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Items: 16

1.

Complex patterns of hybridization and introgression across evolutionary timescales in Mexican whiptail lizards (Aspidoscelis).

Barley AJ, Nieto-Montes de Oca A, Reeder TW, Manríquez-Morán NL, Arenas Monroy JC, Hernández-Gallegos O, Thomson RC.

Mol Phylogenet Evol. 2019 Mar;132:284-295. doi: 10.1016/j.ympev.2018.12.016. Epub 2018 Dec 15.

PMID:
30562610
2.

Phylogeography of a widespread lizard complex reflects patterns of both geographic and ecological isolation.

Gray LN, Barley AJ, Poe S, Thomson RC, Nieto-Montes de Oca A, Wang IJ.

Mol Ecol. 2019 Feb;28(3):644-657. doi: 10.1111/mec.14970. Epub 2019 Feb 13.

PMID:
30525264
3.

Variation Across Mitochondrial Gene Trees Provides Evidence for Systematic Error: How Much Gene Tree Variation Is Biological?

Richards EJ, Brown JM, Barley AJ, Chong RA, Thomson RC.

Syst Biol. 2018 Sep 1;67(5):847-860. doi: 10.1093/sysbio/syy013.

PMID:
29471536
4.

Impact of Model Violations on the Inference of Species Boundaries Under the Multispecies Coalescent.

Barley AJ, Brown JM, Thomson RC.

Syst Biol. 2018 Mar 1;67(2):269-284. doi: 10.1093/sysbio/syx073.

PMID:
28945903
5.

Corrigendum to "Phylogenomics and species delimitation in the knob-scaled lizards of the genus Xenosaurus (Squamata: Xenosauridae) using ddRADseq data reveal a substantial underestimation of diversity" [Mol. Phylogen. Evol. 106 (2017) 241-253].

Nieto-Montes de Oca A, Barley AJ, Meza-Lázaro RN, García-Vázquez UO, Zamora-Abrego JG, Thomson RC, Leaché AD.

Mol Phylogenet Evol. 2017 Feb;107:644. doi: 10.1016/j.ympev.2016.11.002. Epub 2016 Nov 2. No abstract available.

PMID:
27816561
6.

Phylogenomics and species delimitation in the knob-scaled lizards of the genus Xenosaurus (Squamata: Xenosauridae) using ddRADseq data reveal a substantial underestimation of diversity.

Nieto-Montes de Oca A, Barley AJ, Meza-Lázaro RN, García-Vázquez UO, Zamora-Abrego JG, Thomson RC, Leaché AD.

Mol Phylogenet Evol. 2017 Jan;106:241-253. doi: 10.1016/j.ympev.2016.09.001. Epub 2016 Oct 5. Erratum in: Mol Phylogenet Evol. 2017 Feb;107:644.

PMID:
27720785
7.

Assessing the performance of DNA barcoding using posterior predictive simulations.

Barley AJ, Thomson RC.

Mol Ecol. 2016 May;25(9):1944-57. doi: 10.1111/mec.13590. Epub 2016 Mar 28.

PMID:
26915049
8.

An addition to the endemic Indian radiation of Eutropis: Phylogenetic position of Eutropis dissimilis Hallowell (Squamata: Scincidae).

Datta-Roy A, Deepak V, Sidharthan C, Barley AJ, Karanth KP.

Zootaxa. 2015 Oct 1;4027(1):145-50. doi: 10.11646/zootaxa.4027.1.9.

PMID:
26624173
9.

Sun skink landscape genomics: assessing the roles of micro-evolutionary processes in shaping genetic and phenotypic diversity across a heterogeneous and fragmented landscape.

Barley AJ, Monnahan PJ, Thomson RC, Grismer LL, Brown RM.

Mol Ecol. 2015 Apr;24(8):1696-712. doi: 10.1111/mec.13151. Epub 2015 Apr 6.

PMID:
25763872
10.

Conservation genetics of the Philippine tarsier: cryptic genetic variation restructures conservation priorities for an island archipelago primate.

Brown RM, Weghorst JA, Olson KV, Duya MR, Barley AJ, Duya MV, Shekelle M, Neri-Arboleda I, Esselstyn JA, Dominy NJ, Ong PS, Moritz GL, Luczon A, Diesmos ML, Diesmos AC, Siler CD.

PLoS One. 2014 Aug 19;9(8):e104340. doi: 10.1371/journal.pone.0104340. eCollection 2014.

11.

Cryptic species diversity in marsupial frogs (Anura: Hemiphractidae: Gastrotheca) in the Andes of northern Peru.

Duellman WE, Barley AJ, Venegas PJ.

Zootaxa. 2014 Feb 25;3768:159-77. doi: 10.11646/zootaxa.3768.2.4.

PMID:
24871173
12.

Archipelago colonization by ecologically dissimilar amphibians: evaluating the expectation of common evolutionary history of geographical diffusion in co-distributed rainforest tree frogs in islands of Southeast Asia.

Gonzalez P, Su YC, Siler CD, Barley AJ, Sanguila MB, Diesmos AC, Brown RM.

Mol Phylogenet Evol. 2014 Mar;72:35-41. doi: 10.1016/j.ympev.2013.12.006. Epub 2014 Jan 3.

PMID:
24389467
13.

The challenge of species delimitation at the extremes: diversification without morphological change in philippine sun skinks.

Barley AJ, White J, Diesmos AC, Brown RM.

Evolution. 2013 Dec;67(12):3556-72. doi: 10.1111/evo.12219. Epub 2013 Aug 26.

PMID:
24299408
14.

Fourteen nuclear genes provide phylogenetic resolution for difficult nodes in the turtle tree of life.

Barley AJ, Spinks PQ, Thomson RC, Shaffer HB.

Mol Phylogenet Evol. 2010 Jun;55(3):1189-94. doi: 10.1016/j.ympev.2009.11.005. Epub 2009 Nov 12.

PMID:
19913628
15.
16.

Hymenolepis diminuta: glucose and glycogen gradients in the adult tapeworm.

Pappas PW, Barley AJ, Wardrop SM.

Exp Parasitol. 1999 Apr;91(4):315-26.

PMID:
10092475

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