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Application of co-composted farm manure and biochar increased the wheat growth and decreased cadmium accumulation in plants under different water regimes.

Bashir A, Rizwan M, Zia Ur Rehman M, Zubair M, Riaz M, Qayyum MF, Alharby HF, Bamagoos AA, Ali S.

Chemosphere. 2020 Jan 3;246:125809. doi: 10.1016/j.chemosphere.2019.125809. [Epub ahead of print]


Mobility of charge carriers in self-assembled monolayers.

Fu Z, Ladnorg T, Gliemann H, Welle A, Bashir A, Rohwerder M, Zhang Q, Schüpbach B, Terfort A, Wöll C.

Beilstein J Nanotechnol. 2019 Dec 11;10:2449-2458. doi: 10.3762/bjnano.10.235. eCollection 2019.


Interrogating the Whole-Genome Shotgun Sequence of Escherichia coli Sequence Type 127 Strain 1538RHQ, Which Harbors Virulent Antigenic Factors, Isolated from a Mastitic Cow.

Bashir A, Zunita Z, Jesse FFA, Ramanoon SZ, Mohd-Azmi ML.

Microbiol Resour Announc. 2019 Nov 27;8(48). pii: e01057-19. doi: 10.1128/MRA.01057-19.


Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis.

Oliveira PH, Ribis JW, Garrett EM, Trzilova D, Kim A, Sekulovic O, Mead EA, Pak T, Zhu S, Deikus G, Touchon M, Lewis-Sandari M, Beckford C, Zeitouni NE, Altman DR, Webster E, Oussenko I, Bunyavanich S, Aggarwal AK, Bashir A, Patel G, Wallach F, Hamula C, Huprikar S, Schadt EE, Sebra R, van Bakel H, Kasarskis A, Tamayo R, Shen A, Fang G.

Nat Microbiol. 2020 Jan;5(1):166-180. doi: 10.1038/s41564-019-0613-4. Epub 2019 Nov 25.


Celiac Disease in a 16-Month-Old Child Presenting as Motor Regression.

Bashir A, Mousattat Y, Lawson A, Patel P.

ACG Case Rep J. 2019 Aug 27;6(8):e00192. doi: 10.14309/crj.0000000000000192. eCollection 2019 Aug.


Increased severity of the CHIMERA model induces acute vascular injury, sub-acute deficits in memory recall, and chronic white matter gliosis.

Bashir A, Abebe ZA, McInnes KA, Button EB, Tatarnikov I, Cheng WH, Haber M, Wilkinson A, Barron C, Diaz-Arrastia R, Stukas S, Cripton PA, Wellington CL.

Exp Neurol. 2020 Feb;324:113116. doi: 10.1016/j.expneurol.2019.113116. Epub 2019 Nov 15.


Isolation of biotic stress resistance genes from cotton (Gossypium arboreum) and their analysis in model plant tobacco (Nicotiana tabacum) for resistance against cotton leaf curl disease complex.

Mushtaq R, Shahzad K, Shah ZH, Alsamadany H, Alzahrani HAS, Alzahrani Y, Mujtaba T, Ahmed Z, Mansoor S, Bashir A.

J Virol Methods. 2020 Feb;276:113760. doi: 10.1016/j.jviromet.2019.113760. Epub 2019 Nov 9.


Myocardial glucose and fatty acid metabolism is altered and associated with lower cardiac function in young adults with Barth syndrome.

Cade WT, Laforest R, Bohnert KL, Reeds DN, Bittel AJ, de Las Fuentes L, Bashir A, Woodard PK, Pacak CA, Byrne BJ, Gropler RJ, Peterson LR.

J Nucl Cardiol. 2019 Nov 8. doi: 10.1007/s12350-019-01933-3. [Epub ahead of print]


An analysis of adverse events and human error associated with the imaging of patients at a major trauma centre in South Africa.

Bashir AA, Kong VY, Buitendag JJP, Manchev V, Bekker W, Bruce JL, Laing GL, Brysiewicz P, Clarke DL.

S Afr Med J. 2019 Aug 28;109(9):693-697. doi: 10.7196/SAMJ.2019.v109i9.13726.


The drugs don't work: evaluation of educational theatre to gauge and influence public opinion on antimicrobial resistance.

Ahmed R, Bashir A, Brown JEP, Cox JAG, Hilton AC, Hilton CE, Lambert PA, Theodosiou E, Tritter JQ, Watkin SJ, Worthington T.

J Hosp Infect. 2019 Oct 16. pii: S0195-6701(19)30446-3. doi: 10.1016/j.jhin.2019.10.011. [Epub ahead of print]


Recurrent glioblastoma versus late posttreatment changes: diagnostic accuracy of O-(2-[18F]fluoroethyl)-L-tyrosine positron emission tomography (18F-FET PET).

Bashir A, Mathilde Jacobsen S, Mølby Henriksen O, Broholm H, Urup T, Grunnet K, Andrée Larsen V, Møller S, Skjøth-Rasmussen J, Skovgaard Poulsen H, Law I.

Neuro Oncol. 2019 Dec 17;21(12):1595-1606. doi: 10.1093/neuonc/noz166.


Does improved management of asymptomatic bacteriuria in pregnant women prevent Escherichia coli bloodstream infections?

Dhanda J, Gray J, Knox E, Bashir A.

J Hosp Infect. 2020 Jan;104(1):78-79. doi: 10.1016/j.jhin.2019.10.008. Epub 2019 Oct 12. No abstract available.


Microbiological study of used cosmetic products: highlighting possible impact on consumer health.

Bashir A, Lambert P.

J Appl Microbiol. 2020 Feb;128(2):598-605. doi: 10.1111/jam.14479. Epub 2019 Oct 28.


A Complete Genome Screening Program of Clinical Methicillin-Resistant Staphylococcus aureus Isolates Identifies the Origin and Progression of a Neonatal Intensive Care Unit Outbreak.

Sullivan MJ, Altman DR, Chacko KI, Ciferri B, Webster E, Pak TR, Deikus G, Lewis-Sandari M, Khan Z, Beckford C, Rendo A, Samaroo F, Sebra R, Karam-Howlin R, Dingle T, Hamula C, Bashir A, Schadt E, Patel G, Wallach F, Kasarskis A, Gibbs K, van Bakel H.

J Clin Microbiol. 2019 Nov 22;57(12). pii: e01261-19. doi: 10.1128/JCM.01261-19. Print 2019 Dec.


Identification of plasmid encoded osmoregulatory genes from halophilic bacteria isolated from the rhizosphere of halophytes.

Mukhtar S, Ahmad S, Bashir A, Mehnaz S, Mirza MS, Malik KA.

Microbiol Res. 2019 Nov;228:126307. doi: 10.1016/j.micres.2019.126307. Epub 2019 Aug 8.


Development and evaluation of double gene transgenic cotton lines expressing Cry toxins for protection against chewing insect pests.

Siddiqui HA, Asif M, Asad S, Naqvi RZ, Ajaz S, Umer N, Anjum N, Rauf I, Sarwar M, Arshad M, Amin I, Saeed M, Mukhtar Z, Bashir A, Mansoor S.

Sci Rep. 2019 Aug 13;9(1):11774. doi: 10.1038/s41598-019-48188-z.


MsPAC: A tool for haplotype-phased structural variant detection.

Rodriguez OL, Ritz A, Sharp AJ, Bashir A.

Bioinformatics. 2019 Aug 9. pii: btz618. doi: 10.1093/bioinformatics/btz618. [Epub ahead of print]


Cerebral Microvascular Injury: A Potentially Treatable Endophenotype of Traumatic Brain Injury-Induced Neurodegeneration.

Sandsmark DK, Bashir A, Wellington CL, Diaz-Arrastia R.

Neuron. 2019 Aug 7;103(3):367-379. doi: 10.1016/j.neuron.2019.06.002. Review.


Longitudinal Study Investigating the Relationship between Disease Activity and Psychological Status of Patients with Behçet's Disease.

Zulfiqar MH, Shamdas M, Bashir A, Douglas S, Murray PI.

Ocul Immunol Inflamm. 2019 Aug 8:1-9. doi: 10.1080/09273948.2019.1616770. [Epub ahead of print]


Quantifying the burden of trauma imaging on the CT scan service at a major trauma centre in South Africa.

Bashir AA, Kong VY, Weale RD, Bruce JL, Laing GL, Bekker W, Clarke DL.

S Afr J Surg. 2019 Jun;57(2):48-53.


Performance of various cyanide degrading bacteria on the biodegradation of free cyanide in water.

Razanamahandry LC, Onwordi CT, Saban W, Bashir AKH, Mekuto L, Malenga E, Manikandan E, Fosso-Kankeu E, Maaza M, Ntwampe SKO.

J Hazard Mater. 2019 Dec 15;380:120900. doi: 10.1016/j.jhazmat.2019.120900. Epub 2019 Jul 15.


Superbugs-related prolonged admissions in three tertiary hospitals, Kano State, Nigeria.

Bashir A, Garba I, Aliero AA, Kibiya A, Abubakar MH, Ntulume I, Sarkinfada F, Ezera A.

Pan Afr Med J. 2019 Apr 9;32:166. doi: 10.11604/pamj.2019.32.166.18481. eCollection 2019.


Predictors of cardiomyopathy in patients with type-2 diabetes mellitus with and without cardiovascular complications: A cross-sectional study.

Bashir A, Azharuddin M, Rashid I, Murti K, Pandey K.

Diabetes Res Clin Pract. 2019 Aug;154:90-100. doi: 10.1016/j.diabres.2019.06.012. Epub 2019 Jun 22.


Phosphorus release during alkaline treatment of waste activated sludge from wastewater treatment plants with Al salt enhanced phosphorus removal: Speciation and mechanism clarification.

Bashir A, Wang L, Deng S, Liu J, Tian J, Qiu B, Cheng X.

Sci Total Environ. 2019 Oct 20;688:87-93. doi: 10.1016/j.scitotenv.2019.06.207. Epub 2019 Jun 14.


Industrial textile effluent treatment and antibacterial effectiveness of Zea mays L. Dry husk mediated bio-synthesized copper oxide nanoparticles.

Nwanya AC, Razanamahandry LC, Bashir AKH, Ikpo CO, Nwanya SC, Botha S, Ntwampe SKO, Ezema FI, Iwuoha EI, Maaza M.

J Hazard Mater. 2019 Aug 5;375:281-289. doi: 10.1016/j.jhazmat.2019.05.004. Epub 2019 May 3.


Assessment of red cell distribution width, glycaemic control and diabetes related complications - the ARDENT Study.

Arif MA, Syed F, Niazi R, Arif SA, Javed MU, Bashir A, Mansoor S.

J Pak Med Assoc. 2019 Apr;69(4):483-488.


Correction for Bashir et al., "Whole-Genome Shotgun Sequence of Streptococcus agalactiae Sequence Type 176 Strain 3966RFQB from a Dairy Herd in Selangor, Malaysia".

Bashir A, Zunita Z, Jesse FFA, Ramanoon SZ, Mohd-Azmi ML.

Microbiol Resour Announc. 2019 Apr 18;8(16). pii: e00331-19. doi: 10.1128/MRA.00331-19. No abstract available.


Multi-platform discovery of haplotype-resolved structural variation in human genomes.

Chaisson MJP, Sanders AD, Zhao X, Malhotra A, Porubsky D, Rausch T, Gardner EJ, Rodriguez OL, Guo L, Collins RL, Fan X, Wen J, Handsaker RE, Fairley S, Kronenberg ZN, Kong X, Hormozdiari F, Lee D, Wenger AM, Hastie AR, Antaki D, Anantharaman T, Audano PA, Brand H, Cantsilieris S, Cao H, Cerveira E, Chen C, Chen X, Chin CS, Chong Z, Chuang NT, Lambert CC, Church DM, Clarke L, Farrell A, Flores J, Galeev T, Gorkin DU, Gujral M, Guryev V, Heaton WH, Korlach J, Kumar S, Kwon JY, Lam ET, Lee JE, Lee J, Lee WP, Lee SP, Li S, Marks P, Viaud-Martinez K, Meiers S, Munson KM, Navarro FCP, Nelson BJ, Nodzak C, Noor A, Kyriazopoulou-Panagiotopoulou S, Pang AWC, Qiu Y, Rosanio G, Ryan M, Stütz A, Spierings DCJ, Ward A, Welch AE, Xiao M, Xu W, Zhang C, Zhu Q, Zheng-Bradley X, Lowy E, Yakneen S, McCarroll S, Jun G, Ding L, Koh CL, Ren B, Flicek P, Chen K, Gerstein MB, Kwok PY, Lansdorp PM, Marth GT, Sebat J, Shi X, Bashir A, Ye K, Devine SE, Talkowski ME, Mills RE, Marschall T, Korbel JO, Eichler EE, Lee C.

Nat Commun. 2019 Apr 16;10(1):1784. doi: 10.1038/s41467-018-08148-z.


Outcomes of One Anastomosis Gastric Bypass in the IFSO Middle East North Africa (MENA) Region.

Haddad A, Fobi M, Bashir A, Al Hadad M, ElFawal MH, Safadi B, Taha O, Abouzeid M, Alqahtani A, Nimeri A.

Obes Surg. 2019 Aug;29(8):2409-2414. doi: 10.1007/s11695-019-03881-w.


Blunted fat oxidation upon submaximal exercise is partially compensated by enhanced glucose metabolism in children, adolescents, and young adults with Barth syndrome.

Cade WT, Bohnert KL, Peterson LR, Patterson BW, Bittel AJ, Okunade AL, de Las Fuentes L, Steger-May K, Bashir A, Schweitzer GG, Chacko SK, Wanders RJ, Pacak CA, Byrne BJ, Reeds DN.

J Inherit Metab Dis. 2019 May;42(3):480-493. doi: 10.1002/jimd.12094. Epub 2019 Apr 11.


The Possible Role of Helicobacter pylori in Gastric Cancer and Its Management.

Alfarouk KO, Bashir AHH, Aljarbou AN, Ramadan AM, Muddathir AK, AlHoufie STS, Hifny A, Elhassan GO, Ibrahim ME, Alqahtani SS, AlSharari SD, Supuran CT, Rauch C, Cardone RA, Reshkin SJ, Fais S, Harguindey S.

Front Oncol. 2019 Feb 22;9:75. doi: 10.3389/fonc.2019.00075. eCollection 2019. Review.


Pet Food Factory Isolates of Salmonella Serotypes Do Not Demonstrate Enhanced Biofilm Formation Compared to Serotype-Matched Clinical and Veterinary Isolates.

Bashir A, Azeem A, Stedman Y, Hilton AC.

Biomed Res Int. 2019 Jan 29;2019:8569459. doi: 10.1155/2019/8569459. eCollection 2019.


Repetitive closed-head impact model of engineered rotational acceleration (CHIMERA) injury in rats increases impulsivity, decreases dopaminergic innervation in the olfactory tubercle and generates white matter inflammation, tau phosphorylation and degeneration.

Vonder Haar C, Martens KM, Bashir A, McInnes KA, Cheng WH, Cheung H, Stukas S, Barron C, Ladner T, Welch KA, Cripton PA, Winstanley CA, Wellington CL.

Exp Neurol. 2019 Jul;317:87-99. doi: 10.1016/j.expneurol.2019.02.012. Epub 2019 Feb 26.


Bipolar Prodrome Symptom Scale - Abbreviated Screen for Patients: Description and validation.

Van Meter A, Guinart D, Bashir A, Sareen A, Cornblatt BA, Auther A, Carrión RE, Carbon M, Jiménez-Fernández S, Vernal DL, Walitza S, Gerstenberg M, Saba R, Cascio NL, Correll CU.

J Affect Disord. 2019 Apr 15;249:357-365. doi: 10.1016/j.jad.2019.02.040. Epub 2019 Feb 12.


Whole-Genome Shotgun Sequence of Streptococcus agalactiae Sequence Type 176 Strain 3966RFQB from a Dairy Herd in Selangor, Malaysia.

Bashir A, Zunita Z, Jesse FFA, Ramanoon SZ.

Microbiol Resour Announc. 2019 Feb 7;8(6). pii: e01618-18. doi: 10.1128/MRA.01618-18. eCollection 2019 Feb. Erratum in: Microbiol Resour Announc. 2019 Apr 18;8(16):.


A Fractal-Based Authentication Technique Using Sierpinski Triangles in Smart Devices.

Ali A, Rafique H, Arshad T, Alqarni MA, Chauhdary SH, Bashir AK.

Sensors (Basel). 2019 Feb 7;19(3). pii: E678. doi: 10.3390/s19030678.



Bashir A, Sizar O.

StatPearls [Internet]. Treasure Island (FL): StatPearls Publishing; 2019 Jan-.
2019 Oct 8.


A novel mechanism for the anticancer activity of aspirin and salicylates.

Bashir AIJ, Kankipati CS, Jones S, Newman RM, Safrany ST, Perry CJ, Nicholl ID.

Int J Oncol. 2019 Apr;54(4):1256-1270. doi: 10.3892/ijo.2019.4701. Epub 2019 Jan 29.


Mini-Open Rotator Cuff Tear Repair: An Institutional Experience with a Midterm Follow-up.

Bashir A, Seth S, Wani IH, Farooq M, Ul Gani N, Naqshi BF.

Ortop Traumatol Rehabil. 2018 Oct 31;20(5):383-387. doi: 10.5604/01.3001.0012.8274.


CHIMERA repetitive mild traumatic brain injury induces chronic behavioural and neuropathological phenotypes in wild-type and APP/PS1 mice.

Cheng WH, Martens KM, Bashir A, Cheung H, Stukas S, Gibbs E, Namjoshi DR, Button EB, Wilkinson A, Barron CJ, Cashman NR, Cripton PA, Wellington CL.

Alzheimers Res Ther. 2019 Jan 12;11(1):6. doi: 10.1186/s13195-018-0461-0.


Commentary and Reflection Related to the Perspectives of Nurses Toward Telehealth Efficacy and Quality of Health Care.

Bashir A.

Health Serv Res Manag Epidemiol. 2018 Dec 5;5:2333392818800549. doi: 10.1177/2333392818800549. eCollection 2018 Jan-Dec.


Encouraging junior doctors to work in rural Sudan: a discrete choice experiment.

Nurelhuda N, Bashir A, ElKogali S, Mustafa M, Kruk M, Aziz MA.

East Mediterr Health J. 2018 Dec 9;24(9):838-845. doi: 10.26719/2018.24.9.838.


Targeting the last polio sanctuaries with Directly Observed Oral Polio Vaccination (DOPV) in northern Nigeria, (2014-2016).

Korir C, Shuaib F, Adamu U, Bawa S, Musa A, Bashir A, Isiaka A, Ningi A, Warigon C, Richard B, Fiona B, Pascal M, Loveday N, Tegegne SG, Abdul-Aziz M, Suleiman A, Mohammed K, Corkum M, Onoka C, Nsubuga P, Yehualashet YG, Vaz RG, Alemu W.

BMC Public Health. 2018 Dec 13;18(Suppl 4):1314. doi: 10.1186/s12889-018-6182-2.


BST-2 promotes survival in circulation and pulmonary metastatic seeding of breast cancer cells.

Mahauad-Fernandez WD, Naushad W, Panzner TD, Bashir A, Lal G, Okeoma CM.

Sci Rep. 2018 Dec 4;8(1):17608. doi: 10.1038/s41598-018-35710-y.


Exploration of cotton leaf curl virus resistance genes and their screening in Gossypium arboreum by targeting resistance gene analogues.

Mushtaq R, Shahzad K, Mansoor S, Shah ZH, Alsamadany H, Mujtaba T, Al-Zahrani Y, Alzahrani HAS, Ahmed Z, Bashir A.

AoB Plants. 2018 Oct 16;10(6):ply067. doi: 10.1093/aobpla/ply067. eCollection 2018 Dec.


The Cytotoxicity and Synergistic Potential of Aspirin and Aspirin Analogues Towards Oesophageal and Colorectal Cancer.

Kilari RS, Bashir AIJ, Devitt A, Perry CJ, Safrany ST, Nicholl ID.

Curr Clin Pharmacol. 2019;14(2):141-151. doi: 10.2174/1574884713666181112141151.


An End-to-end System for Automatic Characterization of Iba1 Immunopositive Microglia in Whole Slide Imaging.

Kyriazis AD, Noroozizadeh S, Refaee A, Choi W, Chu LT, Bashir A, Cheng WH, Zhao R, Namjoshi DR, Salcudean SE, Wellington CL, Nir G.

Neuroinformatics. 2019 Jul;17(3):373-389. doi: 10.1007/s12021-018-9405-x.


A case report of Lipoblastoma: Presenting as a swelling in the nape of the neck of 14 years old girl.

Changazi SH, Ghuman GM, Bashir A, Bhatti S, Iqbal M, Ismat U.

Int J Surg Case Rep. 2018;53:50-53. doi: 10.1016/j.ijscr.2018.09.037. Epub 2018 Oct 4.


Severe acute alcoholic hepatitis and liver transplant: A never-ending mournful story.

Obed A, Bashir A, Stern S, Jarrad A.

Clin Mol Hepatol. 2018 Dec;24(4):358-366. doi: 10.3350/cmh.2018.0044. Epub 2018 Oct 24. Review.


Polysomnography Provides Useful Clinical Information in the Liberation from Respiratory Technology: A Retrospective Review.

Bashir A, Henningfeld JK, Thompson NE, D'Andrea LA.

Pediatr Pulmonol. 2018 Nov;53(11):1549-1558. doi: 10.1002/ppul.24164. Epub 2018 Sep 24.


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