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Items: 20

1.

A Novel Fluorescent GFP Chromophore Analog-Based Dye for Quantitative PCR.

Stakheev AA, Ryazantsev DY, Zvezdina YK, Baranov MS, Zavriev SK.

Biochemistry (Mosc). 2018 Jul;83(7):855-860. doi: 10.1134/S000629791807009X.

2.

Pyridinium Analogues of Green Fluorescent Protein Chromophore: Fluorogenic Dyes with Large Solvent-Dependent Stokes Shift.

Ermakova YG, Sen T, Bogdanova YA, Smirnov AY, Baleeva NS, Krylov AI, Baranov MS.

J Phys Chem Lett. 2018 Apr 19;9(8):1958-1963. doi: 10.1021/acs.jpclett.8b00512. Epub 2018 Apr 5.

PMID:
29589942
3.

A water-soluble precursor for efficient silica polymerization by silicateins.

Povarova NV, Markina NM, Baranov MS, Barinov NA, Klinov DV, Kozhemyako VB, Lukyanov KA.

Biochem Biophys Res Commun. 2018 Jan 8;495(2):2066-2070. doi: 10.1016/j.bbrc.2017.12.075. Epub 2017 Dec 15.

PMID:
29253563
4.

Unveiling Structural Motions of a Highly Fluorescent Superphotoacid by Locking and Fluorinating the GFP Chromophore in Solution.

Chen C, Liu W, Baranov MS, Baleeva NS, Yampolsky IV, Zhu L, Wang Y, Shamir A, Solntsev KM, Fang C.

J Phys Chem Lett. 2017 Dec 7;8(23):5921-5928. doi: 10.1021/acs.jpclett.7b02661. Epub 2017 Nov 22.

5.

Protein labeling for live cell fluorescence microscopy with a highly photostable renewable signal.

Bozhanova NG, Baranov MS, Klementieva NV, Sarkisyan KS, Gavrikov AS, Yampolsky IV, Zagaynova EV, Lukyanov SA, Lukyanov KA, Mishin AS.

Chem Sci. 2017 Oct 1;8(10):7138-7142. doi: 10.1039/c7sc01628j. Epub 2017 Aug 3.

6.

Yellow and Orange Fluorescent Proteins with Tryptophan-based Chromophores.

Bozhanova NG, Baranov MS, Sarkisyan KS, Gritcenko R, Mineev KS, Golodukhina SV, Baleeva NS, Lukyanov KA, Mishin AS.

ACS Chem Biol. 2017 Jul 21;12(7):1867-1873. doi: 10.1021/acschembio.7b00337. Epub 2017 Jun 6.

PMID:
28525263
7.

Mechanism and color modulation of fungal bioluminescence.

Kaskova ZM, Dörr FA, Petushkov VN, Purtov KV, Tsarkova AS, Rodionova NS, Mineev KS, Guglya EB, Kotlobay A, Baleeva NS, Baranov MS, Arseniev AS, Gitelson JI, Lukyanov S, Suzuki Y, Kanie S, Pinto E, Di Mascio P, Waldenmaier HE, Pereira TA, Carvalho RP, Oliveira AG, Oba Y, Bastos EL, Stevani CV, Yampolsky IV.

Sci Adv. 2017 Apr 26;3(4):e1602847. doi: 10.1126/sciadv.1602847. eCollection 2017 Apr.

8.

pH-Sensitive fluorophores from locked GFP chromophores by a non-alternant analogue of the photochemical meta effect.

Olsen S, Baranov MS, Baleeva NS, Antonova MM, Johnson KA, Solntsev KM.

Phys Chem Chem Phys. 2016 Sep 29;18(38):26703-26711.

PMID:
27711376
9.

Local fitness landscape of the green fluorescent protein.

Sarkisyan KS, Bolotin DA, Meer MV, Usmanova DR, Mishin AS, Sharonov GV, Ivankov DN, Bozhanova NG, Baranov MS, Soylemez O, Bogatyreva NS, Vlasov PK, Egorov ES, Logacheva MD, Kondrashov AS, Chudakov DM, Putintseva EV, Mamedov IZ, Tawfik DS, Lukyanov KA, Kondrashov FA.

Nature. 2016 May 19;533(7603):397-401. doi: 10.1038/nature17995. Epub 2016 May 11.

10.

[Novel Water-Soluble Substrate for Silicateins].

Povarova NV, Baranov MS, Kovalchuk SN, Semiletova IV, Lukyanov KA, Kozhemyak VB.

Bioorg Khim. 2015 May-Jun;41(3):380-2. Russian.

PMID:
26502615
11.

The Chemical Basis of Fungal Bioluminescence.

Purtov KV, Petushkov VN, Baranov MS, Mineev KS, Rodionova NS, Kaskova ZM, Tsarkova AS, Petunin AI, Bondar VS, Rodicheva EK, Medvedeva SE, Oba Y, Oba Y, Arseniev AS, Lukyanov S, Gitelson JI, Yampolsky IV.

Angew Chem Int Ed Engl. 2015 Jul 6;54(28):8124-8. doi: 10.1002/anie.201501779. Epub 2015 Jun 11.

PMID:
26094784
12.

Novel mechanism of bioluminescence: oxidative decarboxylation of a moiety adjacent to the light emitter of Fridericia luciferin.

Dubinnyi MA, Kaskova ZM, Rodionova NS, Baranov MS, Gorokhovatsky AY, Kotlobay A, Solntsev KM, Tsarkova AS, Petushkov VN, Yampolsky IV.

Angew Chem Int Ed Engl. 2015 Jun 8;54(24):7065-7. doi: 10.1002/anie.201501668. Epub 2015 Apr 27.

PMID:
25913753
13.

Novel peptide chemistry in terrestrial animals: natural luciferin analogues from the bioluminescent earthworm Fridericia heliota.

Dubinnyi MA, Tsarkova AS, Petushkov VN, Kaskova ZM, Rodionova NS, Kovalchuk SI, Ziganshin RH, Baranov MS, Mineev KS, Yampolsky IV.

Chemistry. 2015 Mar 2;21(10):3942-7. doi: 10.1002/chem.201406498. Epub 2015 Feb 4.

PMID:
25650756
14.

Red-shifted fluorescent aminated derivatives of a conformationally locked GFP chromophore.

Baranov MS, Solntsev KM, Baleeva NS, Mishin AS, Lukyanov SA, Lukyanov KA, Yampolsky IV.

Chemistry. 2014 Oct 6;20(41):13234-41. doi: 10.1002/chem.201403678. Epub 2014 Aug 29.

PMID:
25171432
15.

A novel type of luciferin from the Siberian luminous earthworm Fridericia heliota: structure elucidation by spectral studies and total synthesis.

Petushkov VN, Dubinnyi MA, Tsarkova AS, Rodionova NS, Baranov MS, Kublitski VS, Shimomura O, Yampolsky IV.

Angew Chem Int Ed Engl. 2014 May 26;53(22):5566-8. doi: 10.1002/anie.201400529. Epub 2014 Apr 15.

PMID:
24737705
16.

[Synthesis of the chromophores of fluorescent proteins and their analogs].

Baranov MS, Luk'ianov KA, Iampol'skiĭ IV.

Bioorg Khim. 2013 May-Jun;39(3):255-76. Review. Russian.

PMID:
24397025
17.

Chemical introduction of the green fluorescence: imaging of cysteine cathepsins by an irreversibly locked GFP fluorophore.

Frizler M, Yampolsky IV, Baranov MS, Stirnberg M, Gütschow M.

Org Biomol Chem. 2013 Sep 21;11(35):5913-21. doi: 10.1039/c3ob41341a.

PMID:
23912233
18.

A synthetic approach to GFP chromophore analogs from 3-azidocinnamates. Role of methyl rotors in chromophore photophysics.

Baranov MS, Solntsev KM, Lukyanov KA, Yampolsky IV.

Chem Commun (Camb). 2013 Jun 28;49(51):5778-80. doi: 10.1039/c3cc41948g.

PMID:
23689612
19.

Conformationally locked chromophores as models of excited-state proton transfer in fluorescent proteins.

Baranov MS, Lukyanov KA, Borissova AO, Shamir J, Kosenkov D, Slipchenko LV, Tolbert LM, Yampolsky IV, Solntsev KM.

J Am Chem Soc. 2012 Apr 4;134(13):6025-32. doi: 10.1021/ja3010144. Epub 2012 Mar 20.

PMID:
22404323
20.

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