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Machine learning to refine decision making within a syndromic surveillance service.

Lake IR, Colón-González FJ, Barker GC, Morbey RA, Smith GE, Elliot AJ.

BMC Public Health. 2019 May 14;19(1):559. doi: 10.1186/s12889-019-6916-9.


A comparison of ergosterol and PLFA methods for monitoring the growth of ligninolytic fungi during wheat straw solid state cultivation.

Nurika I, Eastwood DC, Barker GC.

J Microbiol Methods. 2018 May;148:49-54. doi: 10.1016/j.mimet.2018.03.006. Epub 2018 Mar 23.


Climate Change, Foodborne Pathogens and Illness in Higher-Income Countries.

Lake IR, Barker GC.

Curr Environ Health Rep. 2018 Mar;5(1):187-196. doi: 10.1007/s40572-018-0189-9. Review.


Genome-Wide Linkage and Association Mapping of Halo Blight Resistance in Common Bean to Race 6 of the Globally Important Bacterial Pathogen.

Tock AJ, Fourie D, Walley PG, Holub EB, Soler A, Cichy KA, Pastor-Corrales MA, Song Q, Porch TG, Hart JP, Vasconcellos RCC, Vicente JG, Barker GC, Miklas PN.

Front Plant Sci. 2017 Jul 7;8:1170. doi: 10.3389/fpls.2017.01170. eCollection 2017.


Time Series Analysis of the Bacillus subtilis Sporulation Network Reveals Low Dimensional Chaotic Dynamics.

Lecca P, Mura I, Re A, Barker GC, Ihekwaba AE.

Front Microbiol. 2016 Nov 7;7:1760. eCollection 2016.


An Integrative Approach to Computational Modelling of the Gene Regulatory Network Controlling Clostridium botulinum Type A1 Toxin Production.

Ihekwaba AE, Mura I, Walshaw J, Peck MW, Barker GC.

PLoS Comput Biol. 2016 Nov 17;12(11):e1005205. doi: 10.1371/journal.pcbi.1005205. eCollection 2016 Nov.


The pangenome of an agronomically important crop plant Brassica oleracea.

Golicz AA, Bayer PE, Barker GC, Edger PP, Kim H, Martinez PA, Chan CK, Severn-Ellis A, McCombie WR, Parkin IA, Paterson AH, Pires JC, Sharpe AG, Tang H, Teakle GR, Town CD, Batley J, Edwards D.

Nat Commun. 2016 Nov 11;7:13390. doi: 10.1038/ncomms13390.


Systematic Assessment of Nonproteolytic Clostridium botulinum Spores for Heat Resistance.

Wachnicka E, Stringer SC, Barker GC, Peck MW.

Appl Environ Microbiol. 2016 Sep 16;82(19):6019-29. doi: 10.1128/AEM.01737-16. Print 2016 Oct 1. Review.


Trait to gene analysis reveals that allelic variation in three genes determines seed vigour.

Morris K, Barker GC, Walley PG, Lynn JR, Finch-Savage WE.

New Phytol. 2016 Dec;212(4):964-976. doi: 10.1111/nph.14102. Epub 2016 Jul 19.


Quantification of Nonproteolytic Clostridium botulinum Spore Loads in Food Materials.

Barker GC, Malakar PK, Plowman J, Peck MW.

Appl Environ Microbiol. 2016 Jan 4;82(6):1675-85. doi: 10.1128/AEM.03630-15.


The pattern of growth observed for Clostridium botulinum type A1 strain ATCC 19397 is influenced by nutritional status and quorum sensing: a modelling perspective.

Ihekwaba AE, Mura I, Peck MW, Barker GC.

Pathog Dis. 2015 Dec;73(9):ftv084. doi: 10.1093/femspd/ftv084. Epub 2015 Oct 7.


New Elements To Consider When Modeling the Hazards Associated with Botulinum Neurotoxin in Food.

Ihekwaba AE, Mura I, Malakar PK, Walshaw J, Peck MW, Barker GC.

J Bacteriol. 2015 Sep 8;198(2):204-11. doi: 10.1128/JB.00630-15. Print 2016 Jan 15. Review.


Status and future of Quantitative Microbiological Risk Assessment in China.

Dong QL, Barker GC, Gorris LG, Tian MS, Song XY, Malakar PK.

Trends Food Sci Technol. 2015 Mar;42(1):70-80. Review.


First step in using molecular data for microbial food safety risk assessment; hazard identification of Escherichia coli O157:H7 by coupling genomic data with in vitro adherence to human epithelial cells.

Pielaat A, Boer MP, Wijnands LM, van Hoek AH, Bouw E, Barker GC, Teunis PF, Aarts HJ, Franz E.

Int J Food Microbiol. 2015 Nov 20;213:130-8. doi: 10.1016/j.ijfoodmicro.2015.04.009. Epub 2015 Apr 10.


Shaking-induced crystallization of dense sphere packings.

Shinde DP, Mehta A, Barker GC.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Feb;89(2):022204. Epub 2014 Feb 27.


Computational modelling and analysis of the molecular network regulating sporulation initiation in Bacillus subtilis.

Ihekwaba AE, Mura I, Barker GC.

BMC Syst Biol. 2014 Oct 24;8:119. doi: 10.1186/s12918-014-0119-x.


Staphylococcus aureus reservoirs during traditional Austrian raw milk cheese production.

Walcher G, Gonano M, Kümmel J, Barker GC, Lebl K, Bereuter O, Ehling-Schulz M, Wagner M, Stessl B.

J Dairy Res. 2014 Nov;81(4):462-70. doi: 10.1017/S0022029914000417. Epub 2014 Sep 29.


Comparative cytotoxicity of artemisinin and cisplatin and their interactions with chlorogenic acids in MCF7 breast cancer cells.

Suberu JO, Romero-Canelón I, Sullivan N, Lapkin AA, Barker GC.

ChemMedChem. 2014 Dec;9(12):2791-7. doi: 10.1002/cmdc.201402285. Epub 2014 Sep 10.


Multiple copies of eukaryotic translation initiation factors in Brassica rapa facilitate redundancy, enabling diversification through variation in splicing and broad-spectrum virus resistance.

Nellist CF, Qian W, Jenner CE, Moore JD, Zhang S, Wang X, Briggs WH, Barker GC, Sun R, Walsh JA.

Plant J. 2014 Jan;77(2):261-8. doi: 10.1111/tpj.12389. Epub 2013 Dec 30.


Anti-plasmodial polyvalent interactions in Artemisia annua L. aqueous extract--possible synergistic and resistance mechanisms.

Suberu JO, Gorka AP, Jacobs L, Roepe PD, Sullivan N, Barker GC, Lapkin AA.

PLoS One. 2013 Nov 14;8(11):e80790. doi: 10.1371/journal.pone.0080790. eCollection 2013. Erratum in: PLoS One. 2013;8(11). doi:10.1371/annotation/57ae25b0-d2c8-444b-ab62-f047c5f3e01e.


Separated by a common language: awareness of term usage differences between languages and disciplines in biopreparedness.

Andersson MG, Tomuzia K, Löfström C, Appel B, Bano L, Keremidis H, Knutsson R, Leijon M, Lövgren SE, De Medici D, Menrath A, van Rotterdam BJ, Wisselink HJ, Barker GC.

Biosecur Bioterror. 2013 Sep;11 Suppl 1:S276-85. doi: 10.1089/bsp.2012.0083.


Social media and its dual use in biopreparedness: communication and visualization tools in an animal bioterrorism incident.

Sjöberg E, Barker GC, Landgren J, Griberg I, Skiby JE, Tubbin A, von Stapelmohr A, Härenstam M, Jansson M, Knutsson R.

Biosecur Bioterror. 2013 Sep;11 Suppl 1:S264-75. doi: 10.1089/bsp.2013.0014.


Analysis of research publications that relate to bioterrorism and risk assessment.

Barker GC.

Biosecur Bioterror. 2013 Sep;11 Suppl 1:S124-33. doi: 10.1089/bsp.2013.0019.


Genetic regulation of glucoraphanin accumulation in Beneforté broccoli.

Traka MH, Saha S, Huseby S, Kopriva S, Walley PG, Barker GC, Moore J, Mero G, van den Bosch F, Constant H, Kelly L, Schepers H, Boddupalli S, Mithen RF.

New Phytol. 2013 Jun;198(4):1085-95. doi: 10.1111/nph.12232. Epub 2013 Apr 8.


The formation of Staphylococcus aureus enterotoxin in food environments and advances in risk assessment.

Schelin J, Wallin-Carlquist N, Cohn MT, Lindqvist R, Barker GC, Rådström P.

Virulence. 2011 Nov-Dec;2(6):580-92. doi: 10.4161/viru.2.6.18122. Epub 2011 Nov 1. Review.


A risk assessment model for enterotoxigenic Staphylococcus aureus in pasteurized milk: a potential route to source-level inference.

Barker GC, Goméz-Tomé N.

Risk Anal. 2013 Feb;33(2):249-69. doi: 10.1111/j.1539-6924.2011.01667.x. Epub 2011 Sep 29.


Does gravity cause load-bearing bridges in colloidal and granular systems?

Jenkins MC, Haw MD, Barker GC, Poon WC, Egelhaaf SU.

Phys Rev Lett. 2011 Jul 15;107(3):038302. Epub 2011 Jul 15.


Quantitative risk assessment for hazards that arise from non-proteolytic Clostridium botulinum in minimally processed chilled dairy-based foods.

Malakar PK, Barker GC, Peck MW.

Food Microbiol. 2011 Apr;28(2):321-30. doi: 10.1016/ Epub 2010 Apr 14.


Development and application of a new method for specific and sensitive enumeration of spores of nonproteolytic Clostridium botulinum types B, E, and F in foods and food materials.

Peck MW, Plowman J, Aldus CF, Wyatt GM, Izurieta WP, Stringer SC, Barker GC.

Appl Environ Microbiol. 2010 Oct;76(19):6607-14. doi: 10.1128/AEM.01007-10. Epub 2010 Aug 13.


Turnip mosaic virus (TuMV) is able to use alleles of both eIF4E and eIF(iso)4E from multiple loci of the diploid Brassica rapa.

Jenner CE, Nellist CF, Barker GC, Walsh JA.

Mol Plant Microbe Interact. 2010 Nov;23(11):1498-505. doi: 10.1094/MPMI-05-10-0104.


Can a participatory approach contribute to food chain risk analysis?

Barker GC, Bayley C, Cassidy A, French S, Hart A, Malakar PK, Maule J, Petkov M, Shepherd R.

Risk Anal. 2010 May;30(5):766-81. doi: 10.1111/j.1539-6924.2010.01385.x. Epub 2010 Apr 8.


Strengths and weaknesses of Monte Carlo simulation models and Bayesian belief networks in microbial risk assessment.

Smid JH, Verloo D, Barker GC, Havelaar AH.

Int J Food Microbiol. 2010 May 30;139 Suppl 1:S57-63. doi: 10.1016/j.ijfoodmicro.2009.12.015. Epub 2009 Dec 28.


Estimating risk from small inocula by using population growth parameters.

Malakar PK, Barker GC.

Appl Environ Microbiol. 2009 Oct;75(19):6399-401. doi: 10.1128/AEM.00651-09. Epub 2009 Jul 31.


Estimating single-cell lag times via a Bayesian scheme.

Malakar PK, Barker GC.

Appl Environ Microbiol. 2008 Nov;74(22):7098-9. doi: 10.1128/AEM.01277-08. Epub 2008 Sep 19.


The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation.

Alix K, Joets J, Ryder CD, Moore J, Barker GC, Bailey JP, King GJ, Pat Heslop-Harrison JS.

Plant J. 2008 Dec;56(6):1030-44. doi: 10.1111/j.1365-313X.2008.03660.x. Epub 2008 Aug 21.


Meta-analysis of experimental data concerning antimicrobial resistance gene transfer rates during conjugation.

Hunter PR, Wilkinson DC, Catling LA, Barker GC.

Appl Environ Microbiol. 2008 Oct;74(19):6085-90. doi: 10.1128/AEM.01036-08. Epub 2008 Aug 15.


Heterogeneities in granular dynamics.

Mehta A, Barker GC, Luck JM.

Proc Natl Acad Sci U S A. 2008 Jun 17;105(24):8244-9. doi: 10.1073/pnas.0711733105. Epub 2008 Jun 9.


The reference genetic linkage map for the multinational Brassica rapa genome sequencing project.

Choi SR, Teakle GR, Plaha P, Kim JH, Allender CJ, Beynon E, Piao ZY, Soengas P, Han TH, King GJ, Barker GC, Hand P, Lydiate DJ, Batley J, Edwards D, Koo DH, Bang JW, Park BS, Lim YP.

Theor Appl Genet. 2007 Oct;115(6):777-92. Epub 2007 Jul 24.


Probabilistic representation of the exposure of consumers to Clostridium botulinum neurotoxin in a minimally processed potato product.

Barker GC, Malakar PK, Del Torre M, Stecchini ML, Peck MW.

Int J Food Microbiol. 2005 Apr 15;100(1-3):345-57. Epub 2004 Dec 15.


Germination and growth from spores: variability and uncertainty in the assessment of food borne hazards.

Barker GC, Malakar PK, Peck MW.

Int J Food Microbiol. 2005 Apr 15;100(1-3):67-76. Epub 2004 Nov 26.


Sedimentation in bidisperse and polydisperse colloids.

Watson AD, Barker GC, Robins MM.

J Colloid Interface Sci. 2005 Jun 1;286(1):176-86.


Relevance of microbial interactions to predictive microbiology.

Malakar PK, Barker GC, Zwietering MH, van't Riet K.

Int J Food Microbiol. 2003 Aug 1;84(3):263-72.


A retail and consumer phase model for exposure assessment of Bacillus cereus.

Nauta MJ, Litman S, Barker GC, Carlin F.

Int J Food Microbiol. 2003 Jun 15;83(2):205-18.


Sequence variation in the Trichuris trichiura beta-tubulin locus: implications for the development of benzimidazole resistance.

Bennett AB, Anderson TJ, Barker GC, Michael E, Bundy DA.

Int J Parasitol. 2002 Nov;32(12):1519-28.


Integration of the cytogenetic and genetic linkage maps of Brassica oleracea.

Howell EC, Barker GC, Jones GH, Kearsey MJ, King GJ, Kop EP, Ryder CD, Teakle GR, Vicente JG, Armstrong SJ.

Genetics. 2002 Jul;161(3):1225-34.


Microsatellite DNA: a tool for population genetic analysis.

Barker GC.

Trans R Soc Trop Med Hyg. 2002 Apr;96 Suppl 1:S21-4. Review.


Characterisation and modelling of oscillatory behaviour related to reuterin production by Lactobacillus reuteri.

Rasch M, Barker GC, Sachau K, Jakobsen M, Arneborg N.

Int J Food Microbiol. 2002 Mar;73(2-3):383-94.


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