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Items: 30

1.

PD-1 Expression during Acute Infection Is Repressed through an LSD1-Blimp-1 Axis.

Bally APR, Neeld DK, Lu P, Majumder P, Tang Y, Barwick BG, Wang Q, Boss JM.

J Immunol. 2020 Jan 15;204(2):449-458. doi: 10.4049/jimmunol.1900601. Epub 2019 Dec 6.

PMID:
31811020
2.

Gain of Chromosome 1q is associated with early progression in multiple myeloma patients treated with lenalidomide, bortezomib, and dexamethasone.

Schmidt TM, Barwick BG, Joseph N, Heffner LT, Hofmeister CC, Bernal L, Dhodapkar MV, Gupta VA, Jaye DL, Wu J, Goyal S, Chen Z, Boise LH, Lonial S, Nooka AK, Kaufman JL.

Blood Cancer J. 2019 Nov 25;9(12):94. doi: 10.1038/s41408-019-0254-0.

3.

Integrated phosphoproteomics and transcriptional classifiers reveal hidden RAS signaling dynamics in multiple myeloma.

Lin YT, Way GP, Barwick BG, Mariano MC, Marcoulis M, Ferguson ID, Driessen C, Boise LH, Greene CS, Wiita AP.

Blood Adv. 2019 Nov 12;3(21):3214-3227. doi: 10.1182/bloodadvances.2019000303.

4.

Genetic heterogeneity within collective invasion packs drives leader and follower cell phenotypes.

Zoeller EL, Pedro B, Konen J, Dwivedi B, Rupji M, Sundararaman N, Wang L, Horton JR, Zhong C, Barwick BG, Cheng X, Martinez ED, Torres MP, Kowalski J, Marcus AI, Vertino PM.

J Cell Sci. 2019 Oct 9;132(19). pii: jcs231514. doi: 10.1242/jcs.231514.

PMID:
31515279
5.

Epigenetic programming underpins B cell dysfunction in human SLE.

Scharer CD, Blalock EL, Mi T, Barwick BG, Jenks SA, Deguchi T, Cashman KS, Neary BE, Patterson DG, Hicks SL, Khosroshahi A, Eun-Hyung Lee F, Wei C, Sanz I, Boss JM.

Nat Immunol. 2019 Aug;20(8):1071-1082. doi: 10.1038/s41590-019-0419-9. Epub 2019 Jul 1.

6.

Cell of Origin and Genetic Alterations in the Pathogenesis of Multiple Myeloma.

Barwick BG, Gupta VA, Vertino PM, Boise LH.

Front Immunol. 2019 May 21;10:1121. doi: 10.3389/fimmu.2019.01121. eCollection 2019. Review.

7.

Multiple myeloma immunoglobulin lambda translocations portend poor prognosis.

Barwick BG, Neri P, Bahlis NJ, Nooka AK, Dhodapkar MV, Jaye DL, Hofmeister CC, Kaufman JL, Gupta VA, Auclair D, Keats JJ, Lonial S, Vertino PM, Boise LH.

Nat Commun. 2019 Apr 23;10(1):1911. doi: 10.1038/s41467-019-09555-6.

8.

The Histone Demethylase LSD1 Regulates B Cell Proliferation and Plasmablast Differentiation.

Haines RR, Barwick BG, Scharer CD, Majumder P, Randall TD, Boss JM.

J Immunol. 2018 Nov 1;201(9):2799-2811. doi: 10.4049/jimmunol.1800952. Epub 2018 Sep 19.

9.

B cell activation and plasma cell differentiation are inhibited by de novo DNA methylation.

Barwick BG, Scharer CD, Martinez RJ, Price MJ, Wein AN, Haines RR, Bally APR, Kohlmeier JE, Boss JM.

Nat Commun. 2018 May 15;9(1):1900. doi: 10.1038/s41467-018-04234-4.

10.

Galactic Cosmic Radiation Induces Persistent Epigenome Alterations Relevant to Human Lung Cancer.

Kennedy EM, Powell DR, Li Z, Bell JSK, Barwick BG, Feng H, McCrary MR, Dwivedi B, Kowalski J, Dynan WS, Conneely KN, Vertino PM.

Sci Rep. 2018 Apr 30;8(1):6709. doi: 10.1038/s41598-018-24755-8.

11.

Plasma cell differentiation is controlled by multiple cell division-coupled epigenetic programs.

Scharer CD, Barwick BG, Guo M, Bally APR, Boss JM.

Nat Commun. 2018 Apr 27;9(1):1698. doi: 10.1038/s41467-018-04125-8.

12.

CD86 regulates myeloma cell survival.

Gavile CM, Barwick BG, Newman S, Neri P, Nooka AK, Lonial S, Lee KP, Boise LH.

Blood Adv. 2017 Nov 16;1(25):2307-2319. doi: 10.1182/bloodadvances.2017011601. eCollection 2017 Nov 28.

13.

EZH2 Represses the B Cell Transcriptional Program and Regulates Antibody-Secreting Cell Metabolism and Antibody Production.

Guo M, Price MJ, Patterson DG, Barwick BG, Haines RR, Kania AK, Bradley JE, Randall TD, Boss JM, Scharer CD.

J Immunol. 2018 Feb 1;200(3):1039-1052. doi: 10.4049/jimmunol.1701470. Epub 2017 Dec 29.

14.

LSD1 protects against hippocampal and cortical neurodegeneration.

Christopher MA, Myrick DA, Barwick BG, Engstrom AK, Porter-Stransky KA, Boss JM, Weinshenker D, Levey AI, Katz DJ.

Nat Commun. 2017 Oct 9;8(1):805. doi: 10.1038/s41467-017-00922-9.

15.

14-3-3ζ binds the proteasome, limits proteolytic function and enhances sensitivity to proteasome inhibitors.

Gu Y, Xu K, Torre C, Samur M, Barwick BG, Rupji M, Arora J, Neri P, Kaufman J, Nooka A, Bernal-Mizrachi L, Vertino P, Sun SY, Chen J, Munshi N, Fu H, Kowalski J, Boise LH, Lonial S.

Leukemia. 2018 Mar;32(3):744-751. doi: 10.1038/leu.2017.288. Epub 2017 Sep 19.

PMID:
28924240
16.

MAX is an epigenetic sensor of 5-carboxylcytosine and is altered in multiple myeloma.

Wang D, Hashimoto H, Zhang X, Barwick BG, Lonial S, Boise LH, Vertino PM, Cheng X.

Nucleic Acids Res. 2017 Mar 17;45(5):2396-2407. doi: 10.1093/nar/gkw1184.

17.

Conserved Region C Functions To Regulate PD-1 Expression and Subsequent CD8 T Cell Memory.

Bally AP, Tang Y, Lee JT, Barwick BG, Martinez R, Evavold BD, Boss JM.

J Immunol. 2017 Jan 1;198(1):205-217. Epub 2016 Nov 28.

18.

Plasma cell differentiation is coupled to division-dependent DNA hypomethylation and gene regulation.

Barwick BG, Scharer CD, Bally APR, Boss JM.

Nat Immunol. 2016 Oct;17(10):1216-1225. doi: 10.1038/ni.3519. Epub 2016 Aug 8.

19.

ATAC-seq on biobanked specimens defines a unique chromatin accessibility structure in naïve SLE B cells.

Scharer CD, Blalock EL, Barwick BG, Haines RR, Wei C, Sanz I, Boss JM.

Sci Rep. 2016 Jun 1;6:27030. doi: 10.1038/srep27030.

20.

Factors affecting the persistence of drug-induced reprogramming of the cancer methylome.

Bell JS, Kagey JD, Barwick BG, Dwivedi B, McCabe MT, Kowalski J, Vertino PM.

Epigenetics. 2016 Apr 2;11(4):273-87. doi: 10.1080/15592294.2016.1158364. Epub 2016 Apr 15.

21.

Genome-wide CIITA-binding profile identifies sequence preferences that dictate function versus recruitment.

Scharer CD, Choi NM, Barwick BG, Majumder P, Lohsen S, Boss JM.

Nucleic Acids Res. 2015 Mar 31;43(6):3128-42. doi: 10.1093/nar/gkv182. Epub 2015 Mar 9.

22.

Common distal elements orchestrate CIITA isoform-specific expression in multiple cell types.

Lohsen S, Majumder P, Scharer CD, Barwick BG, Austin JW, Zinzow-Kramer WM, Boss JM.

Genes Immun. 2014 Dec;15(8):543-55. doi: 10.1038/gene.2014.49. Epub 2014 Aug 7.

23.

Wnt signaling in triple negative breast cancer is associated with metastasis.

Dey N, Barwick BG, Moreno CS, Ordanic-Kodani M, Chen Z, Oprea-Ilies G, Tang W, Catzavelos C, Kerstann KF, Sledge GW Jr, Abramovitz M, Bouzyk M, De P, Leyland-Jones BR.

BMC Cancer. 2013 Nov 10;13:537. doi: 10.1186/1471-2407-13-537.

24.

Global DNA methylation remodeling accompanies CD8 T cell effector function.

Scharer CD, Barwick BG, Youngblood BA, Ahmed R, Boss JM.

J Immunol. 2013 Sep 15;191(6):3419-29. doi: 10.4049/jimmunol.1301395. Epub 2013 Aug 16.

25.

A heterozygous IDH1R132H/WT mutation induces genome-wide alterations in DNA methylation.

Duncan CG, Barwick BG, Jin G, Rago C, Kapoor-Vazirani P, Powell DR, Chi JT, Bigner DD, Vertino PM, Yan H.

Genome Res. 2012 Dec;22(12):2339-55. doi: 10.1101/gr.132738.111. Epub 2012 Aug 16.

26.

Age-associated DNA methylation in pediatric populations.

Alisch RS, Barwick BG, Chopra P, Myrick LK, Satten GA, Conneely KN, Warren ST.

Genome Res. 2012 Apr;22(4):623-32. doi: 10.1101/gr.125187.111. Epub 2012 Feb 1.

27.

Molecular characterisation of formalin-fixed paraffin-embedded (FFPE) breast tumour specimens using a custom 512-gene breast cancer bead array-based platform.

Abramovitz M, Barwick BG, Willis S, Young B, Catzavelos C, Li Z, Kodani M, Tang W, Bouzyk M, Moreno CS, Leyland-Jones B.

Br J Cancer. 2011 Nov 8;105(10):1574-81. doi: 10.1038/bjc.2011.355.

28.

Heterozygosity for Pten promotes tumorigenesis in a mouse model of medulloblastoma.

Castellino RC, Barwick BG, Schniederjan M, Buss MC, Becher O, Hambardzumyan D, Macdonald TJ, Brat DJ, Durden DL.

PLoS One. 2010 May 26;5(5):e10849. doi: 10.1371/journal.pone.0010849.

29.

DNA extraction from formalin-fixed, paraffin-embedded tissue.

Tang W, David FB, Wilson MM, Barwick BG, Leyland-Jones BR, Bouzyk MM.

Cold Spring Harb Protoc. 2009 Feb;2009(2):pdb.prot5138. doi: 10.1101/pdb.prot5138. No abstract available.

PMID:
20147068
30.

Prostate cancer genes associated with TMPRSS2-ERG gene fusion and prognostic of biochemical recurrence in multiple cohorts.

Barwick BG, Abramovitz M, Kodani M, Moreno CS, Nam R, Tang W, Bouzyk M, Seth A, Leyland-Jones B.

Br J Cancer. 2010 Feb 2;102(3):570-6. doi: 10.1038/sj.bjc.6605519. Epub 2010 Jan 12.

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