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Prenatal exposure to glycol ethers and motor inhibition function evaluated by functional MRI at the age of 10 to 12 years in the PELAGIE mother-child cohort.

Binter AC, Bannier E, Simon G, Saint-Amour D, Ferré JC, Barillot C, Monfort C, Cordier S, Chevrier C, Pelé F.

Environ Int. 2019 Sep 10;133(Pt A):105163. doi: 10.1016/j.envint.2019.105163. [Epub ahead of print]


Changes in brain perfusion in successive arterial spin labeling MRI scans in neonates with hypoxic-ischemic encephalopathy.

Proisy M, Corouge I, Leghouy A, Nicolas A, Charon V, Mazille N, Leroux S, Bruneau B, Barillot C, Ferré JC.

Neuroimage Clin. 2019 Jul 16;24:101939. doi: 10.1016/j.nicl.2019.101939. [Epub ahead of print]


Joint assessment of brain and spinal cord motor tract damage in patients with early RRMS: predominant impact of spinal cord lesions on motor function.

Chouteau R, Combès B, Bannier E, Snoussi H, Ferré JC, Barillot C, Edan G, Sauleau P, Kerbrat A.

J Neurol. 2019 Sep;266(9):2294-2303. doi: 10.1007/s00415-019-09419-5. Epub 2019 Jun 7.


White matter abnormalities in depression: A categorical and phenotypic diffusion MRI study.

Coloigner J, Batail JM, Commowick O, Corouge I, Robert G, Barillot C, Drapier D.

Neuroimage Clin. 2019;22:101710. doi: 10.1016/j.nicl.2019.101710. Epub 2019 Feb 4.


Patch-based super-resolution of arterial spin labeling magnetic resonance images.

Meurée C, Maurel P, Ferré JC, Barillot C.

Neuroimage. 2019 Apr 1;189:85-94. doi: 10.1016/j.neuroimage.2019.01.004. Epub 2019 Jan 10.


Measurement of magnetization transfer ratio (MTR) from cervical spinal cord: Multicenter reproducibility and variability.

Combès B, Monteau L, Bannier E, Callot V, Labauge P, Ayrignac X, Carra Dallière C, Pelletier J, Maarouf A, de Seze J, Collongues N, Barillot C, Edan G, Ferré JC, Kerbrat A; EMISEP study group.

J Magn Reson Imaging. 2019 Jun;49(6):1777-1785. doi: 10.1002/jmri.26537. Epub 2018 Oct 22.


Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure.

Commowick O, Istace A, Kain M, Laurent B, Leray F, Simon M, Pop SC, Girard P, Améli R, Ferré JC, Kerbrat A, Tourdias T, Cervenansky F, Glatard T, Beaumont J, Doyle S, Forbes F, Knight J, Khademi A, Mahbod A, Wang C, McKinley R, Wagner F, Muschelli J, Sweeney E, Roura E, Lladó X, Santos MM, Santos WP, Silva-Filho AG, Tomas-Fernandez X, Urien H, Bloch I, Valverde S, Cabezas M, Vera-Olmos FJ, Malpica N, Guttmann C, Vukusic S, Edan G, Dojat M, Styner M, Warfield SK, Cotton F, Barillot C.

Sci Rep. 2018 Sep 12;8(1):13650. doi: 10.1038/s41598-018-31911-7.


Superior explicit memory despite severe developmental amnesia: In-depth case study and neural correlates.

Jonin PY, Besson G, La Joie R, Pariente J, Belliard S, Barillot C, Barbeau EJ.

Hippocampus. 2018 Dec;28(12):867-885. doi: 10.1002/hipo.23010. Epub 2018 Nov 6.


Focal and diffuse cervical spinal cord damage in patients with early relapsing-remitting MS: A multicentre magnetisation transfer ratio study.

Combès B, Kerbrat A, Ferré JC, Callot V, Maranzano J, Badji A, Le Page E, Labauge P, Ayrignac X, Carra Dallière C, de Champfleur NM, Pelletier J, Maarouf A, de Seze J, Collongues N, Brassat D, Durand-Dubief F, Barillot C, Bannier E, Edan G.

Mult Scler. 2019 Jul;25(8):1113-1123. doi: 10.1177/1352458518781999. Epub 2018 Jun 18.


Measurement of pediatric regional cerebral blood flow from 6 months to 15 years of age in a clinical population.

Carsin-Vu A, Corouge I, Commowick O, Bouzillé G, Barillot C, Ferré JC, Proisy M.

Eur J Radiol. 2018 Apr;101:38-44. doi: 10.1016/j.ejrad.2018.02.003. Epub 2018 Feb 6.


The first MICCAI challenge on PET tumor segmentation.

Hatt M, Laurent B, Ouahabi A, Fayad H, Tan S, Li L, Lu W, Jaouen V, Tauber C, Czakon J, Drapejkowski F, Dyrka W, Camarasu-Pop S, Cervenansky F, Girard P, Glatard T, Kain M, Yao Y, Barillot C, Kirov A, Visvikis D.

Med Image Anal. 2018 Feb;44:177-195. doi: 10.1016/ Epub 2017 Dec 9.


USPIO-positive MS lesions are associated with greater tissue damage than gadolinium-positive-only lesions during 3-year follow-up.

Kerbrat A, Combès B, Commowick O, Maarouf A, Bannier E, Ferré JC, Tourbah A, Ranjeva JP, Barillot C, Edan G.

Mult Scler. 2017 Oct 1:1352458517736148. doi: 10.1177/1352458517736148. [Epub ahead of print]


Unimodal Versus Bimodal EEG-fMRI Neurofeedback of a Motor Imagery Task.

Perronnet L, Lécuyer A, Mano M, Bannier E, Lotte F, Clerc M, Barillot C.

Front Hum Neurosci. 2017 Apr 20;11:193. doi: 10.3389/fnhum.2017.00193. eCollection 2017.


How to Build a Hybrid Neurofeedback Platform Combining EEG and fMRI.

Mano M, Lécuyer A, Bannier E, Perronnet L, Noorzadeh S, Barillot C.

Front Neurosci. 2017 Mar 21;11:140. doi: 10.3389/fnins.2017.00140. eCollection 2017.


Block-Matching Distortion Correction of Echo-Planar Images With Opposite Phase Encoding Directions.

Hedouin R, Commowick O, Bannier E, Scherrer B, Taquet M, Warfield SK, Barillot C.

IEEE Trans Med Imaging. 2017 May;36(5):1106-1115. doi: 10.1109/TMI.2016.2646920. Epub 2017 Jan 9.


Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

Carass A, Roy S, Jog A, Cuzzocreo JL, Magrath E, Gherman A, Button J, Nguyen J, Prados F, Sudre CH, Jorge Cardoso M, Cawley N, Ciccarelli O, Wheeler-Kingshott CAM, Ourselin S, Catanese L, Deshpande H, Maurel P, Commowick O, Barillot C, Tomas-Fernandez X, Warfield SK, Vaidya S, Chunduru A, Muthuganapathy R, Krishnamurthi G, Jesson A, Arbel T, Maier O, Handels H, Iheme LO, Unay D, Jain S, Sima DM, Smeets D, Ghafoorian M, Platel B, Birenbaum A, Greenspan H, Bazin PL, Calabresi PA, Crainiceanu CM, Ellingsen LM, Reich DS, Prince JL, Pham DL.

Neuroimage. 2017 Mar 1;148:77-102. doi: 10.1016/j.neuroimage.2016.12.064. Epub 2017 Jan 11.


Imaging biomarkers in multiple Sclerosis: From image analysis to population imaging.

Barillot C, Edan G, Commowick O.

Med Image Anal. 2016 Oct;33:134-139. doi: 10.1016/ Epub 2016 Jun 15.


An a contrario approach for the detection of patient-specific brain perfusion abnormalities with arterial spin labelling.

Maumet C, Maurel P, Ferré JC, Barillot C.

Neuroimage. 2016 Jul 1;134:424-433. doi: 10.1016/j.neuroimage.2016.03.054. Epub 2016 Mar 31.


Ultra-small superparamagnetic iron oxide enhancement is associated with higher loss of brain tissue structure in clinically isolated syndrome.

Maarouf A, Ferré JC, Zaaraoui W, Le Troter A, Bannier E, Berry I, Guye M, Pierot L, Barillot C, Pelletier J, Tourbah A, Edan G, Audoin B, Ranjeva JP.

Mult Scler. 2016 Jul;22(8):1032-9. doi: 10.1177/1352458515607649. Epub 2015 Oct 9.


Classification of multiple sclerosis lesions using adaptive dictionary learning.

Deshpande H, Maurel P, Barillot C.

Comput Med Imaging Graph. 2015 Dec;46 Pt 1:2-10. doi: 10.1016/j.compmedimag.2015.05.003. Epub 2015 May 21.


Diffusion MRI abnormalities detection with orientation distribution functions: a multiple sclerosis longitudinal study.

Commowick O, Maarouf A, Ferré JC, Ranjeva JP, Edan G, Barillot C.

Med Image Anal. 2015 May;22(1):114-23. doi: 10.1016/ Epub 2015 Mar 20.


17th International Conference on Medical Image Computing and Computer-Assisted Intervention.

Golland P, Hata N, Barillot C, Hornegger J, Howe R.

Med Image Comput Comput Assist Interv. 2014;17(Pt 2):V-VI. No abstract available.


Preface. Medical image computing and computer-assisted intervention--MICCAI2014.

Golland P, Hata N, Barillot C, Hornegger J, Howe R.

Med Image Comput Comput Assist Interv. 2014;17(Pt 1):V-VI. No abstract available.


Preface. The 17th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2014).

Golland P, Hata N, Barillot C, Hornegger J, Howe R.

Med Image Comput Comput Assist Interv. 2014;17(Pt 3):V-VI. No abstract available.


Editorial for the MEDIA special issue on MICCAI 2013.

Mori K, Sato Y, Barillot C, Navab N.

Med Image Anal. 2014 Dec;18(8):1261. doi: 10.1016/ No abstract available.


Hemodynamic quantification in brain arteriovenous malformations with time-resolved spin-labeled magnetic resonance angiography.

Raoult H, Bannier E, Maurel P, Neyton C, Ferré JC, Schmitt P, Barillot C, Gauvrit JY.

Stroke. 2014 Aug;45(8):2461-4. doi: 10.1161/STROKEAHA.114.006080. Epub 2014 Jul 1.


Predictive value of imaging markers at multiple sclerosis disease onset based on gadolinium- and USPIO-enhanced MRI and machine learning.

Crimi A, Commowick O, Maarouf A, Ferré JC, Bannier E, Tourbah A, Berry I, Ranjeva JP, Edan G, Barillot C.

PLoS One. 2014 Apr 1;9(4):e93024. doi: 10.1371/journal.pone.0093024. eCollection 2014.


Robust estimation of the cerebral blood flow in arterial spin labelling.

Maumet C, Maurel P, Ferré JC, Barillot C.

Magn Reson Imaging. 2014 Jun;32(5):497-504. doi: 10.1016/j.mri.2014.01.016. Epub 2014 Feb 4.


Preface. The 16th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2013 was held in Nagoya, Japan during September 22-26, 2013.

Mori K, Sakuma I, Sato Y, Barillot C, Navab N.

Med Image Comput Comput Assist Interv. 2013;16(Pt 2):V-X. No abstract available.


Preface. The 16th international conference on medical image computing and computer-assisted intervention-MICCAI 2013.

Mori K, Sakuma I, Sato Y, Barillot C, Navab N.

Med Image Comput Comput Assist Interv. 2013;16(Pt 1):V-VIII. No abstract available.


Time-resolved spin-labeled MR angiography for the depiction of cerebral arteriovenous malformations: a comparison of techniques.

Raoult H, Bannier E, Robert B, Barillot C, Schmitt P, Gauvrit JY.

Radiology. 2014 May;271(2):524-33. doi: 10.1148/radiol.13131252. Epub 2013 Dec 2.


Patient-specific detection of perfusion abnormalities combining within-subject and between-subject variances in Arterial Spin Labeling.

Maumet C, Maurel P, Ferré JC, Carsin B, Barillot C.

Neuroimage. 2013 Nov 1;81:121-130. doi: 10.1016/j.neuroimage.2013.04.079. Epub 2013 May 10.


Optimal individual inversion time in brain arterial spin labeling perfusion magnetic resonance imaging: correlation with carotid hemodynamics measured with cine phase-contrast magnetic resonance imaging.

Ferré JC, Petr J, Barillot C, Raoult H, Gauvrit JY.

J Comput Assist Tomogr. 2013 Mar-Apr;37(2):247-51. doi: 10.1097/RCT.0b013e31827cd548.


Template-based approach for detecting motor task activation-related hyperperfusion in pulsed ASL data.

Petr J, Ferré JC, Raoult H, Bannier E, Gauvrit JY, Barillot C.

Hum Brain Mapp. 2014 Apr;35(4):1179-89. doi: 10.1002/hbm.22243. Epub 2013 Feb 13.


A comprehensive framework for the detection of individual brain perfusion abnormalities using arterial spin labeling.

Maumet C, Maurel P, Ferré JC, Barillot C.

Med Image Comput Comput Assist Interv. 2012;15(Pt 3):542-9.


Adaptive multi-modal particle filtering for probabilistic white matter tractography.

Stamm A, Commowick O, Barillot C, Pérez P.

Inf Process Med Imaging. 2013;23:594-606.


Functional arterial spin labeling: Optimal sequence duration for motor activation mapping in clinical practice.

Raoult H, Ferré JC, Petr J, Bannier E, Stamm A, Barillot C, Gauvrit JY.

J Magn Reson Imaging. 2012 Dec;36(6):1435-44. doi: 10.1002/jmri.23782. Epub 2012 Aug 24.


3D Rigid Registration of Intraoperative Ultrasound and Preoperative MR Brain Images Based on Hyperechogenic Structures.

Coupé P, Hellier P, Morandi X, Barillot C.

Int J Biomed Imaging. 2012;2012:531319. doi: 10.1155/2012/531319. Epub 2012 Jan 19.


Improving quality of arterial spin labeling MR imaging at 3 Tesla with a 32-channel coil and parallel imaging.

Ferré JC, Petr J, Bannier E, Barillot C, Gauvrit JY.

J Magn Reson Imaging. 2012 May;35(5):1233-9. doi: 10.1002/jmri.23586. Epub 2012 Jan 13.


[Innovations in functional MR imaging of the brain: arterial spin labeling and diffusion].

Raoult H, Gauvrit JY, Petr J, Bannier E, Le Rumeur E, Barillot C, Ferré JC.

J Radiol. 2011 Oct;92(10):878-88. doi: 10.1016/j.jradio.2011.04.016. Epub 2011 Sep 28. Review. French.


Abnormal functional lateralization and activity of language brain areas in typical specific language impairment (developmental dysphasia).

de Guibert C, Maumet C, Jannin P, Ferré JC, Tréguier C, Barillot C, Le Rumeur E, Allaire C, Biraben A.

Brain. 2011 Oct;134(Pt 10):3044-58. doi: 10.1093/brain/awr141. Epub 2011 Jun 29.


Arterial spin labeling for motor activation mapping at 3T with a 32-channel coil: reproducibility and spatial accuracy in comparison with BOLD fMRI.

Raoult H, Petr J, Bannier E, Stamm A, Gauvrit JY, Barillot C, Ferré JC.

Neuroimage. 2011 Sep 1;58(1):157-67. doi: 10.1016/j.neuroimage.2011.06.011. Epub 2011 Jun 14.


Trimmed-likelihood estimation for focal lesions and tissue segmentation in multisequence MRI for multiple sclerosis.

García-Lorenzo D, Prima S, Arnold DL, Collins DL, Barillot C.

IEEE Trans Med Imaging. 2011 Aug;30(8):1455-67. doi: 10.1109/TMI.2011.2114671. Epub 2011 Feb 14.


Assessment of standard coil positioning in transcranial magnetic stimulation in depression.

Nauczyciel C, Hellier P, Morandi X, Blestel S, Drapier D, Ferre JC, Barillot C, Millet B.

Psychiatry Res. 2011 Apr 30;186(2-3):232-8. doi: 10.1016/j.psychres.2010.06.012. Epub 2010 Aug 7.


Grid-wide neuroimaging data federation in the context of the NeuroLOG project.

Michel F, Gaignard A, Ahmad F, Barillot C, Batrancourt B, Dojat M, Gibaud B, Girard P, Godard D, Kassel G, Lingrand D, Malandain G, Montagnat J, Pélégrini-Issac M, Pennec X, Rojas Balderrama J, Wali B.

Stud Health Technol Inform. 2010;159:112-23.


FMRI language mapping in children: a panel of language tasks using visual and auditory stimulation without reading or metalinguistic requirements.

de Guibert C, Maumet C, Ferré JC, Jannin P, Biraben A, Allaire C, Barillot C, Le Rumeur E.

Neuroimage. 2010 Jun;51(2):897-909. doi: 10.1016/j.neuroimage.2010.02.054. Epub 2010 Feb 24.


SPECT and PET analysis of subthalamic stimulation in Parkinson's disease: analysis using a manual segmentation.

Haegelen C, García-Lorenzo D, Le Jeune F, Péron J, Gibaud B, Riffaud L, Brassier G, Barillot C, Vérin M, Morandi X.

J Neurol. 2010 Mar;257(3):375-82. doi: 10.1007/s00415-009-5327-8. Epub 2009 Sep 23.


Nonlocal means-based speckle filtering for ultrasound images.

Coupé P, Hellier P, Kervrann C, Barillot C.

IEEE Trans Image Process. 2009 Oct;18(10):2221-9. doi: 10.1109/TIP.2009.2024064. Epub 2009 May 27.


Atlas-based segmentation of 3D cerebral structures with competitive level sets and fuzzy control.

Ciofolo C, Barillot C.

Med Image Anal. 2009 Jun;13(3):456-70. doi: 10.1016/ Epub 2009 Mar 10.


Multiple sclerosis lesion segmentation using an automatic multimodal graph cuts.

García-Lorenzo D, Lecoeur J, Arnold DL, Collins DL, Barillot C.

Med Image Comput Comput Assist Interv. 2009;12(Pt 2):584-91.


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