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Items: 1 to 50 of 93

1.

Uncovering the role of hnRNP K, an RNA-binding protein, in B-cell lymphomas.

Gallardo M, Malaney P, Aitken MJL, Zhang X, Link TM, Shah V, Alybayev S, Wu MH, Pageon LR, Ma H, Jacamo R, Yu L, Xu-Monette ZY, Steinman H, Lee HJ, Sarbassov D, Rapado I, Barton MC, Martinez-Lopez J, Bueso-Ramos C, Young KH, Post SM.

J Natl Cancer Inst. 2019 May 11. pii: djz078. doi: 10.1093/jnci/djz078. [Epub ahead of print]

PMID:
31077320
2.

p53: emerging roles in stem cells, development and beyond.

Jain AK, Barton MC.

Development. 2018 Apr 13;145(8). pii: dev158360. doi: 10.1242/dev.158360. Review.

3.

Cross-talk between chromatin acetylation and SUMOylation of tripartite motif-containing protein 24 (TRIM24) impacts cell adhesion.

Appikonda S, Thakkar KN, Shah PK, Dent SYR, Andersen JN, Barton MC.

J Biol Chem. 2018 May 11;293(19):7476-7485. doi: 10.1074/jbc.RA118.002233. Epub 2018 Mar 9.

4.

Histone modification profiling in breast cancer cell lines highlights commonalities and differences among subtypes.

Xi Y, Shi J, Li W, Tanaka K, Allton KL, Richardson D, Li J, Franco HL, Nagari A, Malladi VS, Coletta LD, Simper MS, Keyomarsi K, Shen J, Bedford MT, Shi X, Barton MC, Kraus WL, Li W, Dent SYR.

BMC Genomics. 2018 Feb 20;19(1):150. doi: 10.1186/s12864-018-4533-0.

5.

The influence of anthropogenic edge effects on primate populations and their habitat in a fragmented rainforest in Costa Rica.

Bolt LM, Schreier AL, Voss KA, Sheehan EA, Barrickman NL, Pryor NP, Barton MC.

Primates. 2018 May;59(3):301-311. doi: 10.1007/s10329-018-0652-0. Epub 2018 Feb 6.

PMID:
29411160
6.

Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis.

Franco HL, Nagari A, Malladi VS, Li W, Xi Y, Richardson D, Allton KL, Tanaka K, Li J, Murakami S, Keyomarsi K, Bedford MT, Shi X, Li W, Barton MC, Dent SYR, Kraus WL.

Genome Res. 2018 Feb;28(2):159-170. doi: 10.1101/gr.226019.117. Epub 2017 Dec 22.

7.

GCN5 Regulates FGF Signaling and Activates Selective MYC Target Genes during Early Embryoid Body Differentiation.

Wang L, Koutelou E, Hirsch C, McCarthy R, Schibler A, Lin K, Lu Y, Jeter C, Shen J, Barton MC, Dent SYR.

Stem Cell Reports. 2018 Jan 9;10(1):287-299. doi: 10.1016/j.stemcr.2017.11.009. Epub 2017 Dec 14.

8.

p53-independent DUX4 pathology in cell and animal models of facioscapulohumeral muscular dystrophy.

Bosnakovski D, Gearhart MD, Toso EA, Recht OO, Cucak A, Jain AK, Barton MC, Kyba M.

Dis Model Mech. 2017 Oct 1;10(10):1211-1216. doi: 10.1242/dmm.030064. Epub 2017 Jul 28.

9.

Rapid monoisotopic cisplatin based barcoding for multiplexed mass cytometry.

McCarthy RL, Mak DH, Burks JK, Barton MC.

Sci Rep. 2017 Jun 19;7(1):3779. doi: 10.1038/s41598-017-03610-2.

10.

Sample Preparation for Mass Cytometry Analysis.

McCarthy RL, Duncan AD, Barton MC.

J Vis Exp. 2017 Apr 29;(122). doi: 10.3791/54394.

11.

Systematic Epigenomic Analysis Reveals Chromatin States Associated with Melanoma Progression.

Fiziev P, Akdemir KC, Miller JP, Keung EZ, Samant NS, Sharma S, Natale CA, Terranova CJ, Maitituoheti M, Amin SB, Martinez-Ledesma E, Dhamdhere M, Axelrad JB, Shah A, Cheng CS, Mahadeshwar H, Seth S, Barton MC, Protopopov A, Tsai KY, Davies MA, Garcia BA, Amit I, Chin L, Ernst J, Rai K.

Cell Rep. 2017 Apr 25;19(4):875-889. doi: 10.1016/j.celrep.2017.03.078.

12.

TRIM28 interacts with EZH2 and SWI/SNF to activate genes that promote mammosphere formation.

Li J, Xi Y, Li W, McCarthy RL, Stratton SA, Zou W, Li W, Dent SY, Jain AK, Barton MC.

Oncogene. 2017 May 25;36(21):2991-3001. doi: 10.1038/onc.2016.453. Epub 2017 Jan 9.

13.

LncPRESS1 Is a p53-Regulated LncRNA that Safeguards Pluripotency by Disrupting SIRT6-Mediated De-acetylation of Histone H3K56.

Jain AK, Xi Y, McCarthy R, Allton K, Akdemir KC, Patel LR, Aronow B, Lin C, Li W, Yang L, Barton MC.

Mol Cell. 2016 Dec 1;64(5):967-981. doi: 10.1016/j.molcel.2016.10.039.

14.

Bromodomain Histone Readers and Cancer.

Jain AK, Barton MC.

J Mol Biol. 2017 Jun 30;429(13):2003-2010. doi: 10.1016/j.jmb.2016.11.020. Epub 2016 Nov 24. Review.

PMID:
27890782
15.

Cancer: Acidic shield puts a chink in p53's armour.

Barton MC.

Nature. 2016 Oct 6;538(7623):45-46. doi: 10.1038/nature19469. Epub 2016 Sep 14. No abstract available.

PMID:
27626387
16.

Regulation of gene expression in human cancers by TRIM24.

Appikonda S, Thakkar KN, Barton MC.

Drug Discov Today Technol. 2016 Mar;19:57-63. doi: 10.1016/j.ddtec.2016.05.001. Epub 2016 Aug 10. Review.

PMID:
27769359
17.

Histone H3 lysine 23 acetylation is associated with oncogene TRIM24 expression and a poor prognosis in breast cancer.

Ma L, Yuan L, An J, Barton MC, Zhang Q, Liu Z.

Tumour Biol. 2016 Nov;37(11):14803-14812. Epub 2016 Sep 16.

PMID:
27638829
18.

Outside the p53 RING: Transcription Regulation by Chromatin-Bound MDM2.

Jain AK, Barton MC.

Mol Cell. 2016 Jun 16;62(6):805-807. doi: 10.1016/j.molcel.2016.05.035.

19.

TRIM-ing Ligand Dependence in Castration-Resistant Prostate Cancer.

Patel LR, Barton MC.

Cancer Cell. 2016 Jun 13;29(6):776-778. doi: 10.1016/j.ccell.2016.05.014.

20.

An essential role for UTX in resolution and activation of bivalent promoters.

Dhar SS, Lee SH, Chen K, Zhu G, Oh W, Allton K, Gafni O, Kim YZ, Tomoiga AS, Barton MC, Hanna JH, Wang Z, Li W, Lee MG.

Nucleic Acids Res. 2016 May 5;44(8):3659-74. doi: 10.1093/nar/gkv1516. Epub 2016 Jan 13.

21.

MicroRNA Regulates Hepatocytic Differentiation of Progenitor Cells by Targeting YAP1.

Jung KH, McCarthy RL, Zhou C, Uprety N, Barton MC, Beretta L.

Stem Cells. 2016 May;34(5):1284-96. doi: 10.1002/stem.2283. Epub 2016 Feb 1.

22.

Dual Roles of RNF2 in Melanoma Progression.

Rai K, Akdemir KC, Kwong LN, Fiziev P, Wu CJ, Keung EZ, Sharma S, Samant NS, Williams M, Axelrad JB, Shah A, Yang D, Grimm EA, Barton MC, Milton DR, Heffernan TP, Horner JW, Ekmekcioglu S, Lazar AJ, Ernst J, Chin L.

Cancer Discov. 2015 Dec;5(12):1314-27. doi: 10.1158/2159-8290.CD-15-0493. Epub 2015 Oct 8.

23.

Minimal role of base excision repair in TET-induced global DNA demethylation in HEK293T cells.

Jin C, Qin T, Barton MC, Jelinek J, Issa JP.

Epigenetics. 2015;10(11):1006-13. doi: 10.1080/15592294.2015.1091145.

24.

Corrigendum: Myc and SAGA rewire an alternative splicing network during early somatic cell reprogramming.

Hirsch CL, Akdemir ZC, Wang L, Jayakumaran G, Trcka D, Weiss A, Hernandez JJ, Pan Q, Han H, Xu X, Xia Z, Salinger AP, Wilson M, Vizeacoumar F, Datti A, Li W, Cooney AJ, Barton MC, Blencowe BJ, Wrana JL, Dent SY.

Genes Dev. 2015 Jun 15;29(12):1341. doi: 10.1101/gad.266601.115. No abstract available.

25.

Structure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor.

Palmer WS, Poncet-Montange G, Liu G, Petrocchi A, Reyna N, Subramanian G, Theroff J, Yau A, Kost-Alimova M, Bardenhagen JP, Leo E, Shepard HE, Tieu TN, Shi X, Zhan Y, Zhao S, Barton MC, Draetta G, Toniatti C, Jones P, Geck Do M, Andersen JN.

J Med Chem. 2016 Feb 25;59(4):1440-54. doi: 10.1021/acs.jmedchem.5b00405. Epub 2015 Jul 6.

26.

Myc and SAGA rewire an alternative splicing network during early somatic cell reprogramming.

Hirsch CL, Coban Akdemir Z, Wang L, Jayakumaran G, Trcka D, Weiss A, Hernandez JJ, Pan Q, Han H, Xu X, Xia Z, Salinger AP, Wilson M, Vizeacoumar F, Datti A, Li W, Cooney AJ, Barton MC, Blencowe BJ, Wrana JL, Dent SY.

Genes Dev. 2015 Apr 15;29(8):803-16. doi: 10.1101/gad.255109.114. Epub 2015 Apr 15. Erratum in: Genes Dev. 2015 Jun 15;29(12):1341.

27.

TRIM24 suppresses development of spontaneous hepatic lipid accumulation and hepatocellular carcinoma in mice.

Jiang S, Minter LC, Stratton SA, Yang P, Abbas HA, Akdemir ZC, Pant V, Post S, Gagea M, Lee RG, Lozano G, Barton MC.

J Hepatol. 2015 Feb;62(2):371-9. doi: 10.1016/j.jhep.2014.09.026. Epub 2014 Oct 2.

28.

TRIM24 links glucose metabolism with transformation of human mammary epithelial cells.

Pathiraja TN, Thakkar KN, Jiang S, Stratton S, Liu Z, Gagea M, Shi X, Shah PK, Phan L, Lee MH, Andersen J, Stampfer M, Barton MC.

Oncogene. 2015 May 28;34(22):2836-45. doi: 10.1038/onc.2014.220. Epub 2014 Jul 28.

29.

TET1 is a maintenance DNA demethylase that prevents methylation spreading in differentiated cells.

Jin C, Lu Y, Jelinek J, Liang S, Estecio MR, Barton MC, Issa JP.

Nucleic Acids Res. 2014 Jun;42(11):6956-71. doi: 10.1093/nar/gku372. Epub 2014 May 29.

30.
31.

ZMYND11 links histone H3.3K36me3 to transcription elongation and tumour suppression.

Wen H, Li Y, Xi Y, Jiang S, Stratton S, Peng D, Tanaka K, Ren Y, Xia Z, Wu J, Li B, Barton MC, Li W, Li H, Shi X.

Nature. 2014 Apr 10;508(7495):263-8. doi: 10.1038/nature13045. Epub 2014 Mar 2.

32.

Regulation of estrogen receptor α by histone methyltransferase SMYD2-mediated protein methylation.

Zhang X, Tanaka K, Yan J, Li J, Peng D, Jiang Y, Yang Z, Barton MC, Wen H, Shi X.

Proc Natl Acad Sci U S A. 2013 Oct 22;110(43):17284-9. doi: 10.1073/pnas.1307959110. Epub 2013 Oct 7.

33.

Genome-wide profiling reveals stimulus-specific functions of p53 during differentiation and DNA damage of human embryonic stem cells.

Akdemir KC, Jain AK, Allton K, Aronow B, Xu X, Cooney AJ, Li W, Barton MC.

Nucleic Acids Res. 2014 Jan;42(1):205-23. doi: 10.1093/nar/gkt866. Epub 2013 Sep 27.

34.

Hierarchy of a regenerative cell cycle: cyclin E1 multitasks.

Stratton SA, Barton MC.

Hepatology. 2014 Feb;59(2):370-1. doi: 10.1002/hep.26658. Epub 2013 Dec 13. No abstract available.

PMID:
23913250
35.

p53 regulates a mitotic transcription program and determines ploidy in normal mouse liver.

Kurinna S, Stratton SA, Coban Z, Schumacher JM, Grompe M, Duncan AW, Barton MC.

Hepatology. 2013 May;57(5):2004-13. doi: 10.1002/hep.26233. Epub 2013 Feb 15.

36.

Unmet expectations: miR-34 plays no role in p53-mediated tumor suppression in vivo.

Jain AK, Barton MC.

PLoS Genet. 2012;8(7):e1002859. doi: 10.1371/journal.pgen.1002859. Epub 2012 Jul 26. No abstract available.

37.

Genome-wide location analysis reveals distinct transcriptional circuitry by paralogous regulators Foxa1 and Foxa2.

Bochkis IM, Schug J, Ye DZ, Kurinna S, Stratton SA, Barton MC, Kaestner KH.

PLoS Genet. 2012;8(6):e1002770. doi: 10.1371/journal.pgen.1002770. Epub 2012 Jun 21.

38.

p53 regulates cell cycle and microRNAs to promote differentiation of human embryonic stem cells.

Jain AK, Allton K, Iacovino M, Mahen E, Milczarek RJ, Zwaka TP, Kyba M, Barton MC.

PLoS Biol. 2012;10(2):e1001268. doi: 10.1371/journal.pbio.1001268. Epub 2012 Feb 28.

39.

Integrative genomics: liver regeneration and hepatocellular carcinoma.

Coban Z, Barton MC.

J Cell Biochem. 2012 Jul;113(7):2179-84. doi: 10.1002/jcb.24104.

40.

p53-Mediated regulation of hepatic lipid metabolism: forging links between metabolism, atherogenesis, and cancer.

Stratton SA, Barton MC.

J Hepatol. 2012 Mar;56(3):518-9. doi: 10.1016/j.jhep.2011.10.009. Epub 2011 Oct 31. No abstract available.

41.

HDAC3 at the fulcrum of an epithelial-mesenchymal balance.

Mani SA, Barton MC.

Mol Cell. 2011 Sep 2;43(5):697-8. doi: 10.1016/j.molcel.2011.08.012.

42.

Inhibition of LSD1 sensitizes glioblastoma cells to histone deacetylase inhibitors.

Singh MM, Manton CA, Bhat KP, Tsai WW, Aldape K, Barton MC, Chandra J.

Neuro Oncol. 2011 Aug;13(8):894-903. doi: 10.1093/neuonc/nor049. Epub 2011 Jun 8.

43.

Ubp8 and SAGA regulate Snf1 AMP kinase activity.

Wilson MA, Koutelou E, Hirsch C, Akdemir K, Schibler A, Barton MC, Dent SY.

Mol Cell Biol. 2011 Aug;31(15):3126-35. doi: 10.1128/MCB.01350-10. Epub 2011 May 31.

44.

TRIM24 links a non-canonical histone signature to breast cancer.

Tsai WW, Wang Z, Yiu TT, Akdemir KC, Xia W, Winter S, Tsai CY, Shi X, Schwarzer D, Plunkett W, Aronow B, Gozani O, Fischle W, Hung MC, Patel DJ, Barton MC.

Nature. 2010 Dec 16;468(7326):927-32. doi: 10.1038/nature09542.

45.

Hierarchies of transcriptional regulation during liver regeneration.

Kurinna S, Barton MC.

Prog Mol Biol Transl Sci. 2010;97:201-27. doi: 10.1016/B978-0-12-385233-5.00007-6. Review.

PMID:
21074734
46.

Neuronal transcriptional repressor REST suppresses an Atoh7-independent program for initiating retinal ganglion cell development.

Mao CA, Tsai WW, Cho JH, Pan P, Barton MC, Klein WH.

Dev Biol. 2011 Jan 1;349(1):90-9. doi: 10.1016/j.ydbio.2010.10.008. Epub 2010 Oct 20.

47.

Making sense of ubiquitin ligases that regulate p53.

Jain AK, Barton MC.

Cancer Biol Ther. 2010 Oct 1;10(7):665-72. Epub 2010 Oct 1. Review.

48.

Ronin/Hcf-1 binds to a hyperconserved enhancer element and regulates genes involved in the growth of embryonic stem cells.

Dejosez M, Levine SS, Frampton GM, Whyte WA, Stratton SA, Barton MC, Gunaratne PH, Young RA, Zwaka TP.

Genes Dev. 2010 Jul 15;24(14):1479-84. doi: 10.1101/gad.1935210. Epub 2010 Jun 25.

49.

Direct activation of forkhead box O3 by tumor suppressors p53 and p73 is disrupted during liver regeneration in mice.

Kurinna S, Stratton SA, Tsai WW, Akdemir KC, Gu W, Singh P, Goode T, Darlington GJ, Barton MC.

Hepatology. 2010 Sep;52(3):1023-32. doi: 10.1002/hep.23746.

50.

Foxa1 functions as a pioneer transcription factor at transposable elements to activate Afp during differentiation of embryonic stem cells.

Taube JH, Allton K, Duncan SA, Shen L, Barton MC.

J Biol Chem. 2010 May 21;285(21):16135-44. doi: 10.1074/jbc.M109.088096. Epub 2010 Mar 26.

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