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Items: 25

1.

Overexpression of a rice BAHD acyltransferase gene in switchgrass (Panicum virgatum L.) enhances saccharification.

Li G, Jones KC, Eudes A, Pidatala VR, Sun J, Xu F, Zhang C, Wei T, Jain R, Birdseye D, Canlas PE, Baidoo EEK, Duong PQ, Sharma MK, Singh S, Ruan D, Keasling JD, Mortimer JC, Loqué D, Bartley LE, Scheller HV, Ronald PC.

BMC Biotechnol. 2018 Sep 4;18(1):54. doi: 10.1186/s12896-018-0464-8.

2.

SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae.

Handakumbura PP, Brow K, Whitney IP, Zhao K, Sanguinet KA, Lee SJ, Olins J, Romero-Gamboa SP, Harrington MJ, Bascom CJ, MacKinnon KJ, Veling MT, Liu L, Lee JE, Vogel JP, O'Malley RC, Bezanilla M, Bartley LE, Hazen SP.

Plant J. 2018 Nov;96(3):532-545. doi: 10.1111/tpj.14047. Epub 2018 Sep 12.

PMID:
30054951
3.

Cooperative interactions between seed-borne bacterial and air-borne fungal pathogens on rice.

Jung B, Park J, Kim N, Li T, Kim S, Bartley LE, Kim J, Kim I, Kang Y, Yun K, Choi Y, Lee HH, Ji S, Lee KS, Kim BY, Shon JC, Kim WC, Liu KH, Yoon D, Kim S, Seo YS, Lee J.

Nat Commun. 2018 Jan 2;9(1):31. doi: 10.1038/s41467-017-02430-2.

4.

Proteomics Coupled with Metabolite and Cell Wall Profiling Reveal Metabolic Processes of a Developing Rice Stem Internode.

Lin F, Williams BJ, Thangella PAV, Ladak A, Schepmoes AA, Olivos HJ, Zhao K, Callister SJ, Bartley LE.

Front Plant Sci. 2017 Jul 13;8:1134. doi: 10.3389/fpls.2017.01134. eCollection 2017.

5.

Monolignol ferulate conjugates are naturally incorporated into plant lignins.

Karlen SD, Zhang C, Peck ML, Smith RA, Padmakshan D, Helmich KE, Free HC, Lee S, Smith BG, Lu F, Sedbrook JC, Sibout R, Grabber JH, Runge TM, Mysore KS, Harris PJ, Bartley LE, Ralph J.

Sci Adv. 2016 Oct 14;2(10):e1600393. eCollection 2016 Oct.

6.

Cell Wall Composition and Candidate Biosynthesis Gene Expression During Rice Development.

Lin F, Manisseri C, Fagerström A, Peck ML, Vega-Sánchez ME, Williams B, Chiniquy DM, Saha P, Pattathil S, Conlin B, Zhu L, Hahn MG, Willats WG, Scheller HV, Ronald PC, Bartley LE.

Plant Cell Physiol. 2016 Oct;57(10):2058-2075. Epub 2016 Aug 1.

PMID:
27481893
7.

Advancing Crop Transformation in the Era of Genome Editing.

Altpeter F, Springer NM, Bartley LE, Blechl AE, Brutnell TP, Citovsky V, Conrad LJ, Gelvin SB, Jackson DP, Kausch AP, Lemaux PG, Medford JI, Orozco-Cárdenas ML, Tricoli DM, Van Eck J, Voytas DF, Walbot V, Wang K, Zhang ZJ, Stewart CN Jr.

Plant Cell. 2016 Jul;28(7):1510-20. doi: 10.1105/tpc.16.00196. Epub 2016 Jun 22. Review.

8.

Prohead RNA: a noncoding viral RNA of novel structure and function.

Hill AC, Bartley LE, Schroeder SJ.

Wiley Interdiscip Rev RNA. 2016 Jul;7(4):428-37. doi: 10.1002/wrna.1330. Epub 2016 Jan 25. Review.

9.
10.

Overexpression of a BAHD acyltransferase, OsAt10, alters rice cell wall hydroxycinnamic acid content and saccharification.

Bartley LE, Peck ML, Kim SR, Ebert B, Manisseri C, Chiniquy DM, Sykes R, Gao L, Rautengarten C, Vega-Sánchez ME, Benke PI, Canlas PE, Cao P, Brewer S, Lin F, Smith WL, Zhang X, Keasling JD, Jentoff RE, Foster SB, Zhou J, Ziebell A, An G, Scheller HV, Ronald PC.

Plant Physiol. 2013 Apr;161(4):1615-33. doi: 10.1104/pp.112.208694. Epub 2013 Feb 7.

11.

Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).

Zhang JY, Lee YC, Torres-Jerez I, Wang M, Yin Y, Chou WC, He J, Shen H, Srivastava AC, Pennacchio C, Lindquist E, Grimwood J, Schmutz J, Xu Y, Sharma M, Sharma R, Bartley LE, Ronald PC, Saha MC, Dixon RA, Tang Y, Udvardi MK.

Plant J. 2013 Apr;74(1):160-73. doi: 10.1111/tpj.12104. Epub 2013 Feb 18.

12.

A genome-wide survey of switchgrass genome structure and organization.

Sharma MK, Sharma R, Cao P, Jenkins J, Bartley LE, Qualls M, Grimwood J, Schmutz J, Rokhsar D, Ronald PC.

PLoS One. 2012;7(4):e33892. doi: 10.1371/journal.pone.0033892. Epub 2012 Apr 12.

13.

A rice transient assay system identifies a novel domain in NRR required for interaction with NH1/OsNPR1 and inhibition of NH1-mediated transcriptional activation.

Chern M, Bai W, Sze-To WH, Canlas PE, Bartley LE, Ronald PC.

Plant Methods. 2012 Feb 21;8(1):6. doi: 10.1186/1746-4811-8-6.

14.

Towards establishment of a rice stress response interactome.

Seo YS, Chern M, Bartley LE, Han M, Jung KH, Lee I, Walia H, Richter T, Xu X, Cao P, Bai W, Ramanan R, Amonpant F, Arul L, Canlas PE, Ruan R, Park CJ, Chen X, Hwang S, Jeon JS, Ronald PC.

PLoS Genet. 2011 Apr;7(4):e1002020. doi: 10.1371/journal.pgen.1002020. Epub 2011 Apr 14.

15.

OsWRKY IIa Transcription Factors Modulate Rice Innate Immunity.

Peng Y, Bartley LE, Canlas P, Ronald PC.

Rice (N Y). 2010 Mar;3(1):36-42. Epub 2010 Feb 20.

16.

Construction of a rice glycosyltransferase phylogenomic database and identification of rice-diverged glycosyltransferases.

Cao PJ, Bartley LE, Jung KH, Ronald PC.

Mol Plant. 2008 Sep;1(5):858-77. doi: 10.1093/mp/ssn052.

17.

A rice kinase-protein interaction map.

Ding X, Richter T, Chen M, Fujii H, Seo YS, Xie M, Zheng X, Kanrar S, Stevenson RA, Dardick C, Li Y, Jiang H, Zhang Y, Yu F, Bartley LE, Chern M, Bart R, Chen X, Zhu L, Farmerie WG, Gribskov M, Zhu JK, Fromm ME, Ronald PC, Song WY.

Plant Physiol. 2009 Mar;149(3):1478-92. doi: 10.1104/pp.108.128298. Epub 2008 Dec 24.

18.

Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy.

Jung KH, Dardick C, Bartley LE, Cao P, Phetsom J, Canlas P, Seo YS, Shultz M, Ouyang S, Yuan Q, Frank BC, Ly E, Zheng L, Jia Y, Hsia AP, An K, Chou HH, Rocke D, Lee GC, Schnable PS, An G, Buell CR, Ronald PC.

PLoS One. 2008 Oct 6;3(10):e3337. doi: 10.1371/journal.pone.0003337.

19.

OsWRKY62 is a negative regulator of basal and Xa21-mediated defense against Xanthomonas oryzae pv. oryzae in rice.

Peng Y, Bartley LE, Chen X, Dardick C, Chern M, Ruan R, Canlas PE, Ronald PC.

Mol Plant. 2008 May;1(3):446-58. doi: 10.1093/mp/ssn024.

20.

From the Academy: Colloquium review. Unique characteristics of Xanthomonas oryzae pv. oryzae AvrXa21 and implications for plant innate immunity.

Lee SW, Han SW, Bartley LE, Ronald PC.

Proc Natl Acad Sci U S A. 2006 Dec 5;103(49):18395-400. Epub 2006 Nov 2. Review.

21.

Exploration of the transition state for tertiary structure formation between an RNA helix and a large structured RNA.

Bartley LE, Zhuang X, Das R, Chu S, Herschlag D.

J Mol Biol. 2003 May 16;328(5):1011-26.

PMID:
12729738
22.

A single-molecule study of RNA catalysis and folding.

Zhuang X, Bartley LE, Babcock HP, Russell R, Ha T, Herschlag D, Chu S.

Science. 2000 Jun 16;288(5473):2048-51.

23.

Use of duplex rigidity for stability and specificity in RNA tertiary structure.

Narlikar GJ, Bartley LE, Herschlag D.

Biochemistry. 2000 May 23;39(20):6183-9.

PMID:
10821693
25.

The therapy centre; a community resource.

BARTLEY LE.

Can J Occup Ther. 1955 Mar;22(1):17-20. No abstract available.

PMID:
14364367

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