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Items: 45

1.

Understanding Admixture: Haplodiploidy to the Rescue.

Nouhaud P, Blanckaert A, Bank C, Kulmuni J.

Trends Ecol Evol. 2019 Nov 5. pii: S0169-5347(19)30272-1. doi: 10.1016/j.tree.2019.08.013. [Epub ahead of print] Review.

PMID:
31703819
2.

Environment changes epistasis to alter trade-offs along alternative evolutionary paths.

Hall AE, Karkare K, Cooper VS, Bank C, Cooper TF, Moore FB.

Evolution. 2019 Oct;73(10):2094-2105. doi: 10.1111/evo.13825. Epub 2019 Sep 12.

PMID:
31418459
3.

Renal control of disease tolerance to malaria.

Ramos S, Carlos AR, Sundaram B, Jeney V, Ribeiro A, Gozzelino R, Bank C, Gjini E, Braza F, Martins R, Ademolue TW, Blankenhaus B, Gouveia Z, Faísca P, Trujillo D, Cardoso S, Rebelo S, Del Barrio L, Zarjou A, Bolisetty S, Agarwal A, Soares MP.

Proc Natl Acad Sci U S A. 2019 Mar 19;116(12):5681-5686. doi: 10.1073/pnas.1822024116. Epub 2019 Mar 4.

4.

Evolution in the light of fitness landscape theory.

Fragata I, Blanckaert A, Dias Louro MA, Liberles DA, Bank C.

Trends Ecol Evol. 2019 Jan;34(1):69-82. doi: 10.1016/j.tree.2018.10.009. Epub 2018 Dec 21. Review.

PMID:
30583805
5.

In search of the Goldilocks zone for hybrid speciation.

Blanckaert A, Bank C.

PLoS Genet. 2018 Sep 7;14(9):e1007613. doi: 10.1371/journal.pgen.1007613. eCollection 2018 Sep.

6.

The fitness landscape of the codon space across environments.

Fragata I, Matuszewski S, Schmitz MA, Bataillon T, Jensen JD, Bank C.

Heredity (Edinb). 2018 Nov;121(5):422-437. doi: 10.1038/s41437-018-0125-7. Epub 2018 Aug 20.

7.

Conflict between heterozygote advantage and hybrid incompatibility in haplodiploids (and sex chromosomes).

Ghenu AH, Blanckaert A, Butlin RK, Kulmuni J, Bank C.

Mol Ecol. 2018 Oct;27(19):3935-3949. doi: 10.1111/mec.14482. Epub 2018 Feb 10.

8.

The Combined Effect of Oseltamivir and Favipiravir on Influenza A Virus Evolution.

Ormond L, Liu P, Matuszewski S, Renzette N, Bank C, Zeldovich K, Bolon DN, Kowalik TF, Finberg RW, Jensen JD, Wang JP.

Genome Biol Evol. 2017 Jul 1;9(7):1913-1924. doi: 10.1093/gbe/evx138.

9.

Storage time of platelet concentrates and all-cause bacteremia in hematologic patients.

Kreuger AL, Middelburg RA, Bank CMC, Beckers EAM, van Gammeren AJ, Leyte A, Rondeel JMM, de Vooght KMK, Weerkamp F, Zwaginga JJ, Kerkhoffs JLH, van der Bom JG.

Transfusion. 2017 Sep;57(9):2096-2103. doi: 10.1111/trf.14194. Epub 2017 Jun 26.

PMID:
28653425
10.

Two sides of the same coin: A population genetics perspective on lethal mutagenesis and mutational meltdown.

Matuszewski S, Ormond L, Bank C, Jensen JD.

Virus Evol. 2017 Mar 2;3(1):vex004. doi: 10.1093/ve/vex004. eCollection 2017 Jan.

11.

On the (un)predictability of a large intragenic fitness landscape.

Bank C, Matuszewski S, Hietpas RT, Jensen JD.

Proc Natl Acad Sci U S A. 2016 Dec 6;113(49):14085-14090. Epub 2016 Nov 18.

12.

An experimental evaluation of drug-induced mutational meltdown as an antiviral treatment strategy.

Bank C, Renzette N, Liu P, Matuszewski S, Shim H, Foll M, Bolon DN, Zeldovich KB, Kowalik TF, Finberg RW, Wang JP, Jensen JD.

Evolution. 2016 Nov;70(11):2470-2484. doi: 10.1111/evo.13041. Epub 2016 Sep 13.

PMID:
27566611
13.

On the importance of skewed offspring distributions and background selection in virus population genetics.

Irwin KK, Laurent S, Matuszewski S, Vuilleumier S, Ormond L, Shim H, Bank C, Jensen JD.

Heredity (Edinb). 2016 Dec;117(6):393-399. doi: 10.1038/hdy.2016.58. Epub 2016 Sep 21. Review.

14.

A Statistical Guide to the Design of Deep Mutational Scanning Experiments.

Matuszewski S, Hildebrandt ME, Ghenu AH, Jensen JD, Bank C.

Genetics. 2016 Sep;204(1):77-87. doi: 10.1534/genetics.116.190462. Epub 2016 Jul 13.

15.

Shift in prevalence of HPV types in cervical cytology specimens in the era of HPV vaccination.

Fischer S, Bettstetter M, Becher A, Lessel M, Bank C, Krams M, Becker I, Hartmann A, Jagla W, Gaumann A.

Oncol Lett. 2016 Jul;12(1):601-610. Epub 2016 Jun 1.

16.

Comparison between intraocular pressure spikes with water loading and postural change.

Chong CW, Wang SB, Jain NS, Bank CS, Singh R, Bank A, Francis IC, Agar A.

Clin Exp Ophthalmol. 2016 Dec;44(9):768-775. doi: 10.1111/ceo.12777. Epub 2016 Jul 11.

PMID:
27221762
17.

A Balance between Inhibitor Binding and Substrate Processing Confers Influenza Drug Resistance.

Jiang L, Liu P, Bank C, Renzette N, Prachanronarong K, Yilmaz LS, Caffrey DR, Zeldovich KB, Schiffer CA, Kowalik TF, Jensen JD, Finberg RW, Wang JP, Bolon DNA.

J Mol Biol. 2016 Feb 13;428(3):538-553. doi: 10.1016/j.jmb.2015.11.027. Epub 2015 Dec 4.

PMID:
26656922
18.

Thinking too positive? Revisiting current methods of population genetic selection inference.

Bank C, Ewing GB, Ferrer-Admettla A, Foll M, Jensen JD.

Trends Genet. 2014 Dec;30(12):540-6. doi: 10.1016/j.tig.2014.09.010. Epub 2014 Nov 19. Review.

PMID:
25438719
19.

A systematic survey of an intragenic epistatic landscape.

Bank C, Hietpas RT, Jensen JD, Bolon DN.

Mol Biol Evol. 2015 Jan;32(1):229-38. doi: 10.1093/molbev/msu301. Epub 2014 Nov 3.

20.

Influenza virus drug resistance: a time-sampled population genetics perspective.

Foll M, Poh YP, Renzette N, Ferrer-Admetlla A, Bank C, Shim H, Malaspinas AS, Ewing G, Liu P, Wegmann D, Caffrey DR, Zeldovich KB, Bolon DN, Wang JP, Kowalik TF, Schiffer CA, Finberg RW, Jensen JD.

PLoS Genet. 2014 Feb 27;10(2):e1004185. doi: 10.1371/journal.pgen.1004185. eCollection 2014 Feb.

21.

Genomics and the origin of species.

Seehausen O, Butlin RK, Keller I, Wagner CE, Boughman JW, Hohenlohe PA, Peichel CL, Saetre GP, Bank C, Brännström A, Brelsford A, Clarkson CS, Eroukhmanoff F, Feder JL, Fischer MC, Foote AD, Franchini P, Jiggins CD, Jones FC, Lindholm AK, Lucek K, Maan ME, Marques DA, Martin SH, Matthews B, Meier JI, Möst M, Nachman MW, Nonaka E, Rennison DJ, Schwarzer J, Watson ET, Westram AM, Widmer A.

Nat Rev Genet. 2014 Mar;15(3):176-92. doi: 10.1038/nrg3644. Review.

22.

A bayesian MCMC approach to assess the complete distribution of fitness effects of new mutations: uncovering the potential for adaptive walks in challenging environments.

Bank C, Hietpas RT, Wong A, Bolon DN, Jensen JD.

Genetics. 2014 Mar;196(3):841-52. doi: 10.1534/genetics.113.156190. Epub 2014 Jan 7.

23.

Shifting fitness landscapes in response to altered environments.

Hietpas RT, Bank C, Jensen JD, Bolon DNA.

Evolution. 2013 Dec;67(12):3512-22. doi: 10.1111/evo.12207. Epub 2013 Aug 2.

24.

The limits to parapatric speciation: Dobzhansky-Muller incompatibilities in a continent-island model.

Bank C, Bürger R, Hermisson J.

Genetics. 2012 Jul;191(3):845-63. doi: 10.1534/genetics.111.137513. Epub 2012 Apr 27.

25.

Hand hygiene in medical students: performance, education and knowledge.

Scheithauer S, Haefner H, Schwanz T, Lopez-Gonzalez L, Bank C, Schulze-Röbbecke R, Weishoff-Houben M, Lemmen SW.

Int J Hyg Environ Health. 2012 Sep;215(5):536-9. doi: 10.1016/j.ijheh.2012.02.009. Epub 2012 Mar 14.

PMID:
22424645
26.

Can reinforcement complete speciation?

Bank C, Hermisson J, Kirkpatrick M.

Evolution. 2012 Jan;66(1):229-39. doi: 10.1111/j.1558-5646.2011.01423.x. Epub 2011 Aug 28.

PMID:
22220877
27.

Schistosoma mansoni soluble egg antigens are internalized by human dendritic cells through multiple C-type lectins and suppress TLR-induced dendritic cell activation.

van Liempt E, van Vliet SJ, Engering A, García Vallejo JJ, Bank CM, Sanchez-Hernandez M, van Kooyk Y, van Die I.

Mol Immunol. 2007 Apr;44(10):2605-15. Epub 2007 Jan 22.

PMID:
17241663
28.

Specificity of DC-SIGN for mannose- and fucose-containing glycans.

van Liempt E, Bank CM, Mehta P, Garciá-Vallejo JJ, Kawar ZS, Geyer R, Alvarez RA, Cummings RD, Kooyk Yv, van Die I.

FEBS Lett. 2006 Nov 13;580(26):6123-31. Epub 2006 Oct 16.

29.

One-step biotinylation procedure for carbohydrates to study carbohydrate-protein interactions.

Grün CH, van Vliet SJ, Schiphorst WE, Bank CM, Meyer S, van Die I, van Kooyk Y.

Anal Biochem. 2006 Jul 1;354(1):54-63. Epub 2006 May 3.

PMID:
16713984
30.

Interaction of schistosome glycans with the host immune system.

van Die I, van Liempt E, Bank CM, Schiphorst WE.

Adv Exp Med Biol. 2005;564:9-19. No abstract available.

PMID:
16400801
31.

Molecular basis of the differences in binding properties of the highly related C-type lectins DC-SIGN and L-SIGN to Lewis X trisaccharide and Schistosoma mansoni egg antigens.

Van Liempt E, Imberty A, Bank CM, Van Vliet SJ, Van Kooyk Y, Geijtenbeek TB, Van Die I.

J Biol Chem. 2004 Aug 6;279(32):33161-7. Epub 2004 Jun 7.

32.

Vaccination-induced protection of lambs against the parasitic nematode Haemonchus contortus correlates with high IgG antibody responses to the LDNF glycan antigen.

Vervelde L, Bakker N, Kooyman FN, Cornelissen AW, Bank CM, Nyame AK, Cummings RD, van Die I.

Glycobiology. 2003 Nov;13(11):795-804. Epub 2003 Aug 7.

PMID:
12907692
33.

Schistosoma mansoni-infected mice produce antibodies that cross-react with plant, insect, and mammalian glycoproteins and recognize the truncated biantennaryN-glycan Man3GlcNAc2-R.

van Remoortere A, Bank CM, Nyame AK, Cummings RD, Deelder AM, van Die I.

Glycobiology. 2003 Mar;13(3):217-25. Epub 2002 Dec 17.

PMID:
12626421
34.

The dendritic cell-specific C-type lectin DC-SIGN is a receptor for Schistosoma mansoni egg antigens and recognizes the glycan antigen Lewis x.

van Die I, van Vliet SJ, Nyame AK, Cummings RD, Bank CM, Appelmelk B, Geijtenbeek TB, van Kooyk Y.

Glycobiology. 2003 Jun;13(6):471-8. Epub 2003 Feb 20.

PMID:
12626400
35.

Multiple deletions of mtDNA remove the light strand origin of replication.

Bank C, Soulimane T, Schröder JM, Buse G, Zanssen S.

Biochem Biophys Res Commun. 2000 Dec 20;279(2):595-601.

PMID:
11118331
36.

Molecular analysis of human anti-factor VIII antibodies by V gene phage display identifies a new epitope in the acidic region following the A2 domain.

van den Brink EN, Turenhout EA, Bank CM, Fijnvandraat K, Peters M, Voorberg J.

Blood. 2000 Jul 15;96(2):540-5.

PMID:
10887116
37.

Longitudinal analysis of factor VIII inhibitors in a previously untreated mild haemophilia A patient with an Arg593-->Cys substitution.

van den Brink EN, Timmermans SM, Turenhout EA, Bank CM, Fijnvandraat K, Voorberg J, Peters M.

Thromb Haemost. 1999 May;81(5):723-6.

PMID:
10365744
38.

Sulfated glycans on oral mucin as receptors for Helicobacter pylori.

Veerman EC, Bank CM, Namavar F, Appelmelk BJ, Bolscher JG, Nieuw Amerongen AV.

Glycobiology. 1997 Sep;7(6):737-43.

PMID:
9376676
39.

Diamine oxidase activity in amniotic fluid for diagnosis of ruptured membranes.

Bank CM, Offermans JP, Gijzen AH, Smits F, van Dieijen-Visser MP, Brombacher PJ.

Eur J Clin Chem Clin Biochem. 1991 Nov;29(11):743-8.

PMID:
1782281
40.

MRFIT after 10.5 years.

Rosborough TK, Bank CH, Cummings MK, Phillips PP, Pierach CA.

JAMA. 1990 Sep 26;264(12):1534-5. No abstract available.

PMID:
2395192
42.

The diagnostic value of neuron-specific enolase and carcino-embryonic antigen analyses in patients with carcinoma of the lung.

Wielders JP, Bartels CT, Bank CM, Meek JC, van Dieijen-Visser MP, Brombacher PJ.

J Clin Chem Clin Biochem. 1990 Apr;28(4):225-31.

PMID:
2162907
43.

Screening urine specimen populations for normality using different dipsticks: evaluation of parameters influencing sensitivity and specificity.

Bank CM, Codrington JF, van Dieijen-Visser MP, Brombacher PJ.

J Clin Chem Clin Biochem. 1987 May;25(5):299-307.

PMID:
3612028
44.

Differentiation of functional adrenoceptors in human and guinea pig airways.

Zaagsma J, van der Heijden PJ, van der Schaar MW, Bank CM.

Eur J Respir Dis Suppl. 1984;135:16-33.

PMID:
6203772
45.

Comparison of functional beta-adrenoceptor heterogeneity in central and peripheral airway smooth muscle of guinea pig and man.

Zaagsma J, van der Heijden PJ, van der Schaar MW, Bank CM.

J Recept Res. 1983;3(1-2):89-106.

PMID:
6304311

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