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Items: 23

1.

P-TEFb Activation by RBM7 Shapes a Pro-survival Transcriptional Response to Genotoxic Stress.

Bugai A, Quaresma AJC, Friedel CC, Lenasi T, Düster R, Sibley CR, Fujinaga K, Kukanja P, Hennig T, Blasius M, Geyer M, Ule J, Dölken L, Barborič M.

Mol Cell. 2019 Apr 18;74(2):254-267.e10. doi: 10.1016/j.molcel.2019.01.033. Epub 2019 Feb 26.

2.

Influenza virus NS1 protein binds cellular DNA to block transcription of antiviral genes.

Anastasina M, Le May N, Bugai A, Fu Y, Söderholm S, Gaelings L, Ohman T, Tynell J, Kyttänen S, Barboric M, Nyman TA, Matikainen S, Julkunen I, Butcher SJ, Egly JM, Kainov DE.

Biochim Biophys Acta. 2016 Nov;1859(11):1440-1448. doi: 10.1016/j.bbagrm.2016.09.005. Epub 2016 Sep 21.

PMID:
27664935
3.

Cracking the control of RNA polymerase II elongation by 7SK snRNP and P-TEFb.

C Quaresma AJ, Bugai A, Barboric M.

Nucleic Acids Res. 2016 Sep 19;44(16):7527-39. doi: 10.1093/nar/gkw585. Epub 2016 Jul 1. Review.

4.

The two sides of Tat.

Barboric M, Fujinaga K.

Elife. 2016 Jan 19;5:e12686. doi: 10.7554/eLife.12686.

5.

Ovarian carcinoma CDK12 mutations misregulate expression of DNA repair genes via deficient formation and function of the Cdk12/CycK complex.

Ekumi KM, Paculova H, Lenasi T, Pospichalova V, Bösken CA, Rybarikova J, Bryja V, Geyer M, Blazek D, Barboric M.

Nucleic Acids Res. 2015 Mar 11;43(5):2575-89. doi: 10.1093/nar/gkv101. Epub 2015 Feb 20.

6.

Mutual relationships between transcription and pre-mRNA processing in the synthesis of mRNA.

Lenasi T, Barboric M.

Wiley Interdiscip Rev RNA. 2013 Mar-Apr;4(2):139-54. doi: 10.1002/wrna.1148. Epub 2012 Nov 26. Review.

PMID:
23184646
7.

PKC phosphorylates HEXIM1 and regulates P-TEFb activity.

Fujinaga K, Barboric M, Li Q, Luo Z, Price DH, Peterlin BM.

Nucleic Acids Res. 2012 Oct;40(18):9160-70. doi: 10.1093/nar/gks682. Epub 2012 Jul 20.

8.

Cap-binding protein complex links pre-mRNA capping to transcription elongation and alternative splicing through positive transcription elongation factor b (P-TEFb).

Lenasi T, Peterlin BM, Barboric M.

J Biol Chem. 2011 Jul 1;286(26):22758-68. doi: 10.1074/jbc.M111.235077. Epub 2011 May 2.

9.

Kick-sTARting HIV-1 transcription elongation by 7SK snRNP deporTATion.

Barboric M, Lenasi T.

Nat Struct Mol Biol. 2010 Aug;17(8):928-30. doi: 10.1038/nsmb0810-928.

PMID:
20683478
10.

P-TEFb stimulates transcription elongation and pre-mRNA splicing through multilateral mechanisms.

Lenasi T, Barboric M.

RNA Biol. 2010 Mar-Apr;7(2):145-50. Epub 2010 Mar 29. Review.

PMID:
20305375
11.

7SK snRNP/P-TEFb couples transcription elongation with alternative splicing and is essential for vertebrate development.

Barboric M, Lenasi T, Chen H, Johansen EB, Guo S, Peterlin BM.

Proc Natl Acad Sci U S A. 2009 May 12;106(19):7798-803. doi: 10.1073/pnas.0903188106. Epub 2009 Apr 27.

12.

HMBA releases P-TEFb from HEXIM1 and 7SK snRNA via PI3K/Akt and activates HIV transcription.

Contreras X, Barboric M, Lenasi T, Peterlin BM.

PLoS Pathog. 2007 Oct 12;3(10):1459-69.

13.

Structure of the Cyclin T binding domain of Hexim1 and molecular basis for its recognition of P-TEFb.

Dames SA, Schönichen A, Schulte A, Barboric M, Peterlin BM, Grzesiek S, Geyer M.

Proc Natl Acad Sci U S A. 2007 Sep 4;104(36):14312-7. Epub 2007 Aug 27.

14.

Tat competes with HEXIM1 to increase the active pool of P-TEFb for HIV-1 transcription.

Barboric M, Yik JH, Czudnochowski N, Yang Z, Chen R, Contreras X, Geyer M, Matija Peterlin B, Zhou Q.

Nucleic Acids Res. 2007;35(6):2003-12. Epub 2007 Mar 6.

15.

Oligomerization of HEXIM1 via 7SK snRNA and coiled-coil region directs the inhibition of P-TEFb.

Blazek D, Barboric M, Kohoutek J, Oven I, Peterlin BM.

Nucleic Acids Res. 2005 Dec 23;33(22):7000-10. Print 2005.

16.

Interplay between 7SK snRNA and oppositely charged regions in HEXIM1 direct the inhibition of P-TEFb.

Barboric M, Kohoutek J, Price JP, Blazek D, Price DH, Peterlin BM.

EMBO J. 2005 Dec 21;24(24):4291-303. Epub 2005 Dec 15.

17.

Ubiquitylation of Cdk9 by Skp2 facilitates optimal Tat transactivation.

Barboric M, Zhang F, Besenicar M, Plemenitas A, Peterlin BM.

J Virol. 2005 Sep;79(17):11135-41.

18.

Identification of a cyclin T-binding domain in Hexim1 and biochemical analysis of its binding competition with HIV-1 Tat.

Schulte A, Czudnochowski N, Barboric M, Schönichen A, Blazek D, Peterlin BM, Geyer M.

J Biol Chem. 2005 Jul 1;280(26):24968-77. Epub 2005 Apr 25.

19.

A new paradigm in eukaryotic biology: HIV Tat and the control of transcriptional elongation.

Barboric M, Peterlin BM.

PLoS Biol. 2005 Feb;3(2):e76. No abstract available.

20.

A model of repression: CTD analogs and PIE-1 inhibit transcriptional elongation by P-TEFb.

Zhang F, Barboric M, Blackwell TK, Peterlin BM.

Genes Dev. 2003 Mar 15;17(6):748-58.

21.

NF-kappaB binds P-TEFb to stimulate transcriptional elongation by RNA polymerase II.

Barboric M, Nissen RM, Kanazawa S, Jabrane-Ferrat N, Peterlin BM.

Mol Cell. 2001 Aug;8(2):327-37.

22.
23.

Tat transactivation: a model for the regulation of eukaryotic transcriptional elongation.

Taube R, Fujinaga K, Wimmer J, Barboric M, Peterlin BM.

Virology. 1999 Nov 25;264(2):245-53. Review. No abstract available.

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