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Items: 1 to 50 of 171

1.

Deletion of S-Layer Associated Ig-Like Domain Protein Disrupts the Lactobacillus acidophilus Cell Surface.

Klotz C, Goh YJ, O'Flaherty S, Johnson B, Barrangou R.

Front Microbiol. 2020 Mar 17;11:345. doi: 10.3389/fmicb.2020.00345. eCollection 2020.

2.

Strain-dependent inhibition of Clostridioides difficile by commensal Clostridia encoding the bile acid inducible (bai) operon.

Reed AD, Nethery MA, Stewart A, Barrangou R, Theriot CM.

J Bacteriol. 2020 Mar 16. pii: JB.00039-20. doi: 10.1128/JB.00039-20. [Epub ahead of print]

PMID:
32179626
3.

In Vivo Targeting of Clostridioides difficile Using Phage-Delivered CRISPR-Cas3 Antimicrobials.

Selle K, Fletcher JR, Tuson H, Schmitt DS, McMillan L, Vridhambal GS, Rivera AJ, Montgomery SA, Fortier LC, Barrangou R, Theriot CM, Ousterout DG.

mBio. 2020 Mar 10;11(2). pii: e00019-20. doi: 10.1128/mBio.00019-20.

4.

CRISPR Shields: Fending Off Diverse Cas Nucleases with Nucleus-like Structures.

Barrangou R, Sontheimer EJ.

Mol Cell. 2020 Mar 5;77(5):934-936. doi: 10.1016/j.molcel.2020.02.015.

PMID:
32142691
5.

Ushering in the Next CRISPR Decade.

Barrangou R.

CRISPR J. 2020 Feb;3(1):2. doi: 10.1089/crispr.2020.29085.rba. No abstract available.

PMID:
32091249
6.

Comparative Analysis of Lactobacillus gasseri and Lactobacillus crispatus Isolated From Human Urogenital and Gastrointestinal Tracts.

Pan M, Hidalgo-Cantabrana C, Goh YJ, Sanozky-Dawes R, Barrangou R.

Front Microbiol. 2020 Jan 22;10:3146. doi: 10.3389/fmicb.2019.03146. eCollection 2019.

7.

Combining omics technologies with CRISPR-based genome editing to study food microbes.

Pan M, Barrangou R.

Curr Opin Biotechnol. 2020 Feb;61:198-208. doi: 10.1016/j.copbio.2019.12.027. Epub 2020 Feb 5. Review.

PMID:
32035346
8.

Characterization and applications of Type I CRISPR-Cas systems.

Hidalgo-Cantabrana C, Barrangou R.

Biochem Soc Trans. 2020 Feb 28;48(1):15-23. doi: 10.1042/BST20190119.

PMID:
31922192
9.

Foresight is 2020: Ten Bold Predictions for the New CRISPR Year.

Barrangou R.

CRISPR J. 2019 Dec;2(6):341-342. doi: 10.1089/crispr.2019.29075.rba. No abstract available.

PMID:
31860348
10.

Partnering with bioRxiv.

Barrangou R.

CRISPR J. 2019 Dec;2(6):342. doi: 10.1089/crispr.2019.29076.rba. No abstract available.

PMID:
31860345
11.

Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants.

Makarova KS, Wolf YI, Iranzo J, Shmakov SA, Alkhnbashi OS, Brouns SJJ, Charpentier E, Cheng D, Haft DH, Horvath P, Moineau S, Mojica FJM, Scott D, Shah SA, Siksnys V, Terns MP, Venclovas Č, White MF, Yakunin AF, Yan W, Zhang F, Garrett RA, Backofen R, van der Oost J, Barrangou R, Koonin EV.

Nat Rev Microbiol. 2020 Feb;18(2):67-83. doi: 10.1038/s41579-019-0299-x. Epub 2019 Dec 19. Review.

PMID:
31857715
12.

Comparative genomics of eight Lactobacillus buchneri strains isolated from food spoilage.

Nethery MA, Henriksen ED, Daughtry KV, Johanningsmeier SD, Barrangou R.

BMC Genomics. 2019 Nov 27;20(1):902. doi: 10.1186/s12864-019-6274-0.

13.

Author Correction: Collaborative networks in gene editing.

Huang Y, Porter A, Zhang Y, Barrangou R.

Nat Biotechnol. 2019 Dec;37(12):1522. doi: 10.1038/s41587-019-0353-2.

PMID:
31728065
14.

The repurposing of type I-E CRISPR-Cascade for gene activation in plants.

Young JK, Gasior SL, Jones S, Wang L, Navarro P, Vickroy B, Barrangou R.

Commun Biol. 2019 Oct 18;2:383. doi: 10.1038/s42003-019-0637-6. eCollection 2019.

15.

Thinking About CRISPR: The Ethics of Human Genome Editing.

Barrangou R.

CRISPR J. 2019 Oct;2(5):247-248. doi: 10.1089/crispr.2019.29072.rba. No abstract available.

PMID:
31599676
16.

Collaborative networks in gene editing.

Huang Y, Porter A, Zhang Y, Barrangou R.

Nat Biotechnol. 2019 Oct;37(10):1107-1109. doi: 10.1038/s41587-019-0275-z. No abstract available. Erratum in: Nat Biotechnol. 2019 Dec;37(12):1522.

PMID:
31578513
17.

Targeted transcriptional modulation with type I CRISPR-Cas systems in human cells.

Pickar-Oliver A, Black JB, Lewis MM, Mutchnick KJ, Klann TS, Gilcrest KA, Sitton MJ, Nelson CE, Barrera A, Bartelt LC, Reddy TE, Beisel CL, Barrangou R, Gersbach CA.

Nat Biotechnol. 2019 Dec;37(12):1493-1501. doi: 10.1038/s41587-019-0235-7. Epub 2019 Sep 23.

18.

Bringing CRISPR to the Cinema.

Barrangou R.

CRISPR J. 2019 Aug;2:187. doi: 10.1089/crispr.2019.29070.rba. No abstract available.

PMID:
31436507
19.

Genome editing using the endogenous type I CRISPR-Cas system in Lactobacillus crispatus.

Hidalgo-Cantabrana C, Goh YJ, Pan M, Sanozky-Dawes R, Barrangou R.

Proc Natl Acad Sci U S A. 2019 Aug 6;116(32):15774-15783. doi: 10.1073/pnas.1905421116. Epub 2019 Jul 24.

20.

Short communication: Transcriptional response to a large genomic island deletion in the dairy starter culture Streptococcus thermophilus.

Selle K, Andersen JM, Barrangou R.

J Dairy Sci. 2019 Sep;102(9):7800-7806. doi: 10.3168/jds.2019-16397. Epub 2019 Jul 3.

PMID:
31279547
21.

Taking CRISPR to New Heights.

Barrangou R.

CRISPR J. 2019 Jun;2:133. doi: 10.1089/crispr.2019.29064.rba. No abstract available.

PMID:
31225750
22.

Outcomes and characterization of chromosomal self-targeting by native CRISPR-Cas systems in Streptococcus thermophilus.

Cañez C, Selle K, Goh YJ, Barrangou R.

FEMS Microbiol Lett. 2019 May 1;366(9). pii: fnz105. doi: 10.1093/femsle/fnz105.

PMID:
31077282
23.

Expanding the CRISPR Landscape on a cas by cas Basis.

Barrangou R.

CRISPR J. 2018 Oct;1:303. doi: 10.1089/crispr.2018.29035.rba. No abstract available.

PMID:
31021268
24.

MasterChef at Work: An Interview with Rodolphe Barrangou.

Davies K, Barrangou R.

CRISPR J. 2018 Jun;1:219-222. doi: 10.1089/crispr.2018.29015.int. No abstract available.

PMID:
31021261
25.

Enabling the Rise of a CRISPR World.

LaManna CM, Barrangou R.

CRISPR J. 2018 Jun;1:205-208. doi: 10.1089/crispr.2018.0022.

26.

The Democratization of CRISPR.

Barrangou R.

CRISPR J. 2018 Jun;1:203-204. doi: 10.1089/crispr.2018.29019.rba. No abstract available.

PMID:
31021253
27.

CRISPR Crossroads for Genome Editing.

Barrangou R.

CRISPR J. 2018 Dec;1:349-350. doi: 10.1089/crispr.2018.29040.rba. No abstract available.

PMID:
31021237
28.

CRISPR on the Move in 2019.

Barrangou R.

CRISPR J. 2019 Feb;2:1-2. doi: 10.1089/crispr.2019.29043.rba. No abstract available.

PMID:
31021232
29.

Pomp and Circumstance: Making the Case for CRISPR.

Curchoe CL, Barrangou R.

CRISPR J. 2018 Aug;1:253-254. doi: 10.1089/crispr.2018.29030.oxf. No abstract available.

PMID:
31021221
30.

CRISPR Craziness: A Response to the EU Court Ruling.

Barrangou R.

CRISPR J. 2018 Aug;1:251-252. doi: 10.1089/crispr.2018.29025.edi. No abstract available.

PMID:
31021214
31.

Cultivating CRISPR.

Barrangou R.

CRISPR J. 2018 Apr;1:99-100. doi: 10.1089/crispr.2018.29011.rba. No abstract available.

PMID:
31021202
32.

CRISPRdisco: An Automated Pipeline for the Discovery and Analysis of CRISPR-Cas Systems.

Crawley AB, Henriksen JR, Barrangou R.

CRISPR J. 2018 Apr;1:171-181. doi: 10.1089/crispr.2017.0022. Epub 2018 Apr 9.

33.

CRISPR-Directed Microbiome Manipulation across the Food Supply Chain.

Barrangou R, Notebaart RA.

Trends Microbiol. 2019 Jun;27(6):489-496. doi: 10.1016/j.tim.2019.03.006. Epub 2019 Apr 16. Review.

PMID:
31003873
34.

Time To Let CRISPR B.E.?

Barrangou R.

CRISPR J. 2019 Apr;2:67. doi: 10.1089/crispr.2019.29055.rdb. No abstract available.

PMID:
30998099
35.

Applications of CRISPR Technologies Across the Food Supply Chain.

Brandt K, Barrangou R.

Annu Rev Food Sci Technol. 2019 Mar 25;10:133-150. doi: 10.1146/annurev-food-032818-121204.

PMID:
30908954
36.

Recombination between phages and CRISPR-cas loci facilitates horizontal gene transfer in staphylococci.

Varble A, Meaden S, Barrangou R, Westra ER, Marraffini LA.

Nat Microbiol. 2019 Jun;4(6):956-963. doi: 10.1038/s41564-019-0400-2. Epub 2019 Mar 18.

37.

Bile salt hydrolases: Gatekeepers of bile acid metabolism and host-microbiome crosstalk in the gastrointestinal tract.

Foley MH, O'Flaherty S, Barrangou R, Theriot CM.

PLoS Pathog. 2019 Mar 7;15(3):e1007581. doi: 10.1371/journal.ppat.1007581. eCollection 2019 Mar. No abstract available.

38.

Predicting and visualizing features of CRISPR-Cas systems.

Nethery MA, Barrangou R.

Methods Enzymol. 2019;616:1-25. doi: 10.1016/bs.mie.2018.10.016. Epub 2018 Dec 19.

PMID:
30691639
39.

Harnessing CRISPR-Cas systems for precision engineering of designer probiotic lactobacilli.

Goh YJ, Barrangou R.

Curr Opin Biotechnol. 2019 Apr;56:163-171. doi: 10.1016/j.copbio.2018.11.009. Epub 2018 Dec 11. Review.

PMID:
30530241
40.

Engineering Components of the Lactobacillus S-Layer for Biotherapeutic Applications.

Klotz C, Barrangou R.

Front Microbiol. 2018 Oct 2;9:2264. doi: 10.3389/fmicb.2018.02264. eCollection 2018. Review.

41.

Transcriptional and Functional Analysis of Bifidobacterium animalis subsp. lactis Exposure to Tetracycline.

Morovic W, Roos P, Zabel B, Hidalgo-Cantabrana C, Kiefer A, Barrangou R.

Appl Environ Microbiol. 2018 Nov 15;84(23). pii: e01999-18. doi: 10.1128/AEM.01999-18. Print 2018 Dec 1.

42.

Characterization and Repurposing of Type I and Type II CRISPR-Cas Systems in Bacteria.

Hidalgo-Cantabrana C, Goh YJ, Barrangou R.

J Mol Biol. 2019 Jan 4;431(1):21-33. doi: 10.1016/j.jmb.2018.09.013. Epub 2018 Sep 24. Review.

PMID:
30261168
43.

Insights into the Human Virome Using CRISPR Spacers from Microbiomes.

Hidalgo-Cantabrana C, Sanozky-Dawes R, Barrangou R.

Viruses. 2018 Sep 7;10(9). pii: E479. doi: 10.3390/v10090479. Review.

44.

Conserved Genome Organization and Core Transcriptome of the Lactobacillus acidophilus Complex.

Crawley AB, Barrangou R.

Front Microbiol. 2018 Aug 13;9:1834. doi: 10.3389/fmicb.2018.01834. eCollection 2018.

45.

CRISPR Visualizer: rapid identification and visualization of CRISPR loci via an automated high-throughput processing pipeline.

Nethery MA, Barrangou R.

RNA Biol. 2019 Apr;16(4):577-584. doi: 10.1080/15476286.2018.1493332. Epub 2018 Aug 21.

46.

Comparative genomics and evolution of trans-activating RNAs in Class 2 CRISPR-Cas systems.

Faure G, Shmakov SA, Makarova KS, Wolf YI, Crawley AB, Barrangou R, Koonin EV.

RNA Biol. 2019 Apr;16(4):435-448. doi: 10.1080/15476286.2018.1493331. Epub 2018 Aug 14.

47.

Characterizing the activity of abundant, diverse and active CRISPR-Cas systems in lactobacilli.

Crawley AB, Henriksen ED, Stout E, Brandt K, Barrangou R.

Sci Rep. 2018 Aug 1;8(1):11544. doi: 10.1038/s41598-018-29746-3.

48.

Deletion-based escape of CRISPR-Cas9 targeting in Lactobacillus gasseri.

Stout EA, Sanozky-Dawes R, Goh YJ, Crawley AB, Klaenhammer TR, Barrangou R.

Microbiology. 2018 Sep;164(9):1098-1111. doi: 10.1099/mic.0.000689. Epub 2018 Jul 19.

PMID:
30024364
49.

Using glycolysis enzyme sequences to inform Lactobacillus phylogeny.

Brandt K, Barrangou R.

Microb Genom. 2018 Jun;4(6). doi: 10.1099/mgen.0.000187. Epub 2018 Jun 22.

50.

The Lactobacillus Bile Salt Hydrolase Repertoire Reveals Niche-Specific Adaptation.

O'Flaherty S, Briner Crawley A, Theriot CM, Barrangou R.

mSphere. 2018 May 30;3(3). pii: e00140-18. doi: 10.1128/mSphere.00140-18. Print 2018 Jun 27.

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