Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 261

1.

Global analyses of the dynamics of mammalian microRNA metabolism.

Kingston E, Bartel D.

Genome Res. 2019 Sep 13. pii: gr.251421.119. doi: 10.1101/gr.251421.119. [Epub ahead of print]

PMID:
31519739
2.

m6A modification of a 3' UTR site reduces RME1 mRNA levels to promote meiosis.

Bushkin GG, Pincus D, Morgan JT, Richardson K, Lewis C, Chan SH, Bartel DP, Fink GR.

Nat Commun. 2019 Jul 30;10(1):3414. doi: 10.1038/s41467-019-11232-7.

3.

Early genome activation in Drosophila is extensive with an initial tendency for aborted transcripts and retained introns.

Kwasnieski JC, Orr-Weaver TL, Bartel DP.

Genome Res. 2019 Jul;29(7):1188-1197. doi: 10.1101/gr.242164.118. Epub 2019 Jun 24.

PMID:
31235656
4.

Distinct contribution of axonal and somatodendritic serotonin transporters in drosophila olfaction.

Kasture AS, Bartel D, Steinkellner T, Sucic S, Hummel T, Freissmuth M.

Neuropharmacology. 2019 Mar 6. pii: S0028-3908(19)30084-X. doi: 10.1016/j.neuropharm.2019.03.007. [Epub ahead of print]

5.

Excised linear introns regulate growth in yeast.

Morgan JT, Fink GR, Bartel DP.

Nature. 2019 Jan;565(7741):606-611. doi: 10.1038/s41586-018-0828-1. Epub 2019 Jan 16.

6.

Evolutionary history of Polyneoptera and its implications for our understanding of early winged insects.

Wipfler B, Letsch H, Frandsen PB, Kapli P, Mayer C, Bartel D, Buckley TR, Donath A, Edgerly-Rooks JS, Fujita M, Liu S, Machida R, Mashimo Y, Misof B, Niehuis O, Peters RS, Petersen M, Podsiadlowski L, Schütte K, Shimizu S, Uchifune T, Wilbrandt J, Yan E, Zhou X, Simon S.

Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):3024-3029. doi: 10.1073/pnas.1817794116. Epub 2019 Jan 14.

7.

Genetic dissection of the miR-200-Zeb1 axis reveals its importance in tumor differentiation and invasion.

Title AC, Hong SJ, Pires ND, Hasenöhrl L, Godbersen S, Stokar-Regenscheit N, Bartel DP, Stoffel M.

Nat Commun. 2018 Nov 7;9(1):4671. doi: 10.1038/s41467-018-07130-z.

8.

Predicting microRNA targeting efficacy in Drosophila.

Agarwal V, Subtelny AO, Thiru P, Ulitsky I, Bartel DP.

Genome Biol. 2018 Oct 4;19(1):152. doi: 10.1186/s13059-018-1504-3.

9.

The helicase Ded1p controls use of near-cognate translation initiation codons in 5' UTRs.

Guenther UP, Weinberg DE, Zubradt MM, Tedeschi FA, Stawicki BN, Zagore LL, Brar GA, Licatalosi DD, Bartel DP, Weissman JS, Jankowsky E.

Nature. 2018 Jul;559(7712):130-134. doi: 10.1038/s41586-018-0258-0. Epub 2018 Jun 27.

10.

A Network of Noncoding Regulatory RNAs Acts in the Mammalian Brain.

Kleaveland B, Shi CY, Stefano J, Bartel DP.

Cell. 2018 Jul 12;174(2):350-362.e17. doi: 10.1016/j.cell.2018.05.022. Epub 2018 Jun 7.

11.

New CRISPR Mutagenesis Strategies Reveal Variation in Repair Mechanisms among Fungi.

Vyas VK, Bushkin GG, Bernstein DA, Getz MA, Sewastianik M, Barrasa MI, Bartel DP, Fink GR.

mSphere. 2018 Apr 25;3(2). pii: e00154-18. doi: 10.1128/mSphere.00154-18. Print 2018 Apr 25.

12.

Metazoan MicroRNAs.

Bartel DP.

Cell. 2018 Mar 22;173(1):20-51. doi: 10.1016/j.cell.2018.03.006. Review.

13.

A Seed Mismatch Enhances Argonaute2-Catalyzed Cleavage and Partially Rescues Severely Impaired Cleavage Found in Fish.

Chen GR, Sive H, Bartel DP.

Mol Cell. 2017 Dec 21;68(6):1095-1107.e5. doi: 10.1016/j.molcel.2017.11.032.

14.

The influence of microRNAs and poly(A) tail length on endogenous mRNA-protein complexes.

Rissland OS, Subtelny AO, Wang M, Lugowski A, Nicholson B, Laver JD, Sidhu SS, Smibert CA, Lipshitz HD, Bartel DP.

Genome Biol. 2017 Oct 31;18(1):211. doi: 10.1186/s13059-017-1330-z.

15.

Widespread Influence of 3'-End Structures on Mammalian mRNA Processing and Stability.

Wu X, Bartel DP.

Cell. 2017 May 18;169(5):905-917.e11. doi: 10.1016/j.cell.2017.04.036.

16.

Decreased bed rest post-percutaneous coronary intervention with a 7-French arterial sheath and its effects on vascular complications.

Wentworth LJ, Bechtum EL, Hoffman JG, Kramer RR, Bartel DC, Slusser JP, Tilbury RT.

J Clin Nurs. 2018 Jan;27(1-2):e109-e115. doi: 10.1111/jocn.13880. Epub 2017 Sep 20.

PMID:
28514498
17.

kpLogo: positional k-mer analysis reveals hidden specificity in biological sequences.

Wu X, Bartel DP.

Nucleic Acids Res. 2017 Jul 3;45(W1):W534-W538. doi: 10.1093/nar/gkx323.

18.

5HTR3A-driven GFP labels immature olfactory sensory neurons.

Finger TE, Bartel DL, Shultz N, Goodson NB, Greer CA.

J Comp Neurol. 2017 May 1;525(7):1743-1755. doi: 10.1002/cne.24180. Epub 2017 Feb 27.

19.

Genome-Scale Networks Link Neurodegenerative Disease Genes to α-Synuclein through Specific Molecular Pathways.

Khurana V, Peng J, Chung CY, Auluck PK, Fanning S, Tardiff DF, Bartels T, Koeva M, Eichhorn SW, Benyamini H, Lou Y, Nutter-Upham A, Baru V, Freyzon Y, Tuncbag N, Costanzo M, San Luis BJ, Schöndorf DC, Barrasa MI, Ehsani S, Sanjana N, Zhong Q, Gasser T, Bartel DP, Vidal M, Deleidi M, Boone C, Fraenkel E, Berger B, Lindquist S.

Cell Syst. 2017 Feb 22;4(2):157-170.e14. doi: 10.1016/j.cels.2016.12.011. Epub 2017 Jan 25.

20.

Impact of MicroRNA Levels, Target-Site Complementarity, and Cooperativity on Competing Endogenous RNA-Regulated Gene Expression.

Denzler R, McGeary SE, Title AC, Agarwal V, Bartel DP, Stoffel M.

Mol Cell. 2016 Nov 3;64(3):565-579. doi: 10.1016/j.molcel.2016.09.027. Epub 2016 Oct 27.

21.

RNA G-quadruplexes are globally unfolded in eukaryotic cells and depleted in bacteria.

Guo JU, Bartel DP.

Science. 2016 Sep 23;353(6306). pii: aaf5371.

22.

mRNA poly(A)-tail changes specified by deadenylation broadly reshape translation in Drosophila oocytes and early embryos.

Eichhorn SW, Subtelny AO, Kronja I, Kwasnieski JC, Orr-Weaver TL, Bartel DP.

Elife. 2016 Jul 30;5. pii: e16955. doi: 10.7554/eLife.16955.

23.

Load Sharing Among Collateral Ligaments, Articular Surfaces, and the Tibial Post in Constrained Condylar Knee Arthroplasty.

Wang X, Malik A, Bartel DL, Wright TM, Padgett DE.

J Biomech Eng. 2016 Aug 1;138(8). doi: 10.1115/1.4033678.

PMID:
27223672
24.

Morphological and Genetic Analysis of the Acerentomon doderoi Group (Protura: Acerentomidae) with Description of A. christiani sp. nov.

Shrubovych J, Bartel D, Szucsich NU, Resch MC, Pass G.

PLoS One. 2016 Apr 13;11(4):e0148033. doi: 10.1371/journal.pone.0148033. eCollection 2016.

25.

Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation.

Weinberg DE, Shah P, Eichhorn SW, Hussmann JA, Plotkin JB, Bartel DP.

Cell Rep. 2016 Feb 23;14(7):1787-1799. doi: 10.1016/j.celrep.2016.01.043. Epub 2016 Feb 11.

26.

The Menu of Features that Define Primary MicroRNAs and Enable De Novo Design of MicroRNA Genes.

Fang W, Bartel DP.

Mol Cell. 2015 Oct 1;60(1):131-45. doi: 10.1016/j.molcel.2015.08.015. Epub 2015 Sep 24.

27.

Independent regulation of vertebral number and vertebral identity by microRNA-196 paralogs.

Wong SF, Agarwal V, Mansfield JH, Denans N, Schwartz MG, Prosser HM, Pourquié O, Bartel DP, Tabin CJ, McGlinn E.

Proc Natl Acad Sci U S A. 2015 Sep 1;112(35):E4884-93. doi: 10.1073/pnas.1512655112. Epub 2015 Aug 17.

28.

Predicting effective microRNA target sites in mammalian mRNAs.

Agarwal V, Bell GW, Nam JW, Bartel DP.

Elife. 2015 Aug 12;4. doi: 10.7554/eLife.05005.

29.

Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species.

Hezroni H, Koppstein D, Schwartz MG, Avrutin A, Bartel DP, Ulitsky I.

Cell Rep. 2015 May 19;11(7):1110-22. doi: 10.1016/j.celrep.2015.04.023. Epub 2015 May 7.

30.

Odorant receptors regulate the final glomerular coalescence of olfactory sensory neuron axons.

Rodriguez-Gil DJ, Bartel DL, Jaspers AW, Mobley AS, Imamura F, Greer CA.

Proc Natl Acad Sci U S A. 2015 May 5;112(18):5821-6. doi: 10.1073/pnas.1417955112. Epub 2015 Apr 20.

31.

Sequencing the cap-snatching repertoire of H1N1 influenza provides insight into the mechanism of viral transcription initiation.

Koppstein D, Ashour J, Bartel DP.

Nucleic Acids Res. 2015 May 26;43(10):5052-64. doi: 10.1093/nar/gkv333. Epub 2015 Apr 21.

32.

Dendrodendritic synapses in the mouse olfactory bulb external plexiform layer.

Bartel DL, Rela L, Hsieh L, Greer CA.

J Comp Neurol. 2015 Jun 1;523(8):1145-61. doi: 10.1002/cne.23714. Epub 2015 Feb 17.

33.

Phylogenomics resolves the timing and pattern of insect evolution.

Misof B, Liu S, Meusemann K, Peters RS, Donath A, Mayer C, Frandsen PB, Ware J, Flouri T, Beutel RG, Niehuis O, Petersen M, Izquierdo-Carrasco F, Wappler T, Rust J, Aberer AJ, Aspöck U, Aspöck H, Bartel D, Blanke A, Berger S, Böhm A, Buckley TR, Calcott B, Chen J, Friedrich F, Fukui M, Fujita M, Greve C, Grobe P, Gu S, Huang Y, Jermiin LS, Kawahara AY, Krogmann L, Kubiak M, Lanfear R, Letsch H, Li Y, Li Z, Li J, Lu H, Machida R, Mashimo Y, Kapli P, McKenna DD, Meng G, Nakagaki Y, Navarrete-Heredia JL, Ott M, Ou Y, Pass G, Podsiadlowski L, Pohl H, von Reumont BM, Schütte K, Sekiya K, Shimizu S, Slipinski A, Stamatakis A, Song W, Su X, Szucsich NU, Tan M, Tan X, Tang M, Tang J, Timelthaler G, Tomizuka S, Trautwein M, Tong X, Uchifune T, Walzl MG, Wiegmann BM, Wilbrandt J, Wipfler B, Wong TK, Wu Q, Wu G, Xie Y, Yang S, Yang Q, Yeates DK, Yoshizawa K, Zhang Q, Zhang R, Zhang W, Zhang Y, Zhao J, Zhou C, Zhou L, Ziesmann T, Zou S, Li Y, Xu X, Zhang Y, Yang H, Wang J, Wang J, Kjer KM, Zhou X.

Science. 2014 Nov 7;346(6210):763-7. doi: 10.1126/science.1257570. Epub 2014 Nov 6.

34.

mRNA destabilization is the dominant effect of mammalian microRNAs by the time substantial repression ensues.

Eichhorn SW, Guo H, McGeary SE, Rodriguez-Mias RA, Shin C, Baek D, Hsu SH, Ghoshal K, Villén J, Bartel DP.

Mol Cell. 2014 Oct 2;56(1):104-15. doi: 10.1016/j.molcel.2014.08.028. Epub 2014 Sep 25.

35.

In vitro and in vivo characterization of the actin polymerizing compound chondramide as an angiogenic inhibitor.

Menhofer MH, Bartel D, Liebl J, Kubisch R, Busse J, Wagner E, Müller R, Vollmar AM, Zahler S.

Cardiovasc Res. 2014 Nov 1;104(2):303-14. doi: 10.1093/cvr/cvu210. Epub 2014 Sep 19.

PMID:
25239826
36.

Paraphyly and budding speciation in the hairy snail (Pulmonata, Hygromiidae).

Kruckenhauser L, Duda M, Bartel D, Sattmann H, Harl J, Kirchner S, Haring E.

Zool Scr. 2014 May 1;43(3):273-288.

37.

Expanded identification and characterization of mammalian circular RNAs.

Guo JU, Agarwal V, Guo H, Bartel DP.

Genome Biol. 2014 Jul 29;15(7):409. doi: 10.1186/s13059-014-0409-z.

38.

Widespread changes in the posttranscriptional landscape at the Drosophila oocyte-to-embryo transition.

Kronja I, Yuan B, Eichhorn SW, Dzeyk K, Krijgsveld J, Bartel DP, Orr-Weaver TL.

Cell Rep. 2014 Jun 12;7(5):1495-1508. doi: 10.1016/j.celrep.2014.05.002. Epub 2014 May 29.

39.

Asymmetric varus and valgus stability of the anatomic cadaver knee and the load sharing between collateral ligaments and bearing surfaces.

Wang X, Malik A, Bartel DL, Wickiewicz TL, Wright T.

J Biomech Eng. 2014 Aug;136(8). doi: 10.1115/1.4027662.

PMID:
24828416
40.

Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance.

Denzler R, Agarwal V, Stefano J, Bartel DP, Stoffel M.

Mol Cell. 2014 Jun 5;54(5):766-76. doi: 10.1016/j.molcel.2014.03.045. Epub 2014 May 1.

41.

Global analyses of the effect of different cellular contexts on microRNA targeting.

Nam JW, Rissland OS, Koppstein D, Abreu-Goodger C, Jan CH, Agarwal V, Yildirim MA, Rodriguez A, Bartel DP.

Mol Cell. 2014 Mar 20;53(6):1031-1043. doi: 10.1016/j.molcel.2014.02.013. Epub 2014 Mar 13.

42.

Where taxonomy based on subtle morphological differences is perfectly mirrored by huge genetic distances: DNA barcoding in Protura (Hexapoda).

Resch MC, Shrubovych J, Bartel D, Szucsich NU, Timelthaler G, Bu Y, Walzl M, Pass G.

PLoS One. 2014 Mar 7;9(3):e90653. doi: 10.1371/journal.pone.0090653. eCollection 2014.

43.

Identification of Sola l 4 as Bet v 1 homologous pathogenesis related-10 allergen in tomato fruits.

Wangorsch A, Jamin A, Foetisch K, Malczyk A, Reuter A, Vierecke S, Schülke S, Bartel D, Mahler V, Lidholm J, Vieths S, Scheurer S.

Mol Nutr Food Res. 2015 Mar;59(3):582-92. doi: 10.1002/mnfr.201300620. Epub 2014 Feb 8.

PMID:
24510486
44.

Poly(A)-tail profiling reveals an embryonic switch in translational control.

Subtelny AO, Eichhorn SW, Chen GR, Sive H, Bartel DP.

Nature. 2014 Apr 3;508(7494):66-71. doi: 10.1038/nature13007. Epub 2014 Jan 29.

45.

Reactive microglia after taste nerve injury: comparison to nerve injury models of chronic pain.

Bartel DL, Finger TE.

F1000Res. 2013 Feb 28;2:65. doi: 10.12688/f1000research.2-65.v1. eCollection 2013.

46.

Nucleus of the solitary tract in the C57BL/6J mouse: Subnuclear parcellation, chorda tympani nerve projections, and brainstem connections.

Ganchrow D, Ganchrow JR, Cicchini V, Bartel DL, Kaufman D, Girard D, Whitehead MC.

J Comp Neurol. 2014 May 1;522(7):1565-96. doi: 10.1002/cne.23484. Erratum in: J Comp Neurol. 2014 Jun 15;522(9). doi:10.1002/cne.23599.

47.

3' UTR-isoform choice has limited influence on the stability and translational efficiency of most mRNAs in mouse fibroblasts.

Spies N, Burge CB, Bartel DP.

Genome Res. 2013 Dec;23(12):2078-90. doi: 10.1101/gr.156919.113. Epub 2013 Sep 26.

48.

Kinetics, cross-reactivity, and specificity of Bet v 1-specific IgG4 antibodies induced by immunotherapy with birch pollen.

Subbarayal B, Schiller D, Möbs C, de Jong NW, Ebner C, Reider N, Bartel D, Lidholm J, Pfützner W, Gerth van Wijk R, Vieths S, Bohle B.

Allergy. 2013 Nov;68(11):1377-86. doi: 10.1111/all.12236. Epub 2013 Sep 21.

PMID:
24053565
49.

lincRNAs: genomics, evolution, and mechanisms.

Ulitsky I, Bartel DP.

Cell. 2013 Jul 3;154(1):26-46. doi: 10.1016/j.cell.2013.06.020. Review.

50.

Synthetic shuffling and in vitro selection reveal the rugged adaptive fitness landscape of a kinase ribozyme.

Curtis EA, Bartel DP.

RNA. 2013 Aug;19(8):1116-28. doi: 10.1261/rna.037572.112. Epub 2013 Jun 24.

Supplemental Content

Loading ...
Support Center