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Transcriptomic and Single-Cell Analysis of the Murine Parotid Gland.

Oyelakin A, Song EAC, Min S, Bard JE, Kann JV, Horeth E, Smalley K, Kramer JM, Sinha S, Romano RA.

J Dent Res. 2019 Oct 17:22034519882355. doi: 10.1177/0022034519882355. [Epub ahead of print]


Amplification of the Quantum Yields of 2-λ5-Phosphaquinolin-2-ones through Phosphorus Center Modification.

Bard JP, Bates HJ, Deng CL, Zakharov LN, Johnson DW, Haley MM.

J Org Chem. 2019 Oct 9. doi: 10.1021/acs.joc.9b02132. [Epub ahead of print]


Reactivation of super-enhancers by KLF4 in human Head and Neck Squamous Cell Carcinoma.

Tsompana M, Gluck C, Sethi I, Joshi I, Bard J, Nowak NJ, Sinha S, Buck MJ.

Oncogene. 2019 Sep 2. doi: 10.1038/s41388-019-0990-4. [Epub ahead of print]


Direct-from-Specimen Pathogen Identification: Evolution of Syndromic Panels.

Couturier MR, Bard JD.

Clin Lab Med. 2019 Sep;39(3):433-451. doi: 10.1016/j.cll.2019.05.005. Review.


PN-Containing Pyrene Derivatives: Synthesis, Structure, and Photophysical Properties.

Deng CL, Bard JP, Zakharov LN, Johnson DW, Haley MM.

Org Lett. 2019 Aug 16;21(16):6427-6431. doi: 10.1021/acs.orglett.9b02332. Epub 2019 Jul 26.


Allele-selective transcriptional repression of mutant HTT for the treatment of Huntington's disease.

Zeitler B, Froelich S, Marlen K, Shivak DA, Yu Q, Li D, Pearl JR, Miller JC, Zhang L, Paschon DE, Hinkley SJ, Ankoudinova I, Lam S, Guschin D, Kopan L, Cherone JM, Nguyen HB, Qiao G, Ataei Y, Mendel MC, Amora R, Surosky R, Laganiere J, Vu BJ, Narayanan A, Sedaghat Y, Tillack K, Thiede C, Gärtner A, Kwak S, Bard J, Mrzljak L, Park L, Heikkinen T, Lehtimäki KK, Svedberg MM, Häggkvist J, Tari L, Tóth M, Varrone A, Halldin C, Kudwa AE, Ramboz S, Day M, Kondapalli J, Surmeier DJ, Urnov FD, Gregory PD, Rebar EJ, Muñoz-Sanjuán I, Zhang HS.

Nat Med. 2019 Jul;25(7):1131-1142. doi: 10.1038/s41591-019-0478-3. Epub 2019 Jul 1.


Attenuation of PRRX2 and HEY2 enables efficient conversion of adult human skin fibroblasts to neurons.

Li H, Jiang H, Yin X, Bard JE, Zhang B, Feng J.

Biochem Biophys Res Commun. 2019 Aug 27;516(3):765-769. doi: 10.1016/j.bbrc.2019.06.089. Epub 2019 Jun 26.


New UPLC-MS/MS assay for the determination of tamoxifen and its metabolites in human plasma, application to patients.

Bobin-Dubigeon C, Campone M, Rossignol E, Salaun E, Amiand MB, Bard JM.

Future Sci OA. 2019 Mar 22;5(5):FSO374. doi: 10.2144/fsoa-2018-0113. eCollection 2019 Jun.


Contribution of DNA methylation to the expression of FCGRT in human liver and myocardium.

Cejas RB, Ferguson DC, Quiñones-Lombraña A, Bard JE, Blanco JG.

Sci Rep. 2019 Jun 17;9(1):8674. doi: 10.1038/s41598-019-45203-1.


Naphtho[2,1- e]-1,2-azaphosphorine 2-Oxide Derivatives: Synthesis, Optoelectronic Properties, and Self-Dimerization Phenomena.

Deng CL, Bard JP, Zakharov LN, Johnson DW, Haley MM.

J Org Chem. 2019 Jun 21;84(12):8131-8139. doi: 10.1021/acs.joc.9b00994. Epub 2019 Jun 7.


Targeting bioactive compounds in natural extracts - Development of a comprehensive workflow combining chemical and biological data.

Ory L, Nazih EH, Daoud S, Mocquard J, Bourjot M, Margueritte L, Delsuc MA, Bard JM, Pouchus YF, Bertrand S, Roullier C.

Anal Chim Acta. 2019 Sep 6;1070:29-42. doi: 10.1016/j.aca.2019.04.038. Epub 2019 Apr 23.


Rapid and Accurate Diagnosis of the Respiratory Disease Pertussis on a Point-of-Care Biochip.

Dou M, Macias N, Shen F, Bard JD, Domínguez DC, Li X.

EClinicalMedicine. 2019 Feb;8:72-77. doi: 10.1016/j.eclinm.2019.02.008. Epub 2019 Mar 5.


The 26S Proteasome Utilizes a Kinetic Gateway to Prioritize Substrate Degradation.

Bard JAM, Bashore C, Dong KC, Martin A.

Cell. 2019 Apr 4;177(2):286-298.e15. doi: 10.1016/j.cell.2019.02.031. Epub 2019 Mar 28.


Meso scale discovery-based assays for the detection of aggregated huntingtin.

Reindl W, Baldo B, Schulz J, Janack I, Lindner I, Kleinschmidt M, Sedaghat Y, Thiede C, Tillack K, Schmidt C, Cardaun I, Schwagarus T, Herrmann F, Hotze M, Osborne GF, Herrmann S, Weiss A, Zerbinatti C, Bates GP, Bard J, Munoz-Sanjuan I, Macdonald D.

PLoS One. 2019 Mar 26;14(3):e0213521. doi: 10.1371/journal.pone.0213521. eCollection 2019.


Diabetes and dyslipidaemia are associated with oxidative stress independently of inflammation in long-term antiretroviral-treated HIV-infected patients.

Bastard JP, Couffignal C, Fellahi S, Bard JM, Mentre F, Salmon D, Katlama C, Raffi F, Leport C, Capeau J; ANRS CO, APROCO-COPILOTE Cohort study group.

Diabetes Metab. 2019 Mar 9. pii: S1262-3636(19)30055-2. doi: 10.1016/j.diabet.2019.02.008. [Epub ahead of print]


Analyzing economies of scale and scope in hospitals by use of case mix planning.

McRae S, Brunner JO, Bard JF.

Health Care Manag Sci. 2019 Feb 21. doi: 10.1007/s10729-019-09476-2. [Epub ahead of print]


Exploiting the Hydrogen Bond Donor/Acceptor Properties of PN-Heterocycles: Selective Anion Receptors for Hydrogen Sulfate.

Deng CL, Bard JP, Lohrman JA, Barker JE, Zakharov LN, Johnson DW, Haley MM.

Angew Chem Int Ed Engl. 2019 Mar 18;58(12):3934-3938. doi: 10.1002/anie.201814431.


The 2018 rift eruption and summit collapse of Kīlauea Volcano.

Neal CA, Brantley SR, Antolik L, Babb JL, Burgess M, Calles K, Cappos M, Chang JC, Conway S, Desmither L, Dotray P, Elias T, Fukunaga P, Fuke S, Johanson IA, Kamibayashi K, Kauahikaua J, Lee RL, Pekalib S, Miklius A, Million W, Moniz CJ, Nadeau PA, Okubo P, Parcheta C, Patrick MR, Shiro B, Swanson DA, Tollett W, Trusdell F, Younger EF, Zoeller MH, Montgomery-Brown EK, Anderson KR, Poland MP, Ball JL, Bard J, Coombs M, Dietterich HR, Kern C, Thelen WA, Cervelli PF, Orr T, Houghton BF, Gansecki C, Hazlett R, Lundgren P, Diefenbach AK, Lerner AH, Waite G, Kelly P, Clor L, Werner C, Mulliken K, Fisher G, Damby D.

Science. 2019 Jan 25;363(6425):367-374. doi: 10.1126/science.aav7046. Epub 2018 Dec 11.


RYR1 and CACNA1S genetic variants identified with statin-associated muscle symptoms.

Isackson PJ, Wang J, Zia M, Spurgeon P, Levesque A, Bard J, James S, Nowak N, Lee TK, Vladutiu GD.

Pharmacogenomics. 2018 Nov;19(16):1235-1249. doi: 10.2217/pgs-2018-0106. Epub 2018 Oct 16.


Recombinant Expression, Unnatural Amino Acid Incorporation, and Site-Specific Labeling of 26S Proteasomal Subcomplexes.

Bard JAM, Martin A.

Methods Mol Biol. 2018;1844:219-236. doi: 10.1007/978-1-4939-8706-1_15.


Genetic and scRNA-seq Analysis Reveals Distinct Cell Populations that Contribute to Salivary Gland Development and Maintenance.

Song EC, Min S, Oyelakin A, Smalley K, Bard JE, Liao L, Xu J, Romano RA.

Sci Rep. 2018 Sep 19;8(1):14043. doi: 10.1038/s41598-018-32343-z.


Quantification of variation and the impact of biomass in targeted 16S rRNA gene sequencing studies.

Bender JM, Li F, Adisetiyo H, Lee D, Zabih S, Hung L, Wilkinson TA, Pannaraj PS, She RC, Bard JD, Tobin NH, Aldrovandi GM.

Microbiome. 2018 Sep 10;6(1):155. doi: 10.1186/s40168-018-0543-z.


Circulating microRNAs as biomarkers in traumatic brain injury.

Toffolo K, Osei J, Kelly W, Poulsen A, Donahue K, Wang J, Hunter M, Bard J, Wang J, Poulsen D.

Neuropharmacology. 2019 Feb;145(Pt B):199-208. doi: 10.1016/j.neuropharm.2018.08.028. Epub 2018 Sep 7. Review.


How the 21st Century Cures Act Can Mitigate the Ever Growing Problem of Mass Incarceration.

Bard JS.

Am J Law Med. 2018 May;44(2-3):387-402. doi: 10.1177/0098858818789416. No abstract available.


Variability of Daptomycin MIC Values for Enterococcus faecium When Measured by Reference Broth Microdilution and Gradient Diffusion Tests.

Campeau SA, Schuetz AN, Kohner P, Arias CA, Hemarajata P, Bard JD, Humphries RM.

Antimicrob Agents Chemother. 2018 Aug 27;62(9). pii: e00745-18. doi: 10.1128/AAC.00745-18. Print 2018 Sep.


Chronic vitamin D insufficiency impairs physical performance in C57BL/6J mice.

Seldeen KL, Pang M, Leiker MM, Bard JE, Rodríguez-Gonzalez M, Hernandez M, Sheridan Z, Nowak N, Troen BR.

Aging (Albany NY). 2018 Jun 14;10(6):1338-1355. doi: 10.18632/aging.101471.


Thymosin beta 4 induces significant changes in the plasma miRNA profile following severe traumatic brain injury in the rat lateral fluid percussion injury model.

Osei J, Kelly W, Toffolo K, Donahue K, Levy B, Bard J, Wang J, Levy E, Nowak N, Poulsen D.

Expert Opin Biol Ther. 2018 Jul;18(sup1):159-164. doi: 10.1080/14712598.2018.1484102.


Structure and Function of the 26S Proteasome.

Bard JAM, Goodall EA, Greene ER, Jonsson E, Dong KC, Martin A.

Annu Rev Biochem. 2018 Jun 20;87:697-724. doi: 10.1146/annurev-biochem-062917-011931. Epub 2018 Apr 13. Review.


Kinetics of plasma apolipoprotein E isoforms by LC-MS/MS: a pilot study.

Blanchard V, Ramin-Mangata S, Billon-Crossouard S, Aguesse A, Durand M, Chemello K, Nativel B, Flet L, Chétiveaux M, Jacobi D, Bard JM, Ouguerram K, Lambert G, Krempf M, Croyal M.

J Lipid Res. 2018 May;59(5):892-900. doi: 10.1194/jlr.P083576. Epub 2018 Mar 14.


Tinkering and the Origins of Heritable Anatomical Variation in Vertebrates.

Bard JBL.

Biology (Basel). 2018 Feb 26;7(1). pii: E20. doi: 10.3390/biology7010020. Review.


Lithocholic bile acid inhibits lipogenesis and induces apoptosis in breast cancer cells.

Luu TH, Bard JM, Carbonnelle D, Chaillou C, Huvelin JM, Bobin-Dubigeon C, Nazih H.

Cell Oncol (Dordr). 2018 Feb;41(1):13-24. doi: 10.1007/s13402-017-0353-5. Epub 2017 Oct 9.


Liver X Receptor (LXR)-regulated Genes of Cholesterol Trafficking and Breast Cancer Severity.

Bobin-Dubigeon C, Chauvin A, Brillaud-Meflah V, Boiffard F, Joalland MP, Bard JM.

Anticancer Res. 2017 Oct;37(10):5495-5498.


Daunorubicin 90 mg/m2 in Acute Myeloid Leukemia Induction: Increased Toxicity in Young Patients.

Portugal R, Lyrio R, Loureiro M, Urago K, Bard J, Borchardt A, Garnica M, Nucci M.

Clin Lymphoma Myeloma Leuk. 2017 Aug;17(8):527-531. doi: 10.1016/j.clml.2017.06.018. Epub 2017 Jun 21.


C.H. Waddington's differences with the creators of the modern evolutionary synthesis: a tale of two genes.

Bard JBL.

Hist Philos Life Sci. 2017 Aug 8;39(3):18. doi: 10.1007/s40656-017-0143-4.


LXR Activation Down-regulates Lipid Raft Markers FLOT2 and DHHC5 in MCF-7 Breast Cancer Cells.

Carbonnelle D, Luu TH, Chaillou C, Huvelin JM, Bard JM, Nazih H.

Anticancer Res. 2017 Aug;37(8):4067-4073.


Trypanosome RNA Editing Mediator Complex proteins have distinct functions in gRNA utilization.

Simpson RM, Bruno AE, Chen R, Lott K, Tylec BL, Bard JE, Sun Y, Buck MJ, Read LK.

Nucleic Acids Res. 2017 Jul 27;45(13):7965-7983. doi: 10.1093/nar/gkx458.


Interindividual variability in the cholesterol-lowering effect of supplementation with plant sterols or stanols.

Fumeron F, Bard JM, Lecerf JM.

Nutr Rev. 2017 Feb 1;75(2):134-145. doi: 10.1093/nutrit/nuw059. Review.


Intestinal Proportion of Blautia sp. is Associated with Clinical Stage and Histoprognostic Grade in Patients with Early-Stage Breast Cancer.

Luu TH, Michel C, Bard JM, Dravet F, Nazih H, Bobin-Dubigeon C.

Nutr Cancer. 2017 Feb-Mar;69(2):267-275. doi: 10.1080/01635581.2017.1263750. Epub 2017 Jan 17.


Leptin and adiponectin as new markers of undernutrition in cancer.

Bobin-Dubigeon C, Lefrançois A, Vansteene D, Dupé M, Joalland MP, Bard JM.

Clin Biochem. 2017 Jun;50(9):525-528. doi: 10.1016/j.clinbiochem.2017.01.001. Epub 2017 Jan 6.


Longitudinal Small-Animal PET Imaging of the zQ175 Mouse Model of Huntington Disease Shows In Vivo Changes of Molecular Targets in the Striatum and Cerebral Cortex.

Häggkvist J, Tóth M, Tari L, Varnäs K, Svedberg M, Forsberg A, Nag S, Dominguez C, Munoz-Sanjuan I, Bard J, Wityak J, Varrone A, Halldin C, Mrzljak L.

J Nucl Med. 2017 Apr;58(4):617-622. doi: 10.2967/jnumed.116.180497. Epub 2016 Nov 10.


Something Doesn't Smell Right: When a Patient With Empyema Isn't Responding to Guideline-Based Management.

Chen NY, Bender JM, Bard JD, Trost MJ, Corden MH.

Hosp Pediatr. 2016 Nov;6(11):702-706. Epub 2016 Oct 14. No abstract available.


Analysis of Heteroplasmic Variants in the Cardiac Mitochondrial Genome of Individuals with Down Syndrome.

Hefti E, Bard J, Blanco JG.

Hum Mutat. 2017 Jan;38(1):48-54. doi: 10.1002/humu.23071. Epub 2016 Sep 26.


Impact of a Rapid Blood Culture Assay for Gram-Positive Identification and Detection of Resistance Markers in a Pediatric Hospital.

Felsenstein S, Bender JM, Sposto R, Gentry M, Takemoto C, Bard JD.

Arch Pathol Lab Med. 2016 Mar;140(3):267-75. doi: 10.5858/arpa.2015-0119-OA.


High-throughput sequencing of partially edited trypanosome mRNAs reveals barriers to editing progression and evidence for alternative editing.

Simpson RM, Bruno AE, Bard JE, Buck MJ, Read LK.

RNA. 2016 May;22(5):677-95. doi: 10.1261/rna.055160.115. Epub 2016 Feb 23.


ΔNp63 regulates IL-33 and IL-31 signaling in atopic dermatitis.

Rizzo JM, Oyelakin A, Min S, Smalley K, Bard J, Luo W, Nyquist J, Guttman-Yassky E, Yoshida T, De Benedetto A, Beck LA, Sinha S, Romano RA.

Cell Death Differ. 2016 Jun;23(6):1073-85. doi: 10.1038/cdd.2015.162. Epub 2016 Jan 15.


A Combination of Structural and Empirical Analyses Delineates the Key Contacts Mediating Stability and Affinity Increases in an Optimized Biotherapeutic Single-chain Fv (scFv).

Tu C, Terraube V, Tam AS, Stochaj W, Fennell BJ, Lin L, Stahl M, LaVallie ER, Somers W, Finlay WJ, Mosyak L, Bard J, Cunningham O.

J Biol Chem. 2016 Jan 15;291(3):1267-76. doi: 10.1074/jbc.M115.688010. Epub 2015 Oct 29.


Performance of the CLSI Carba NP and the Rosco Carb Screen Assays Using North American Carbapenemase-Producing Enterobacteriaceae and Pseudomonas aeruginosa Isolates.

Gallagher LC, Roundtree SS, Lancaster DP, Rudin SD, Bard JD, Roberts AL, Marshall SH, Bonomo RA, Sullivan KV.

J Clin Microbiol. 2015 Oct;53(10):3370-3. doi: 10.1128/JCM.01547-15. Epub 2015 Aug 12.


Introducing Law Students to Public Health Law through a Bed Bug Scenario.

Bard JS.

J Law Med Ethics. 2015 Summer;43 Suppl 2:7-11. doi: 10.1111/jlme.12261.


Paired measurement of serum amyloid A (SAA) and paraoxonase 1 (PON1) as useful markers in breast cancer recurrence.

Bobin-Dubigeon C, Lefrançois A, Classe JM, Joalland MP, Bard JM.

Clin Biochem. 2015 Nov;48(16-17):1181-3. doi: 10.1016/j.clinbiochem.2015.07.020. Epub 2015 Jul 17.


Variation analysis of transcriptome changes reveals cochlear genes and their associated functions in cochlear susceptibility to acoustic overstimulation.

Yang S, Cai Q, Bard J, Jamison J, Wang J, Yang W, Hu BH.

Hear Res. 2015 Dec;330(Pt A):78-89. doi: 10.1016/j.heares.2015.04.010. Epub 2015 May 27.

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