, Srinivasulu M, Chen J, Maddika S.

Cancer Res. 2013 Jan 1;73(1):205-14. doi: 10.1158/0008-5472.CAN-12-1394. Epub 2012 Nov 1.

20.

Molecular genetic analysis of MSUD from India reveals mutations causing altered protein truncation affecting the C-termini of E1α and E1β.

Bashyam MD, Chaudhary AK, Sinha M, Nagarajaram HA, Devi AR, Bashyam L, Reddy EC, Dalal A.

J Cell Biochem. 2012 Oct;113(10):3122-32. doi: 10.1002/jcb.24189.

PMID:
22593002
21.

Convergent structural alterations define SWItch/Sucrose NonFermentable (SWI/SNF) chromatin remodeler as a central tumor suppressive complex in pancreatic cancer.

Shain AH, Giacomini CP, Matsukuma K, Karikari CA, Bashyam MD, Hidalgo M, Maitra A, Pollack JR.

Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):E252-9. doi: 10.1073/pnas.1114817109. Epub 2012 Jan 10.

22.

A founder ectodysplasin A receptor (EDAR) mutation results in a high frequency of the autosomal recessive form of hypohidrotic ectodermal dysplasia in India.

Bashyam MD, Chaudhary AK, Reddy EC, Reddy V, Acharya V, Nagarajaram HA, Devi AR, Bashyam L, Dalal AB, Gupta N, Kabra M, Agarwal M, Phadke SR, Tainwala R, Kumar R, Hariharan SV.

Br J Dermatol. 2012 Apr;166(4):819-29. doi: 10.1111/j.1365-2133.2011.10707.x. Epub 2012 Mar 5.

PMID:
22032522
23.

A low prevalence of MYH7/MYBPC3 mutations among familial hypertrophic cardiomyopathy patients in India.

Bashyam MD, Purushotham G, Chaudhary AK, Rao KM, Acharya V, Mohammad TA, Nagarajaram HA, Hariram V, Narasimhan C.

Mol Cell Biochem. 2012 Jan;360(1-2):373-82. doi: 10.1007/s11010-011-1077-x. Epub 2011 Sep 29.

PMID:
21959974
24.

SMURF1 amplification promotes invasiveness in pancreatic cancer.

Kwei KA, Shain AH, Bair R, Montgomery K, Karikari CA, van de Rijn M, Hidalgo M, Maitra A, Bashyam MD, Pollack JR.

PLoS One. 2011;6(8):e23924. doi: 10.1371/journal.pone.0023924. Epub 2011 Aug 22.

25.

Hormonal regulation of gluconeogenic gene transcription in the liver.

Yabaluri N, Bashyam MD.

J Biosci. 2010 Sep;35(3):473-84. Review.

PMID:
20826956
26.

The MYH7 p.R787H mutation causes hypertrophic cardiomyopathy in two unrelated families.

Purushotham G, Madhumohan K, Anwaruddin M, Nagarajaram H, Hariram V, Narasimhan C, Bashyam MD.

Exp Clin Cardiol. 2010 Spring;15(1):e1-4.

27.

Phenylalanine hydroxylase gene mutations in phenylketonuria patients from India: identification of novel mutations that affect PAH RNA.

Bashyam MD, Chaudhary AK, Reddy EC, Devi AR, Savithri GR, Ratheesh R, Bashyam L, Mahesh E, Sen D, Puri R, Verma IC, Nampoothiri S, Vaidyanathan S, Chandrashekar MD, Kantheti P.

Mol Genet Metab. 2010 May;100(1):96-9. doi: 10.1016/j.ymgme.2010.01.016. Epub 2010 Feb 2. Erratum in: Mol Genet Metab. 2010 Aug;100(4):390. Verma, Inder C [corrected to Verma, Ishwar C].

PMID:
20188615
28.

A novel homozygous point mutation at codon 82 (HBB:c.247A > T) in the beta-globin gene leads to thalassemia major.

Angalena R, Prabitha KN, Chaudhary AK, Bashyam MD, Jain S, Dalal AB.

Int J Lab Hematol. 2010 Oct;32(5):548-9. doi: 10.1111/j.1751-553X.2009.01217.x. Epub 2010 Feb 2. No abstract available.

PMID:
20136848
29.

Nonsense-mediated decay: linking a basic cellular process to human disease.

Bashyam MD.

Expert Rev Mol Diagn. 2009 May;9(4):299-303. doi: 10.1586/erm.09.18. No abstract available.

PMID:
19435450
30.

Octamer and heat shock elements regulate transcription from the AcMNPV polyhedrin gene promoter.

Kumar MS, Ramachandran A, Hasnain SE, Bashyam MD.

Arch Virol. 2009;154(3):445-56. doi: 10.1007/s00705-009-0324-x. Epub 2009 Feb 17.

PMID:
19221693
31.

Studies on nonsense mediated decay reveal novel therapeutic options for genetic diseases.

Bashyam MD.

Recent Pat DNA Gene Seq. 2009;3(1):7-15. Review.

PMID:
19149733
32.

Genomic profiling identifies GATA6 as a candidate oncogene amplified in pancreatobiliary cancer.

Kwei KA, Bashyam MD, Kao J, Ratheesh R, Reddy EC, Kim YH, Montgomery K, Giacomini CP, Choi YL, Chatterjee S, Karikari CA, Salari K, Wang P, Hernandez-Boussard T, Swarnalata G, van de Rijn M, Maitra A, Pollack JR.

PLoS Genet. 2008 May 23;4(5):e1000081. doi: 10.1371/journal.pgen.1000081.

33.

Molecular genetic analysis of patients from India with hypohidrotic ectodermal dysplasia reveals novel mutations in the EDA and EDAR genes.

RamaDevi AR, Reddy EC, Ranjan S, Bashyam MD.

Br J Dermatol. 2008 Jan;158(1):163-7. Epub 2007 Oct 26. No abstract available.

PMID:
17970812
34.
35.

Array-based comparative genomic hybridization identifies localized DNA amplifications and homozygous deletions in pancreatic cancer.

Bashyam MD, Bair R, Kim YH, Wang P, Hernandez-Boussard T, Karikari CA, Tibshirani R, Maitra A, Pollack JR.

Neoplasia. 2005 Jun;7(6):556-62.

36.

The extracytoplasmic function sigma factors: role in bacterial pathogenesis.

Bashyam MD, Hasnain SE.

Infect Genet Evol. 2004 Dec;4(4):301-8. Review.

PMID:
15374527
37.

Molecular genetic analyses of beta-thalassemia in South India reveals rare mutations in the beta-globin gene.

Bashyam MD, Bashyam L, Savithri GR, Gopikrishna M, Sangal V, Devi AR.

J Hum Genet. 2004;49(8):408-13. Epub 2004 Jul 24.

PMID:
15278762
38.

The homologous region sequence (hr1) of Autographa californica multinucleocapsid polyhedrosis virus can enhance transcription from non-baculoviral promoters in mammalian cells.

Viswanathan P, Venkaiah B, Kumar MS, Rasheedi S, Vrati S, Bashyam MD, Hasnain SE.

J Biol Chem. 2003 Dec 26;278(52):52564-71. Epub 2003 Oct 21.

39.

The human genome sequence: impact on health care.

Bashyam MD, Hasnain SE.

Indian J Med Res. 2003 Feb;117:43-65. Review.

PMID:
12931839
40.

Molecular genetics of familial hypertrophic cardiomyopathy (FHC).

Bashyam MD, Savithri GR, Kumar MS, Narasimhan C, Nallari P.

J Hum Genet. 2003;48(2):55-64. Review.

PMID:
12601548
41.
42.

Novel Sp family-like transcription factors are present in adult insect cells and are involved in transcription from the polyhedrin gene initiator promoter.

Ramachandran A, Jain A, Arora P, Bashyam MD, Chatterjee U, Ghosh S, Parnaik VK, Hasnain SE.

J Biol Chem. 2001 Jun 29;276(26):23440-9. Epub 2001 Apr 6.

43.

Identification and analysis of "extended -10" promoters from mycobacteria.

Bashyam MD, Tyagi AK.

J Bacteriol. 1998 May;180(9):2568-73.

44.

A study of mycobacterial transcriptional apparatus: identification of novel features in promoter elements.

Bashyam MD, Kaushal D, Dasgupta SK, Tyagi AK.

J Bacteriol. 1996 Aug;178(16):4847-53.

45.

An efficient and high-yielding method for isolation of RNA from mycobacteria.

Bashyam MD, Tyagi A.

Biotechniques. 1994 Nov;17(5):834-6. No abstract available.

PMID:
7530978
46.

Cloning and assessment of mycobacterial promoters by using a plasmid shuttle vector.

Das Gupta SK, Bashyam MD, Tyagi AK.

J Bacteriol. 1993 Aug;175(16):5186-92.

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