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Cell Type Purification by Single-Cell Transcriptome-Trained Sorting.

Baron CS, Barve A, Muraro MJ, van der Linden R, Dharmadhikari G, Lyubimova A, de Koning EJP, van Oudenaarden A.

Cell. 2019 Oct 3;179(2):527-542.e19. doi: 10.1016/j.cell.2019.08.006.


Stimulation of P2Y11 receptor protects human cardiomyocytes against Hypoxia/Reoxygenation injury and involves PKCε signaling pathway.

Benoist L, Chadet S, Genet T, Lefort C, Heraud A, Danila MD, Muntean DM, Baron C, Angoulvant D, Babuty D, Bourguignon T, Ivanes F.

Sci Rep. 2019 Aug 12;9(1):11613. doi: 10.1038/s41598-019-48006-6.


Prokineticin 1 (PROK1) is a new biomarker of human oocyte competence: expression and hormonal regulation throughout late folliculogenesis.

Alfaidy N, Baron C, Antoine Y, Reynaud D, Traboulsi W, Gueniffey A, Lamotte A, Melloul E, Dunand C, Villaret L, Bessonnat J, Mauroy C, Boueihl T, Coutton C, Martinez G, Hamamah S, Hoffmann P, Hennebicq S, Brouillet S.

Biol Reprod. 2019 Jul 5. pii: ioz114. doi: 10.1093/biolre/ioz114. [Epub ahead of print]


Selective bacterial degradation of the extracellular matrix attaching the gingiva to the tooth.

Fouillen A, Grenier D, Barbeau J, Baron C, Moffatt P, Nanci A.

Eur J Oral Sci. 2019 Aug;127(4):313-322. doi: 10.1111/eos.12623. Epub 2019 Jun 22.


Banding-free balanced SSFP cardiac cine using frequency modulation and phase cycle redundancy.

Datta A, Nishimura DG, Baron CA.

Magn Reson Med. 2019 Nov;82(5):1604-1616. doi: 10.1002/mrm.27815. Epub 2019 Jun 22.


The association between renal resistive index and premature mortality after kidney transplantation is modified by pre-transplant diabetes status: a cohort study.

de Freminville JB, Vernier LM, Roumy J, Patat F, Gatault P, Sautenet B, Bailly E, Chevallier E, Barbet C, Longuet H, Merieau E, Baron C, Buchler M, Halimi JM.

Nephrol Dial Transplant. 2019 Apr 26. pii: gfz067. doi: 10.1093/ndt/gfz067. [Epub ahead of print]


Fragment-based screening identifies inhibitors of ATPase activity and of hexamer formation of Cagα from the Helicobacter pylori type IV secretion system.

Arya T, Oudouhou F, Casu B, Bessette B, Sygusch J, Baron C.

Sci Rep. 2019 Apr 24;9(1):6474. doi: 10.1038/s41598-019-42876-6.


Increased risk of rejection after basiliximab induction in sensitized kidney transplant recipients without pre-existing donor-specific antibodies - a retrospective study.

Goumard A, Sautenet B, Bailly E, Miquelestorena-Standley E, Proust B, Longuet H, Binet L, Baron C, Halimi JM, Büchler M, Gatault P.

Transpl Int. 2019 Aug;32(8):820-830. doi: 10.1111/tri.13428. Epub 2019 Apr 12.


Impact on renal resistive index of diabetes in renal transplant donors and recipients: A retrospective analysis of 1827 kidney transplant recipients.

de Freminville JB, Vernier LM, Roumy J, Patat F, Gatault P, Sautenet B, Bailly E, Chevallier E, Barbet C, Longuet H, Merieau E, Baron C, Buchler M, Halimi JM.

J Clin Hypertens (Greenwich). 2019 Mar;21(3):382-389. doi: 10.1111/jch.13492. Epub 2019 Feb 14.


Estimation of the elastic modulus of child cortical bone specimens via microindentation.

Semaan M, Karam E, Baron C, Pithioux M.

Connect Tissue Res. 2019 Jul;60(4):399-405. doi: 10.1080/03008207.2019.1570170. Epub 2019 Feb 5.


Lgr5 Does Not Vary Throughout the Menstrual Cycle in Endometriotic Human Eutopic Endometrium.

Vallvé-Juanico J, Barón C, Suárez-Salvador E, Castellví J, Ballesteros A, Gil-Moreno A, Santamaria X.

Int J Mol Sci. 2018 Dec 21;20(1). pii: E22. doi: 10.3390/ijms20010022.


Engineering two species of yeast as cell factories for 2'-fucosyllactose.

Hollands K, Baron CM, Gibson KJ, Kelly KJ, Krasley EA, Laffend LA, Lauchli RM, Maggio-Hall LA, Nelson MJ, Prasad JC, Ren Y, Rice BA, Rice GH, Rothman SC.

Metab Eng. 2019 Mar;52:232-242. doi: 10.1016/j.ymben.2018.12.005. Epub 2018 Dec 14.


[Analysis of the first test of ASC-US smears by general practitioners of the Maine-et-Loire in 2014.]

Theurier L, Tessier Cazeneuve C, Le Duc-Banaszuk AS, Baron C, de Casabianca C.

Sante Publique. 2018 July August;30(4):499-505. doi: 10.3917/spub.185.0499. French.


Whole-heart coronary MR angiography using a 3D cones phyllotaxis trajectory.

Malavé MO, Baron CA, Addy NO, Cheng JY, Yang PC, Hu BS, Nishimura DG.

Magn Reson Med. 2019 Feb;81(2):1092-1103. doi: 10.1002/mrm.27475. Epub 2018 Oct 29.


Assessment of elastic coefficients of child cortical bone using resonant ultrasound spectroscopy.

Semaan M, Mora P, Bernard S, Launay F, Payan C, Lasaygues P, Pithioux M, Baron C.

J Mech Behav Biomed Mater. 2019 Feb;90:40-44. doi: 10.1016/j.jmbbm.2018.09.044. Epub 2018 Oct 2.


Prevalence of dental anomalies in French orthodontic patients: A retrospective study.

Baron C, Houchmand-Cuny M, Enkel B, Lopez-Cazaux S.

Arch Pediatr. 2018 Oct;25(7):426-430. doi: 10.1016/j.arcped.2018.07.002. Epub 2018 Sep 22.


Bases moléculaires de l’infection de plantes par Agrobacterium tumefaciens via un système de sécrétion de type IV 1.

Mary C, Baron C.

Biochem Cell Biol. 2019 Jun;97(3):215-223. doi: 10.1139/bcb-2018-0160. Epub 2018 Aug 24. Review. French.


Stimulation of P2Y11 receptor modulates cardiac fibroblasts secretome toward immunomodulatory and protective roles after Hypoxia/Reoxygenation injury.

Lefort C, Benoist L, Chadet S, Piollet M, Heraud A, Babuty D, Baron C, Ivanes F, Angoulvant D.

J Mol Cell Cardiol. 2018 Aug;121:212-222. doi: 10.1016/j.yjmcc.2018.07.245. Epub 2018 Jul 20.


Interaction via the N terminus of the type IV secretion system (T4SS) protein VirB6 with VirB10 is required for VirB2 and VirB5 incorporation into T-pili and for T4SS function.

Mary C, Fouillen A, Bessette B, Nanci A, Baron C.

J Biol Chem. 2018 Aug 31;293(35):13415-13426. doi: 10.1074/jbc.RA118.002751. Epub 2018 Jul 5.


Single-cell transcriptomics reveal the dynamic of haematopoietic stem cell production in the aorta.

Baron CS, Kester L, Klaus A, Boisset JC, Thambyrajah R, Yvernogeau L, Kouskoff V, Lacaud G, van Oudenaarden A, Robin C.

Nat Commun. 2018 Jun 28;9(1):2517. doi: 10.1038/s41467-018-04893-3.


VirB8 homolog TraE from plasmid pKM101 forms a hexameric ring structure and interacts with the VirB6 homolog TraD.

Casu B, Mary C, Sverzhinsky A, Fouillen A, Nanci A, Baron C.

Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):5950-5955. doi: 10.1073/pnas.1802501115. Epub 2018 May 21.


Multi-year linkage and association mapping confirm the high number of genomic regions involved in oilseed rape quantitative resistance to blackleg.

Kumar V, Paillard S, Fopa-Fomeju B, Falentin C, Deniot G, Baron C, Vallée P, Manzanares-Dauleux MJ, Delourme R.

Theor Appl Genet. 2018 Aug;131(8):1627-1643. doi: 10.1007/s00122-018-3103-9. Epub 2018 May 4.


Peripheral nervous system involvement in Leber's hereditary optic neuropathy.

Ciron J, Baron C, Boissonnot M, Neau JP, Magdelaine C, Vallat JM, Mathis S.

J Neurol Sci. 2018 May 15;388:94-96. doi: 10.1016/j.jns.2018.03.002. Epub 2018 Mar 2. No abstract available.


Whole-organism clone tracing using single-cell sequencing.

Alemany A, Florescu M, Baron CS, Peterson-Maduro J, van Oudenaarden A.

Nature. 2018 Apr 5;556(7699):108-112. doi: 10.1038/nature25969. Epub 2018 Mar 28.


Dicer-2-Dependent Generation of Viral DNA from Defective Genomes of RNA Viruses Modulates Antiviral Immunity in Insects.

Poirier EZ, Goic B, Tomé-Poderti L, Frangeul L, Boussier J, Gausson V, Blanc H, Vallet T, Loyd H, Levi LI, Lanciano S, Baron C, Merkling SH, Lambrechts L, Mirouze M, Carpenter S, Vignuzzi M, Saleh MC.

Cell Host Microbe. 2018 Mar 14;23(3):353-365.e8. doi: 10.1016/j.chom.2018.02.001. Epub 2018 Mar 1.


CMV-infected kidney grafts drive the expansion of blood-borne CMV-specific T cells restricted by shared class I HLA molecules via presentation on donor cells.

Gatault P, Al-Hajj S, Noble J, Chevallier E, Piollet M, Forconi C, Gaudy-Graffin C, Thibault G, Miquelestorena-Standley E, Halimi JM, Büchler M, Lemoine R, Baron C.

Am J Transplant. 2018 Aug;18(8):1904-1913. doi: 10.1111/ajt.14672. Epub 2018 Mar 3.


Providing Effective Speech-Language Pathology Group Treatment in the Comprehensive Inpatient Rehabilitation Setting.

Baron C, Holcombe M, van der Stelt C.

Semin Speech Lang. 2018 Feb;39(1):53-65. doi: 10.1055/s-0037-1608856. Epub 2018 Jan 22. Review.


Effects of dietary supplementation with a mixed blueberry and grape extract on working memory in aged beagle dogs.

Fragua V, Lepoudère A, Leray V, Baron C, Araujo JA, Nguyen P, Milgram NW.

J Nutr Sci. 2017 Jul 12;6:e35. doi: 10.1017/jns.2017.33. eCollection 2017.


Fragment-based screening identifies novel targets for inhibitors of conjugative transfer of antimicrobial resistance by plasmid pKM101.

Casu B, Arya T, Bessette B, Baron C.

Sci Rep. 2017 Nov 2;7(1):14907. doi: 10.1038/s41598-017-14953-1.


Mitigation of near-band balanced steady-state free precession through-plane flow artifacts using partial dephasing.

Datta A, Cheng JY, Hargreaves BA, Baron CA, Nishimura DG.

Magn Reson Med. 2018 Jun;79(6):2944-2953. doi: 10.1002/mrm.26957. Epub 2017 Oct 10.


Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations.

van den Brink SC, Sage F, Vértesy Á, Spanjaard B, Peterson-Maduro J, Baron CS, Robin C, van Oudenaarden A.

Nat Methods. 2017 Sep 29;14(10):935-936. doi: 10.1038/nmeth.4437. No abstract available.


Rapid compressed sensing reconstruction of 3D non-Cartesian MRI.

Baron CA, Dwork N, Pauly JM, Nishimura DG.

Magn Reson Med. 2018 May;79(5):2685-2692. doi: 10.1002/mrm.26928. Epub 2017 Sep 23.


The type IV secretion system core component VirB8 interacts via the β1-strand with VirB10.

Sharifahmadian M, Nlend IU, Lecoq L, Omichinski JG, Baron C.

FEBS Lett. 2017 Aug;591(16):2491-2500. doi: 10.1002/1873-3468.12770. Epub 2017 Aug 11.


Stiff, light, strong and ductile: nano-structured High Modulus Steel.

Springer H, Baron C, Szczepaniak A, Uhlenwinkel V, Raabe D.

Sci Rep. 2017 Jun 5;7(1):2757. doi: 10.1038/s41598-017-02861-3.


Properties of particle phases for metal-matrix-composite design.

Baron C, Springer H.

Data Brief. 2017 Apr 29;12:692-708. doi: 10.1016/j.dib.2017.04.038. eCollection 2017 Jun.


Retrospective analysis of skin complications related to bone-anchored hearing aid implant: association with surgical technique, quality of life, and audiological benefit.

Peñaranda D, Garcia JM, Aparicio ML, Montes F, Barón C, Jiménez RC, Peñaranda A.

Braz J Otorhinolaryngol. 2018 May - Jun;84(3):324-331. doi: 10.1016/j.bjorl.2017.03.012. Epub 2017 Apr 25.


Interactions of AMTN, ODAM and SCPPPQ1 proteins of a specialized basal lamina that attaches epithelial cells to tooth mineral.

Fouillen A, Dos Santos Neves J, Mary C, Castonguay JD, Moffatt P, Baron C, Nanci A.

Sci Rep. 2017 Apr 24;7:46683. doi: 10.1038/srep46683.


Analysis of Novel Interactions between Components of the Selenocysteine Biosynthesis Pathway, SEPHS1, SEPHS2, SEPSECS, and SECp43.

Oudouhou F, Casu B, Dopgwa Puemi AS, Sygusch J, Baron C.

Biochemistry. 2017 May 2;56(17):2261-2270. doi: 10.1021/acs.biochem.6b01116. Epub 2017 Apr 20.


Monomer-to-dimer transition of Brucella suis type IV secretion system component VirB8 induces conformational changes.

Sharifahmadian M, Arya T, Bessette B, Lecoq L, Ruediger E, Omichinski JG, Baron C.

FEBS J. 2017 Apr;284(8):1218-1232. doi: 10.1111/febs.14049. Epub 2017 Mar 23.


Specificity and mechanism of mandelamide hydrolase catalysis.

Adediran SA, Wang PF, Shilabin AG, Baron CA, McLeish MJ, Pratt RF.

Arch Biochem Biophys. 2017 Mar 15;618:23-31. doi: 10.1016/ Epub 2017 Jan 24.


Type IV Secretion in Agrobacterium tumefaciens and Development of Specific Inhibitors.

Sharifahmadian M, Baron C.

Curr Top Microbiol Immunol. 2017;413:169-186. doi: 10.1007/978-3-319-75241-9_7.


Cag-delta (Cag3) protein from the Helicobacter pylori 26695 cag type IV secretion system forms ring-like supramolecular assemblies.

Smart J, Fouillen A, Casu B, Nanci A, Baron C.

FEMS Microbiol Lett. 2017 Jan;364(1). pii: fnw280. doi: 10.1093/femsle/fnw280. Epub 2016 Dec 15.


Polymorphism in programmed cell death 1 gene is strongly associated with lung and kidney allograft survival in recipients from CMV-positive donors.

Forconi C, Gatault P, Miquelestorena-Standley E, Noble J, Al-Hajj S, Guillemain R, Stern M, Hoffmann T, Prat L, Suberbielle C, Masson E, Cesbron-Gautier A, Gaudy-Graffin C, Goudeau A, Thibault G, Ivanes F, Guibon R, Kazma I, Lebranchu Y, Büchler M, Magnan A, Halimi JM, Baron C.

J Heart Lung Transplant. 2017 Mar;36(3):315-324. doi: 10.1016/j.healun.2016.08.014. Epub 2016 Aug 26.


Structural Analysis and Inhibition of TraE from the pKM101 Type IV Secretion System.

Casu B, Smart J, Hancock MA, Smith M, Sygusch J, Baron C.

J Biol Chem. 2016 Nov 4;291(45):23817-23829. Epub 2016 Sep 15.


Genetic basis of nitrogen use efficiency and yield stability across environments in winter rapeseed.

Bouchet AS, Laperche A, Bissuel-Belaygue C, Baron C, Morice J, Rousseau-Gueutin M, Dheu JE, George P, Pinochet X, Foubert T, Maes O, Dugué D, Guinot F, Nesi N.

BMC Genet. 2016 Sep 15;17(1):131. doi: 10.1186/s12863-016-0432-z.


Long-term outcome of basilar stenosis in Erdheim-Chester disease: A case report.

Mathis S, Godenèche G, Haroche J, Milin S, Julian A, Berthomet A, Baron C, Palazzo P, Neau JP.

Medicine (Baltimore). 2016 Sep;95(36):e4813. doi: 10.1097/MD.0000000000004813. Review.


B0 mapping using rewinding trajectories (BMART).

Baron CA, Nishimura DG.

Magn Reson Med. 2017 Aug;78(2):664-669. doi: 10.1002/mrm.26391. Epub 2016 Aug 24.


Quantification of cefazolin in serum and adipose tissue by ultra high performance liquid chromatography-Tandem mass spectrometry (UHPLC-MS/MS): application to a pilot study of obese women undergoing cesarean delivery.

Lillico R, Sayre CL, Sitar DS, Davies NM, Baron CM, Lakowski TM.

J Chromatogr B Analyt Technol Biomed Life Sci. 2016 Sep 15;1031:94-98. doi: 10.1016/j.jchromb.2016.07.032. Epub 2016 Jul 18.


Pore network microarchitecture influences human cortical bone elasticity during growth and aging.

Bala Y, Lefèvre E, Roux JP, Baron C, Lasaygues P, Pithioux M, Kaftandjian V, Follet H.

J Mech Behav Biomed Mater. 2016 Oct;63:164-173. doi: 10.1016/j.jmbbm.2016.05.018. Epub 2016 Jun 22.


Genome-Wide Association Study of Acute Renal Graft Rejection.

Ghisdal L, Baron C, Lebranchu Y, Viklický O, Konarikova A, Naesens M, Kuypers D, Dinic M, Alamartine E, Touchard G, Antoine T, Essig M, Rerolle JP, Merville P, Taupin JL, Le Meur Y, Grall-Jezequel A, Glowacki F, Noël C, Legendre C, Anglicheau D, Broeders N, Coppieters W, Docampo E, Georges M, Ajarchouh Z, Massart A, Racapé J, Abramowicz D, Abramowicz M.

Am J Transplant. 2017 Jan;17(1):201-209. doi: 10.1111/ajt.13912. Epub 2016 Jul 22.

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