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Items: 28

1.

SOX6 blocks the proliferation of BCR-ABL1+ and JAK2V617F+ leukemic cells.

Barbarani G, Fugazza C, Barabino SML, Ronchi AE.

Sci Rep. 2019 Mar 4;9(1):3388. doi: 10.1038/s41598-019-39926-4.

2.

Oxidative stress controls the choice of alternative last exons via a Brahma-BRCA1-CstF pathway.

Fontana GA, Rigamonti A, Lenzken SC, Filosa G, Alvarez R, Calogero R, Bianchi ME, Barabino SM.

Nucleic Acids Res. 2017 Jan 25;45(2):902-914. doi: 10.1093/nar/gkw780. Epub 2016 Sep 2.

3.

Minor intron splicing is regulated by FUS and affected by ALS-associated FUS mutants.

Reber S, Stettler J, Filosa G, Colombo M, Jutzi D, Lenzken SC, Schweingruber C, Bruggmann R, Bachi A, Barabino SM, Mühlemann O, Ruepp MD.

EMBO J. 2016 Jul 15;35(14):1504-21. doi: 10.15252/embj.201593791. Epub 2016 Jun 1.

4.

RNA-Binding Proteins in the Regulation of miRNA Activity: A Focus on Neuronal Functions.

Loffreda A, Rigamonti A, Barabino SM, Lenzken SC.

Biomolecules. 2015 Sep 30;5(4):2363-87. doi: 10.3390/biom5042363. Review.

5.

Neuronal RNA-binding proteins in health and disease.

Lenzken SC, Achsel T, Carrì MT, Barabino SM.

Wiley Interdiscip Rev RNA. 2014 Jul-Aug;5(4):565-76. doi: 10.1002/wrna.1231. Epub 2014 Mar 28. Review.

PMID:
24687864
6.

RNA splicing: a new player in the DNA damage response.

Lenzken SC, Loffreda A, Barabino SM.

Int J Cell Biol. 2013;2013:153634. doi: 10.1155/2013/153634. Epub 2013 Sep 12. Review.

7.

Proteomics strategies to identify SUMO targets and acceptor sites: a survey of RNA-binding proteins SUMOylation.

Filosa G, Barabino SM, Bachi A.

Neuromolecular Med. 2013 Dec;15(4):661-76. doi: 10.1007/s12017-013-8256-8. Epub 2013 Aug 25. Review.

PMID:
23979992
8.

Paraquat modulates alternative pre-mRNA splicing by modifying the intracellular distribution of SRPK2.

Vivarelli S, Lenzken SC, Ruepp MD, Ranzini F, Maffioletti A, Alvarez R, Mühlemann O, Barabino SM.

PLoS One. 2013 Apr 16;8(4):e61980. doi: 10.1371/journal.pone.0061980. Print 2013.

9.

mRNA 3' end processing and more--multiple functions of mammalian cleavage factor I-68.

Ruepp MD, Schümperli D, Barabino SM.

Wiley Interdiscip Rev RNA. 2011 Jan-Feb;2(1):79-91. doi: 10.1002/wrna.35. Review.

PMID:
21956970
10.

Mutant SOD1 and mitochondrial damage alter expression and splicing of genes controlling neuritogenesis in models of neurodegeneration.

Lenzken SC, Romeo V, Zolezzi F, Cordero F, Lamorte G, Bonanno D, Biancolini D, Cozzolino M, Pesaresi MG, Maracchioni A, Sanges R, Achsel T, Carrì MT, Calogero RA, Barabino SM.

Hum Mutat. 2011 Feb;32(2):168-82. doi: 10.1002/humu.21394. Epub 2011 Jan 25.

PMID:
21120952
11.

The 68 kDa subunit of mammalian cleavage factor I interacts with the U7 small nuclear ribonucleoprotein and participates in 3'-end processing of animal histone mRNAs.

Ruepp MD, Vivarelli S, Pillai RS, Kleinschmidt N, Azzouz TN, Barabino SM, Schümperli D.

Nucleic Acids Res. 2010 Nov;38(21):7637-50. doi: 10.1093/nar/gkq613. Epub 2010 Jul 15.

12.

Mammalian pre-mRNA 3' end processing factor CF I m 68 functions in mRNA export.

Ruepp MD, Aringhieri C, Vivarelli S, Cardinale S, Paro S, Schümperli D, Barabino SM.

Mol Biol Cell. 2009 Dec;20(24):5211-23. doi: 10.1091/mbc.E09-05-0389.

13.

Can a genetically-modified organism-containing diet influence embryo development? A preliminary study on pre-implantation mouse embryos.

Cisterna B, Flach F, Vecchio L, Barabino SM, Battistelli S, Martin TE, Malatesta M, Biggiogera M.

Eur J Histochem. 2008 Oct-Dec;52(4):263-7.

PMID:
19109102
14.

A soluble form of the receptor for advanced glycation endproducts (RAGE) is produced by proteolytic cleavage of the membrane-bound form by the sheddase a disintegrin and metalloprotease 10 (ADAM10).

Raucci A, Cugusi S, Antonelli A, Barabino SM, Monti L, Bierhaus A, Reiss K, Saftig P, Bianchi ME.

FASEB J. 2008 Oct;22(10):3716-27. doi: 10.1096/fj.08-109033. Epub 2008 Jul 4.

PMID:
18603587
15.

Hibernation as a far-reaching program for the modulation of RNA transcription.

Malatesta M, Biggiogera M, Baldelli B, Barabino SM, Martin TE, Zancanaro C.

Microsc Res Tech. 2008 Aug;71(8):564-72. doi: 10.1002/jemt.20587.

PMID:
18398834
16.

Subnuclear localization and dynamics of the Pre-mRNA 3' end processing factor mammalian cleavage factor I 68-kDa subunit.

Cardinale S, Cisterna B, Bonetti P, Aringhieri C, Biggiogera M, Barabino SM.

Mol Biol Cell. 2007 Apr;18(4):1282-92. Epub 2007 Jan 31.

17.

Distinct sequence motifs within the 68-kDa subunit of cleavage factor Im mediate RNA binding, protein-protein interactions, and subcellular localization.

Dettwiler S, Aringhieri C, Cardinale S, Keller W, Barabino SM.

J Biol Chem. 2004 Aug 20;279(34):35788-97. Epub 2004 May 28.

18.

Distinct roles of two Yth1p domains in 3'-end cleavage and polyadenylation of yeast pre-mRNAs.

Barabino SM, Ohnacker M, Keller W.

EMBO J. 2000 Jul 17;19(14):3778-87.

19.
20.

Last but not least: regulated poly(A) tail formation.

Barabino SM, Keller W.

Cell. 1999 Oct 1;99(1):9-11. Review. No abstract available.

21.
22.

The 30-kD subunit of mammalian cleavage and polyadenylation specificity factor and its yeast homolog are RNA-binding zinc finger proteins.

Barabino SM, Hübner W, Jenny A, Minvielle-Sebastia L, Keller W.

Genes Dev. 1997 Jul 1;11(13):1703-16.

24.

Antisense affinity depletion of RNP particles. Application to spliceosomal snRNPs.

Blencowe BJ, Barabino SM.

Methods Mol Biol. 1995;37:67-76. No abstract available.

PMID:
7780522
25.
26.

Mammalian nuclei contain foci which are highly enriched in components of the pre-mRNA splicing machinery.

Carmo-Fonseca M, Tollervey D, Pepperkok R, Barabino SM, Merdes A, Brunner C, Zamore PD, Green MR, Hurt E, Lamond AI.

EMBO J. 1991 Jan;10(1):195-206.

27.

Targeted snRNP depletion reveals an additional role for mammalian U1 snRNP in spliceosome assembly.

Barabino SM, Blencowe BJ, Ryder U, Sproat BS, Lamond AI.

Cell. 1990 Oct 19;63(2):293-302.

PMID:
2170025
28.

Mapping U2 snRNP--pre-mRNA interactions using biotinylated oligonucleotides made of 2'-OMe RNA.

Barabino SM, Sproat BS, Ryder U, Blencowe BJ, Lamond AI.

EMBO J. 1989 Dec 20;8(13):4171-8.

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